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Starts at lecture 10/30 Parasitism/Infectious disease
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Parasite
An organism that lives in or on another organism, which consumes host resources or causes harm to the host
Pathogen
A parasite that causes disease
Endo vs Ectoparasites
Endoparasites live inside an organism, ecto lives outside
Intracellular vs intercellular parasites
Intra- live inside of cells of host
Inter- live in spaces between cells of hosts
Example of inter and intracellular parasites
Intercellular - tapeworms and flatworms
Intracellular - Viruses, protozoans (malaria)

1 and 3
Reservoir for SARS-CoV-2
Horseshoe bats
Parasites vs parasitoids
Parasitoids always kill their host, parasites do not always kill the host
Horizontal vs vertical transmission
Horizontal transmission: Parasite moves between individuals other than parent and offspring
Vertical: Parasite is passed down from parent to offspring
Vector
Organism that disperses parasites between hosts, such as a mosquito distributing malaria
What 4 factors influence host infection?
Mode of entry (through a break in outer barrier, airborne, etc.)
Host range of parasite (number of hosts, options for pathogen survival)
Existence of reservoir species
Evasion of host immune system

1, 2, and 3
Susceptible, Infected, Resistant (SIR) model
The simplest model of infectious disease transmission that incorporates immunity
In the SIR model, g is _______
rate of transmission
In the SIR model, b is _________
rate of recovery
R0 >1
Epidemic/pandemic spread
R0<1
No epidemic

Label these as susceptible, recovered, and infected
Blue - susceptible, red = infected, grey = recovered
Herd immunity threshold
Ph>1-(1/R0), Ph = fraction immunized
Host adaptations to combat parasites
Immune system
Mechanical/biochemical defenses
Medicine
Coevolution
When 2 species evolve in response to each other
Intraspecific competition
Occurs within individuals of the SAME species
Interspecific competition
Occurs between individuals of DIFFERENT species
When would intraspecific competition usually occur?
When resources are limited
Resource
Anything an organism consumes that causes an increase in population growth rate when it becomes more available
Liebig’s law of the minimum
Population increase is limited by resource that is the least available

Yield grows but growth slows and eventually stops
Competitive exclusion principle
Two species can’t coexist indefinitely if they use and are limited by the same resource
More related species experience _________ competition
Stronger/ more intense

D

Label parts of the equation
r1= growth rate of species 1, N1= population size, K=carrying capacity, alpha= competition coefficient for species 1
What factors can affect coexistence/ the ability to compete well?
Abiotic conditions, such as tides
Disturbances - forest fires
Interactions with other species, such as predation and herbivory
Exploitative competition
When individuals drive down the abundance of a resource so that others have more difficulty surviving and reproducing
Interference competition
When individuals compete directly with each other for resources
Apparent competition
When two species have a negative effect on each other through the presence of an enemy, such as a predator or parasite
Aggressive interactions
A form of interference competition
Allelopathy
When organisms use chemicals to harm competitors, such as when bacteria secrete antimicrobial substances to kill other competitors
Apparent competition example
Pheasant and partridge competition from parasite eggs, ants in devils gardens

I and II
Generalists
Types of mutualists where species interact with many other species
Specialists
Types of mutualists where species interact with only one or a few closely related species
Obligate mutualists
Require each other for persistence
Facultative mutualists
Species where the interaction is not critical to the persistence of either species
Zooxanthellae
Photosynthetic mutualistic algae that live within coral
Mycorrhizal fungi
Fungi that surround plant roots to help them get nutrients, such as water and minerals
Endomycorrhizal fungi
fungi whose hyphae penetrate root cells between cell walls and the cell membrane
Ectomycorrhizal fungi
Hyphae surround the plant roots and enter between cells but not commonly into cells
Arbuscular mycorrhizal fungi
Fungi that are endomycorrhizal and infect many trees and grasses

mutualists
Yucca moths and pollination
Yucca moths lay eggs within the flower, pollinating them in the process but too many eggs per flower leads to reduced productivity
Mutualisms between plants and animals
Animals eat fruit of plants, help to disperse their seeds
Some animals are pollinators
Positive to negative interactions
Interactions that were initially mutualism can shift to predation or parasitism if one species no longer receives a benefit
Cheating
When one species in a mutualism receives a benefit but doesn’t provide one

B
Ecotone
Boundary created by sharp differences in environmental conditions over a short distance, also accompanied by major changes in species composition
Interdependent communities
Species abundance is positively linked
Independent communities
Species abundance is not positively linked
Removing a species from an independent community would have what effect on other species?
Either negligible or positive effect on other species

II and III
Species richness
Number of species in a community
Relative abundance
Proportion of individuals in a community represented by each species
Rank abundance curve
Curve that plots relative abundance of each species from most to least abundant
Species evenness
Difference in relative abundances between species in a community

decreasing number of species sampled
Why does species richness decline with increased habitat fertility?
Increased habitat fertility promotes the growth of the most dominant competitors
How does higher habitat diversity affect species diversity?
Increases proportionately
Keystone species
A species whose presence affects the abundance of other species in the community significantly
Ecosystem engineers + example
A keystone species that affects communities by influencing habitat structure, ex. beavers
Food chain vs food web
Food chain: linear relationship between feeding of organisms
Food web: links that represent multiple feeding relationships
Trophic level
Feeding level in a food web, ex. producers/consumers
Tertiary consumers
Apex predators
Secondary consumers
Mesopredators
Primary consumers
Herbivores
Guild
Species that feed on similar items within a level
Direct effects (food web)
Interactions between species that do not involve other species
Indirect effects (food webs)
Interactions that involve one or more intermediate species
Trophic cascade
Indirect effects in a community initiated by either a predator (top-down) or producer (bottom-up)
Trait mediated indirect effect + example
An indirect effect caused by changes in traits of an intermediate species, such as behavior
Example = grass + grasshopper + nonlethal spider, spider causes change in behavior of grasshoppers to avoid potential predation
Bottom-up control
When abundance of trophic groups is determined by the energy produced by produces
Top-down control
Abundance of trophic groups is determined by predators at the top of the food web
Community stability vs resistance vs resilience
Stability: ability of a community to maintain structure
Resistance: amount a community can resist change after a disturbance
Resilience: how quickly a community can return to its original state after a disturbance
Alternative stable state
After a disturbance, a community can form a new community structure that is resistant to change
Succession
Change in species composition over time
Seral stage
an immediate stage found in an ecological succession
Pioneer species
Earliest to arrive at a site in an ecological succession
Climax community
Final seral stage in an ecological succession
Chronosequence
Sequence of communities that exist at a given location over time
Ways of observing succession
Directly observing changes over time
Examining pollen in sediment and layers/ lakes
Primary succession + example
Development of communities within habitats that are initially devoid of plants and organic soil
Ex. lava flows
Secondary succession
Development of communities in disturbed habitats that have no plants but do have organic soil
Glacier retreat often leads to _________ succession and wildfires lead to __________ succession.
Primary, secondary
Properties of intertidal community successions
Succession occurs rapidly since dominant species have a short generation time
Stream succession properties
Streams have rapid succession since organisms can easily move downstream after a disturbance or to areas where a disturbance occurred, ex. invertebrates moving to a flooded area
How does lake succession occur?
Open lake experiences a drought
Plants colonize newly exposed sediment
Drought ends and plants are brought to the lake surface
Peat fills the lake basin eventually
What does a succession productivity curve look like in terms of species richness?
Rapid increase in species diversity at first
Small plateau
Small decline

Label A and B as either late or early succession (slow or fast)
a= early succession, b= late succession
Facilitation (succession)
Mode of succession in which one species increases the chances of a second species becoming established
Inhibition (succession)
One species decreases the chances of another species becoming established
Tolerance (succession)
Species do not alter the environment in ways that affect other species chances of establishment
Priority effect (succession)
Arrival of species at a site affects the colonization/establishment of other species