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Required micronutrients
Co, Cu, Mn, Mo, Ni, Z
Growth factors
vitamins, amino acids, blood, serum
Nutritional wild typ
phototroph
Auxotroph nutritional type
deficient in a metabolic pathway
Defined (synthetic, minimal) media
requirements for fastidious bacteria
generation time
doubling time; length of time for a cell to divide
lag phase
temporarily no growth, acclimating, turning on/off genes, synthesis
factors affecting lag phase:
inoculum age, size, media, physical factors
log phase
most metabolically active state, fastest growth, cell size increases
late log phase
begins slow down in growth
stationary phase
nutrient limited, growth rate = death rate, cell size decreases, stress response
death phase
lack of nutrients and pH changes → exponential decline in cell numbers
dormancy/persistence
growth arrested cells that remain viable; maintain membrane potential to provide energy
fed-batch culture
feed additional nutrients at mid-log phase
biofilm development
occurs in stages via chemical/environmental signals
biofilm initiation
planktonic cells (free swimming)
biofilm attachment
fimbriae; swimmers → stickers
biofilm maturation
exopolysaccharide formation
biofilm maintenance
2D → 3D growth; biofilm towers
biofilm dissolution
breakdown; triggered by starvation; stickers → swimmers
quorum sensing
cellular communication triggers formation of exopolysaccharide from microcolony forming extracellular matrix of molecules
quorum sensing requirement
nutrient driven and cell density dependent
endospore formation
response to environmental stress
Bacillus endospores
aerobic
Clostridium endospore
obligate anaerobes
spore germination
in favorable conditions
sporulation
8 hour genetic process directing asymmetrical division to form a spore
unequal compartments during sporulation form:
mother cell & forespore
thick spore coat made of:
peptidoglycan
endospore formation: 1. DNA replication
axial filament formation & segregation
endospore formation 2. septum formation
forespore and mother cell form, each with DNA copy
endospore formation 3. mother cell engulfs forespore
thick spore coat forms
endospore formation 4. spore released
dipicolinic acid and calcium incorporated