Development lecture 4

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38 Terms

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Organiser grafts showing inductin

Experiement: graft tissue from the dorsal side ontot hte ventral side

Result: Induction of a secondary axis

<p>Experiement: graft tissue from the dorsal side ontot hte ventral side</p><p></p><p>Result: Induction of a secondary axis</p>
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Where does the information come from?

  1. From outside→ environmental factors (gravity, sperm entry point)

  2. From inside→ maternal determinants put into egg cell

  3. From outside→ cells signal to each other (induction)

    • after having been made different by maternal determinants

kidney

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But how to find the machinery needed for induction

  • Need to find the different signalling pathways and regulatorys of gene expression

→ Genetic screen→ to find zygotic genome stuff

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some definitions for the experiemnt

  • DTS→ dominant temperature sensitive

    • 29 degrees→ kills flies or makes them infertile

    • easy way to get id of DTS carrying progeny

  • b→ balancer chromosome

    • lethal when homozygous and with clear markers

      • e.g beta-gal or GFP expression

      • or → curly wings for adults

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How do this?

  1. Treat a male with mutagen (EMS) (a/a)→ to form a* mutation sperm

  2. Cross with a DTS/b female→ viable at 29 degrees

  3. approx 5000 individual males outcrossed→ no. required for saturation of chromosome with mutations

    • i.e the mutant sperm from og fly→ mutant flies cross with more DTS/b female

  4. Grow this F1 progeny→

    • b/b is embronicaly lethal

    • DTS/b and a*/DTS dead at 29 degrees

    • a*/b and a*/b mmale nad female surive!

  5. Cross these a*/b x a*/b

    Result:

    • a*/a*→ embryonic lethal (with pattern defect?? that can be studied)

    • a*/b→ heterozygous viable shock

    • b/b→ embryonic lethal

<ol><li><p>Treat a male with mutagen (EMS) (a/a)→ to form a* mutation sperm</p></li><li><p>Cross with a DTS/b female→ viable at 29 degrees</p></li><li><p>approx 5000 individual males <strong>outcrossed</strong>→ no. required for saturation of chromosome with mutations</p><ul><li><p>i.e the mutant sperm from og fly→ mutant flies cross with more DTS/b female</p></li></ul></li><li><p>Grow this F1 progeny→ </p><ul><li><p>b/b is embronicaly <strong>lethal</strong></p></li><li><p>DTS/b and a*/DTS dead at <strong>29 degrees</strong></p></li><li><p>a*/b and a*/b mmale nad female surive!</p></li></ul></li><li><p>Cross these a*/b x a*/b</p><p>Result:</p><ul><li><p>a*/a*→ embryonic lethal (with pattern defect?? that can be studied)</p></li><li><p>a*/b→ heterozygous viable shock</p></li><li><p>b/b→ embryonic lethal</p></li></ul></li></ol><p></p>
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What does the a*/a* show?

  • Denticle patterns that develop on the ventral of each segment of larvae

  • Used to look for aberrations in the normal pattern of development

→ THEREFORE→ find genes for each place in the larvae??

<ul><li><p><strong>Denticle patterns</strong> that develop on the ventral of each segment of larvae</p></li><li><p>Used to look for aberrations in the normal pattern of development</p></li></ul><p>→ THEREFORE→ find genes for each place in the larvae??</p>
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What ere the three patterns they found and their genes?

knowt flashcard image
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What are denticles used for?

  • feed

  • for larva to crawl on substrate in peristalsis

<ul><li><p>feed </p></li><li><p>for larva to crawl on substrate in peristalsis</p></li></ul><p></p>
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Therefore what did the mutants screens show?

  • mutations that disrupt this pattern

  • discovered gene beeded for normal development

and THEREFORE

→ Could show the gene encoded for:

  • elements of signalling pathways

    and

  • regulatory networks controlling gene expression

<ul><li><p>mutations that disrupt this pattern </p></li><li><p>discovered gene beeded for normal development</p></li></ul><p>and THEREFORE</p><p>→ Could show the gene encoded for: </p><ul><li><p><strong>elements of signalling pathways </strong></p><p>and </p></li><li><p><strong>regulatory networks controlling gene expression</strong></p></li></ul><p></p>
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Example of a mutant screen

  • found a gene for wingless signalling pathway

→ found many factors required to build larvae

<ul><li><p>found a gene for wingless signalling pathway</p></li></ul><p>→ found many factors required to build  larvae</p><p></p>
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Why this was important in overal research of development

  • toolkit is largely conserved

  • same genes used to built a fly could build a fish

→ therfore→ studing fly found many basic mechanisms to contruct humans

  • why model organisms are really useful!

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How did these mutatns interact with eachother

Formed a hierachy

→ showed that from intiail egg polarity→ gradual incrase in complexity to divide up the embryp into a large number of repeating units

<p>Formed a hierachy</p><p>→ showed that from intiail egg polarity→ gradual incrase in complexity to divide up the embryp into a large number of repeating units</p>
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How is the gene expression regulated

Expression of eve stripe 2:
Respressor→ giant and Kruppel

Promotor→ bicoid and hunchback

Result→ get a peak of eve when there is low giant and kruppel but also high bicoid and hunchback

Overall: different cobinations of promotors and repressors→ to narrow down the effect of a specific region

<p>Expression of <strong>eve stripe 2</strong>:<br>Respressor→ giant and Kruppel</p><p>Promotor→ bicoid and hunchback</p><p></p><p>Result→ get a peak of eve when there is low giant and kruppel but also high bicoid and hunchback</p><p></p><p>Overall: different cobinations of promotors and repressors→ to narrow down the effect of a specific region</p>
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Example of conserved genes in Drosophila to vertebrates

Drosophila→ hegdeghog

  • mutant→ embryo has a prickly pattern on dentricles

  • encodes a diffusable signalling molcule needed for patterning the segment

Vertebrate→ sonic hedgehog

  • homolgous gene

  • key signalling molecules for vertebrate embryos

    • e.g central nervous system

    • limbs

<p>Drosophila→ <strong>hegdeghog</strong></p><ul><li><p>mutant→ embryo has a prickly pattern on dentricles</p></li><li><p>encodes a diffusable signalling molcule needed for patterning the segment</p></li></ul><p>Vertebrate→ <strong>sonic hedgehog</strong></p><ul><li><p>homolgous gene</p></li><li><p>key  signalling molecules for vertebrate embryos</p><ul><li><p>e.g central nervous system </p></li><li><p>limbs</p></li></ul></li></ul><p></p>
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Sonic Hedgehog in developing limb of a chick embryo (or mouse/human)

  • In situ hybridisation dark staning→ shows SONIC HEDGHOG transitps

  • expressed by cells at the posterior margin of the limb bud

  • so Sonic hedgehog diffused anterioroly as a graded signal

→ This is critical for patterning of the limb in this axis!

<ul><li><p>In situ hybridisation dark staning→ shows SONIC HEDGHOG <strong>transitps</strong></p></li><li><p>expressed by cells at the posterior margin of the limb bud</p></li><li><p>so Sonic hedgehog diffused anterioroly as a graded signal</p></li></ul><p>→ This is critical for patterning of the limb in this axis!</p><p></p>
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So we know have information in the cytoplasm that regualted zygotic genes to lay out he ground plan for the embryo but now…

…We need additional mechanism which assign cells to particular pathways of differentiation bthe position that they have been assigned to!

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The question to answer is

How do cells interpret positional information in the developing embryo?

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French flag Model

  1. Organisms develop into groupd (fields), separated by boundaries (which is controlled by what is above)

  2. Each field will be dedicated to making a part of the final strucutre e.g arm or leg→ they have gene unlcoked for specific parts

  3. Fields generate information about the position→ A gradient of a diffusible substance established between the boundaries

  4. Cells the assess their position by reference to the local level of the gradient→ differentiate accordingly

  5. All fields generate the same information BUT cells of each field have access to a different part of the genetic programme!→ so the same gradient does not mean the same limb will be generated

<ol><li><p>Organisms develop into groupd (fields), separated by boundaries (which is controlled by what is above)</p></li><li><p>Each field will be dedicated to making a part of the final strucutre e.g arm or leg→ they have gene unlcoked for specific parts</p></li><li><p>Fields generate information about the position→ A gradient of a<strong> diffusible substance </strong>established between the boundaries</p></li><li><p>Cells the <strong>assess</strong> their position by reference to the local level of the gradient→ <strong>differentiate accordingly</strong></p></li><li><p>All fields generate the same information <strong>BUT</strong> cells of each field have access to a different part of the genetic programme!→ so the same gradient does <strong>not</strong> mean the same limb will be generated</p></li></ol><p></p>
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Even though the positional information across the field is the same

  • Different fields have access to different parts of the genome

This is why→ in the diagram→ yess the positional information is the same→ so forms a flag of three colours in the same positions

BUT

  • Because the fields are different in each, the have access to different parts of the genome

  • → OVERALL: make different colours→ different flags!

<ul><li><p>Different fields have access to different parts of the genome</p></li></ul><p>This is why→ in the diagram→ yess the positional information is the same→ so forms a flag of three colours in the same positions</p><p></p><p>BUT</p><ul><li><p>Because the fields are different in each, the have access to different parts of the genome</p></li><li><p>→ OVERALL: make different colours→ different flags!</p></li></ul><p></p>
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Overall two aspects of patterns which are working

  1. Original field genetic assignments

  2. Positional information

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Example of evidence for this

  • The limb development of the chick

Why this is good evidence

→ the development of chick and mouse limbs are similar-. very ancient pathways!!

<ul><li><p>The limb development of the chick</p></li></ul><p>Why this is good evidence</p><p>→  the development of chick and mouse limbs are similar-. very ancient pathways!!</p>
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Axis of the chick limb

  1. Proximal to Distal (closest to body→ away from the body)

  2. Anterior→ Anterior

  3. Dorsal→ Ventral

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Testing French flag Model→ Prediction

Two fields of cells making different flags will have the same positional information

THEREFORE we predict

  • Cells from one group transplanted to the other

  • Will read new position

  • Differentiate appropriately

BUT

  • STILL following the programme to which they have previsouly been assigned

<p>Two fields of cells making different flags will have the<strong> same positional information</strong></p><p><strong>THEREFORE we predict</strong></p><ul><li><p>Cells from one group <strong>transplanted</strong> to the other</p></li><li><p>Will <strong>read new position</strong></p></li><li><p>Differentiate appropriately</p></li></ul><p><strong>BUT</strong></p><ul><li><p>STILL following the programme to which they have previsouly been assigned</p></li></ul><p></p>
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E.g explanation of this

  1. Part of bottom unition flag put in top of french flag

  2. Read its new position

  3. STILL develops as a union flag

  4. BUT→ as the top of the flag, instead of the bottom

<ol><li><p>Part of bottom unition flag put in top of french flag</p></li><li><p>Read its new position</p></li><li><p>STILL develops as a union flag</p></li><li><p>BUT→ as the <strong>top</strong> of the flag, instead of the bottom</p></li></ol><p></p>
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Actual experimental evidence of this in chicks!

Experiment

  1. Proximal leg

  2. put into

  3. Distal wing

Result:

  • Forms distal leg

→ Matches new position but develop as ind limb

Conclusion:

  1. cells are assigned in groups to make different parts of the organism

  2. psotional information in each group in the same→ must be universal cues but genetic code they have access to is different

<p>Experiment</p><ol><li><p>Proximal leg </p></li><li><p>put into</p></li><li><p>Distal wing</p></li></ol><p></p><p>Result:</p><ul><li><p>Forms <strong>distal leg</strong></p></li></ul><p>→ Matches new position <strong>but </strong>develop as ind limb</p><p></p><p>Conclusion:</p><ol><li><p>cells are assigned in groups  to make different parts of the organism</p></li><li><p>psotional information in each group in the same→ must be universal cues <strong>but </strong>genetic code they have access to is different</p></li></ol><p></p><p></p>
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Next question to ask

Hows is this positional information generated?

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How are elements laid down in a proximal to distal sequence: the zones

  • Progress Zone→ region of dividing cells at tip of limb bud

  • Apical ectodermal ridge (AER)→ most distal layer of ectodermal cells

    • The most distal region!

<ul><li><p><strong>Progress Zone</strong>→ region of dividing cells at tip of limb bud</p></li><li><p><strong>Apical ectodermal ridge (AER)</strong>→ most distal layer of ectodermal cells </p><ul><li><p>The most distal region!</p></li></ul></li></ul><p></p>
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How do cells position in the porximo-disstal axis

  • Measuring the time they spend in a region of dividing cells at the tip of the limbs

    progress zone

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Evidence for this?

  • Removes the Apical ectodermal region at different time intervals

Results:

  • development of the limb stopped at different stages of development

Conclusion:
- once leaves the progress zone, stop dividing and differentiate, laying down elements of the pattern in a proximo-distal sequence

<ul><li><p>Removes the Apical ectodermal region at different time intervals</p></li></ul><p>Results:</p><ul><li><p>development of the limb stopped at different stages of development</p></li></ul><p>Conclusion:<br>- once leaves the progress zone, stop dividing and differentiate, laying down elements of the pattern in a proximo-distal sequence</p><p></p>
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What happened if transplanted an AER from a mouse?

  • Recovered the limbs

→ shows conserved mechanism!

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What in the Apical Ectodermal Region maintains proliferation?

Fibroblast Growth Factors (FGFs)

→ The more distal the part of the limb→ the most time it has spent in the AER

<p>Fibroblast Growth Factors (FGFs)</p><p></p><p>→ The more distal the part of the limb→ the most time it has spent in the AER</p>
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How we know the FGFs do this?

  • Even if AER is removed

  • the FGFs are sufficent to elicit cell division

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How is Antero-posterior axis patterned?

  • Layed down by measuring their position to the zone of polarising activity ZPA

    • This is the posterior region

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What does the ZPA do to cause these patterned?

  1. Generates a gradient of a substance

  2. Diffuses across the limb

  3. cells respond according to their level in the gradient

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Experiemnts to show this

Transplanting the Zone of Polarising Activity ZPA

  1. Add extra ZPA to the anterior margin

    → Cell differentiate to make mirror image duplication of the posterior digits

  2. Add small amount to the anterior margin

    → Get a duplication of the small anterior limb but not symmetric→ does not reach high enough levesl to form another posterior type part of the limb

<p>Transplanting the Zone of Polarising Activity ZPA</p><ol><li><p>Add extra ZPA to the anterior margin</p><p>→ Cell differentiate to make <strong>mirror </strong>image duplication of the posterior digits</p></li><li><p>Add small amount to the anterior margin</p><p>→ Get a duplication of the small anterior limb but not symmetric→ does not reach high enough levesl to form another posterior type part of the limb</p></li></ol><p></p>
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What we now know is the gradient signal

→ Sonic Hedgog synthesised by the cells in this region

<p>→ Sonic Hedgog synthesised by the cells in this region</p>
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However we now know the two signalling centres that organise limb bud development and what variable they are based on

Poximo-distal

  • FGFs from the AER

  • time based

Antero-posterior

  • Shh from ZPA

  • spatial based

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Parasite in frog→ example of limbs buds behaving like self-organised organs

  • Example of how one mutation/paraite

  • Can cause rise of self-contained organised limb

WHY?→ limb buds have features of self-organising organs

<ul><li><p>Example of how one mutation/paraite</p></li><li><p>Can cause rise of self-contained organised limb</p></li></ul><p>WHY?→ limb buds have features of <strong>self-organising organs</strong></p><p></p>