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Biogeography
The geographic distribution of living organisms
Common Ancestry
The concept that if you trace back the lineages of living species far enough in time, those species will converge to a shared ancestor
Evolution
The change in frequency of genetic variants in a population
Homology
Traits whose similarities are explained by common ancestry
Natural Selection
The tendency for genetic variants that enhance fitness to go to fixation and variants that reduce fitness to be lost from populations (survival of the fittest)
Nested Hierarchy
A pattern of groups nested within groups (without overlaps) as seen in taxonomies and classification systems
Taxonomies
Systems for classifying organisms based on shared characteristics and evolutionary relationships.
Polymorphism
The existence of multiple variants within a population
Transitional Fossil
Fossil taxa that have some, but not all, of the derived traits of a living group
Allele Frequency
The proportion of all alleles at a locus that are of a particular type
Allele
A variant of a gene
Diploid
Having two sets of chromosomes
Evolution
Change in the genetic composition of a population over time (change in allele frequencies)
Fixed
An allele that has a frequency of 1.0 in a population
Genotype
Genetic makeup of an organism
Haploid
The trait of having one set of chromosomes in an organism
Hardy Weinberg Law
The law used to predict the genotype frequencies in a population for the next generation, based on the allele frequencies in the current generation
Locus
A place in the genome where alleles reside; in diploids, each individual has two alleles per locus
Phenotype
The physical and behavioral characteristics of an organism that result from the interaction of the organism’s genotype and its environment
Polymorphic
When more than one allele is found at a given locus in a population
Populations
A group of inbreeding organisms
Selfing
When an organism reproduces with itself, providing both the egg and sperm components
Beneficial mutation
A new allele that ENHANCES the fitness of an organism
Deleterious mutation
A new allele that DECREASES the fitness of an organism
Directional selection
Selection that arises when one allele consistently raises fitness, eventually leading to fixation of that beneficial allele
Mutation
A change in a gene sequence
Neutral mutation
A new allele with neither a beneficial nor a deleterious effect
Relative fitness
The fitness of a given genotype divided by the fitness of a reference genotype that is assigned to be 1.0
Genetic bottleneck
The phenomenon in which a population lineage shrinks to a small size for a period of time, causing that population to lose genetic variation
Genetic drift
RANDOM changes in allele frequencies in a population over time
Genetic load
The frequency of deleterious alleles that have accumulated in a population
Fitness
The expected reproductive output of a genotype
Genetic Disorders
Diseases caused by changes at a single genetic locus that reduce fitness
Branch
The lines that make up a tree diagram that represent population lineages
Clade
All the descendants of a single ancestral lineage
Lineage splitting
A splitting of a population into genetically separate populations that no longer have gene flow
Node
Branching points of tree diagrams that represent lineage splitting
Phylogenic tree
A branching diagram used to represent evolutionary relationships and relatedness between different organisms based on their common ancestry
Pruning
Removing tips/taxa or clades from a tree without changing the topology
Root
The base of the tree that represents the common ancestral lineage of all taxa in the tree
Speciation
Lineage splitting that leads to taxa being classified as separate species
Taxon (plural = taxa)
A named group of biological organisms at the tips of a tree
Tree thinking
The ability to use the metaphor of a phylogenetic tree to convey accurate evolutionary information
Tree topology
A list of all the clades that a tree contains