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in the digestive tract (stomach) what has co-evolved with humans?
helicobacter pylori
helicobacter pylori: (4)
colonized humans at least 100k ya (1/2-1/3 infected, declining in western populations)
considered a ‘dominant member of the human gastric microbiota’
an amphibiont bacteria - promotes/protects from pathology (theodor rosebury)
stomach cancer/ulcer/esophageal cancer
dhaka, bangladesh: (4)
‘order’ & ‘nature’ in the urban environment
dhaka - megacity (14 million ppl); 1 of 28 in the world
every year ~300,000-400,000 of bangladesh’s urban poor relocate to dhaka for employment and wages
as a result = massive rate of (unplanned) urbanization
in this megacity (dhaka, in a developing country) the concept of ‘order’ is challenged along 4 lines:
reliable access to water, food, housing
regular collection of waste
natural disasters (earthquakes/flooding)
urban hazards (fires, car accidents, crime and violence)
2 examples of hazardous/order issues in dhaka:
raza plaza; 2013, garment factory collapse - 1129 dead and 2515 injured (most workers - women/children)
nimtali, old dhaka; 2010, fire in apartment building - fire trucks could not even access the site, streets too narrow, no fire escapes (building infrastructure issues) left 124 dead
dhaka is said to have a proliferation of…
shanty towns - some established and others ephemeral (coming and going)
dhaka: the problem and the response
the problem: lack of a reliable water supply (even piped water access relies on electricity)
the response: to store water
stored water is an issue because?
its an opportunity for aedes aegypti - clean still water as an ideal breeding grounds
recommendation for dhaka:
to make stored water ‘safe’ (changing water, scrubbing vessels, using lids)
a. sultana (2014) (masters thesis investigating dhaka’s dengus problem): the main problem and theme
problem: underestimating the risk of dengue
theme: contextualizing dengue: daily stressors - forget about dengue listen to our sufferings (dengue - not a current stressor, consider daily life; we’re worried about building collapses, gridlock, fires, etc. dengue is way lower on the list)
2nd theme in dhaka (masters thesis):
dengue - a disease of 8-10 years ago; there is no news of dengue deaths anymore, 8-10 years back dengue is as the headline of every newspaper now we hardly see mention in the news about people dying of dengue, and if we do, they are not even in our country - i think 8-10 years ago dengue was a killer disease in our country too, but it is at least not a killer disease anymore
3rd theme in dhaka (masters thesis):
dengue and the language of virus jor:
dengue naming practices where virus jor means the common fever “with or without medicine, virus jor will be cured in seven days
the meaning of surviving dengue; my family was scared but i was not; i felt i was important/special
not recognizing classic dengue fever versus dengue hemorrhagic fever
dengue hemorrhagic fever in short:
involves liver dysfunction, lack of blood clotting, much more serious disease
dengue risks in dhaka:
are connected to massively growing, unplanned urbanization
dengue in dhaka: the crux of the problem & remediation
crux: the need to store water
remediate: establish
a water supply (in a megacity) (also in rural areas - irrigation of crops and aedes albopictus breeding - find this ecology particularly useful)
plague’s delicate balance review:
the microbe
the reservoirs & host(s)
the vector(s)
bubonic plague bacterium: (4)
yersinia pestis: isolated in 1894 by alexandre yersin (named after him)
DNA sequencing suggests: bacterium have evolved over time (various gains/losses of DNA), but only seemed to become lethal ~1,500 ya (previously it was a gastrointestinal bug)
evidence suggests yersinia pestis arose in asia
spread and likely present, e.g., in parts of africa for last 2000 years
plague’s 2 epidemiological settings:
sylvatic (wild) plague
urban (domestic) plague
sylvatic plague:
aka wild plague; typically circulates among rodents resistant to infection (tolerant of plague bacterium)
urban plague:
aka domestic plague; involves humans and commensal rodents
black death transmission:
vector-borne transmission (via flea) (often but not always)
2 important resistant rodents in the black death:
voles (field mice)
deer mice
both important reservoirs of plague bacillus in animal populations
describe examples of each in the image above:
vector (flea most typically) —> reservoir (rodents) —> incidental (ground hogs/prairie dogs/squirrels) —> commensal & domestic (cats and dogs) —> humans
prairie dogs and plague:
are incidental hosts which are particularly vulnerable to plague bacterium (yersinia pestis) - die very easily when infected
rat-borne epidemics:
account for many human plague epidemics
for humans (rat borne epidemics):
rattus rattus (the black rat, ship rat, roof rat)
rattus rattus: (4)
found throughout the world as a human commensal but… it is a species which can MOVE BETWEEN sylvatic and urban systems
this makes control efforts difficult (both environments are hospitable)
probably native to asia but established a very wide distribution (ship rat - comfortable on ships, how it got its name)
high producer: breeds all year long, 3-5 litters/year, average of 6-10 offspring per litter
yersinia pestis originally evolved where?
in asia… and moved around with human activity
how did yersinia pestis make it to north america?
plague entered north america in ~1900: west coast port cities (through rat infested ships)
how did plague venture inland in north america (how did it cross the rockies?): (3)
coastal prairie dogs died in large numbers (entire populations wiped out)
farmers on the other side of the rockies/inland travelled to the rockies to get some sick prairie dogs to ‘eliminate’ more prairie dogs back home (better for farming…)
this propagated the movement of plague bacterium into the rest of north america
last known rat borne epidemic in north america:
occurred in LA in 1924-25
does plague still exist in north america?
currently, north america = sporadic outbreaks, through contact with rodent reservoirs and incidental hosts - plague is out there in nature!
transmission in bubonic plague:
there are 3 important vectors to consider: all fleas
3 flea vectors of bubonic plague and who they affect primarily:
xenopsylla cheopis: important in infecting black rats - historically valuable
pulex irritans: infected humans and farm animals - less common today
oropsylla montana: infects squirrels/prairie dogs - most important vector in america