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normal bacterial flora are referred to as _
commensals
benefits of normal flora (4)
minimizes survival of invaders
secretes antimicrobial susbtances
stimulates immune development
source of nutrients for the gut
when do friendly bacteria become foes
when the microbe is displaced and enters a sterile site
loss of balance
impaired host immunity
characteristics of medically important bacteria
-grows somewhere it shouldn't
-causes disease
methods to classify bacteria based on phenotype (4)
gram stain/morphology
growth requirements
biochemical reactions
serological methods
genotypic methods of classifying bacteria (3)
phylogenetic tree
rRNA sequencing
molecular subtyping
KOH test identifies _
fungal microbes
acid-fast staining is used to identify
Mycobacterium species
india ink stain is used to identify _
cryptococcus
main difference between gram negative vs gram positive bacteria
peptidoglycan + outer membrane presence
anaerobic bacteria produce energy via _
fermentative pathways
organisms that preferentially use oxygen for metabolism, but may rely on anaerobic respiration
facultative anaerobes
aerotolerant anaerobes relationship to oxygen
unaffected by presence of oxygen
blood agar tests for organism's ability _
to hemolyze RBCs in the media
alpha hemolysis
partial hemolysis
beta hemolysis
complete hemolysis
gamma hemolysis
no hemolysis
all _ species are catalase positive
staphylococcal species
blood agar is used to study which bacteria?
streptococci
catalase positive bacteria produces _ when placed in _
water and O2 ; hydrogen peroxide
if catalase is negative, consider _ bacteria
streptococcus
chocolate agar contains _
hemin (X factor)
NAD
types of bacteria to consider with chocolate agar
respiratory
urogenital
coagulase is for identifying _
Staph auereus
what does coagulase do in slide test
converts fibrinogen in plasma -> fibrin
free coagulase produces _
clot
macconkey agar is _ medium
selective and differential
bile salts of macconkey agar has what function
selectively inhibits gram positive bacteria
macconkey test differentiates _
gram-negative bacilli on their ability to ferment lactose
oxidase test detects _
cytochrome c oxidase
cytochrome c oxidase function
catalyzes transport of electrons from NADH to electron acceptors
urease function
hydrolyzes urea
how does urease test work
relies on production of ammonia (basic pH)
The cumulative results of hospital performed bacterial susceptibility testing organized into a summary table
antibiogram
antibiogram serves as a reference guide to _
resistance patterns for an entire hospital setting
what is sent when a culture and sensitivity test is ordered?
a biological sample collected from the suspected site of infection
choose an antibiotic that > _ % of the bacteria is susceptible
85%
therapy in which antibiotics are used to reduce anticipated risk
prophylactic
empiric therapy
antibiotics are used to target a certain suspected infection while workup is in progress
almost all early antibiotic treatment is _ therapy
empiric
what info do we get back on a bacterial culture and sensitivity
identification of bacteria
susceptibility to bacteria
therapy where the diagnosis is known and a certain pathogen is targeted
definitive therapy
symptoms of staph A infections
pneumonia
infective endocarditis
sepsis
osteomyeletits
menstural toxic shock syndromes
soft tissue infections
staphylococcus aureus causes which infections
abscesses
skin + soft tissue
endocarditis
osteomyelitis
septic arthritis
impetigo
which bacteria is associated with infection from implanted devices
Staphylococcus epidermidis
bacteria associated with dental caries
strep viridans
bacteria associated with exotoxin-mediated diseases
staphylococcus aureus
diseases associated with strep pneumo
pneumoniae, meningitis, otitis, sinusitis
strep pyogenes is associated with what diseases
GAS
pharyngitis
cellulitis
impetigo
TSS
staph A vs staph epidermidis differentiating factor
staph A is coagulase positive
neonatal meningitis is caused by _
strep agalactiae
group B strep
strep agalactiae
who is susceptible to streptococcus pneumoniae
young children
elderly
those with chronic diseases
chronic diseases that make individuals vulnerable to pneumonia
DM
COPD
HIV
splenectomy
malnourished
alcoholism
community acquired pneumonia
pneumonia in a previously healthy person who acquired the infection OUTSIDE of the hospital
causes of acute bacterial meningitis
strep pneumoniae
N. meningitidis
bacterial from dental procedures can cause _
endocarditis
brain abscess
main habitat of strep agalactiae
vagina
E. faecalis hemolysis group
gamma
E. faecalis associated diseases
UTI
biliary tract infection
E faecalis habitat
human colon
spore forming gram positive bacilli
Clostridia
NON-spore forming gram + bacteria
listeria monocytogenes
where is clostridium perfringens found
soil and human colon
cause of gas gangrene
Clostridium perfringens
Clostridium perfringens causes _
gas gangrene
food posioning
C. diff toxin A
inflammatory colitis
C. diff toxin B
cytotoxin
frequent antibiotics associated with C. diff
ampicillin
augmentin
cephalosporins
clindamycin
occasional C. diff antibiotics
penicillins
quinolones
rare/never C. diff antibiotics
tetracyclines
metronidazole
listeria monocytogenes is mostly _ borne
food
how does listeria monocytogenes cause infection
enters cells via phagocytosis
releases listeriolysin toxin
listeria toxin
liesteriolysin
food associated with meningitis in pregnancy
soft cheeses
transplacental meninigitis cause
listeria monocytogenes
foods associated with listeria monocytogenes
dairy
poultry
ground meat
aerobic gram negative bacilli
H. influenzae
Legionella pneumophilia
pseudomonas aeruginosa
pasteurella multocida
virulence factor of H. influenzae
capsule
H. influenzae type B causes what diseases
meningitis
epiglottitis
septic arthritis
how does unencapsulated H. infleunza spread
contiguous spread along tissue planes
unencapsulated H. influenzae causes
otitis media
sinusitis
bronchitis
pneumonia
most common H. influenza strain
type B (encapsulated)
cause of atypical lobar pneumonia
legionella pneumophila
legionella pneumophila causes what diseases
legionnaire's
pontiac fever
pontiac fever
mild flu-like URTI
main successful opportunistic pathogen
pseudomonas aeruginosa
where can pseduomonas aeruginosa infections occur
skin
hospitals
UTI
respiratory tract
bacteria associated with cat bites
pasteurella multocida
_ develops after a cat bite
painful cellulitis
PMN cells are also known as
granulocytes
moraxella catarrhalis associated with which diseases
bronchitis
sinusitis
otitis media
N. gonorrhoeae can cause _
pharyngitis
cervicitis
gonorrhea
important sign of sepsis that accompanies meningitis
meningoccocal rash
intra and extra intestinal disease bacteria
E. coli
salmonella
proteus species
intra-intestinal bacteria
shigella
camplyobacter jejuni
H pylori
bacteriodes fragilis
extra-intestinal disease bacteria
Klebsiella pneumonia
E coli transmission
contaminated water/food
E. coli associated diseases
neonatal sepsis, meningitis
UTIs
diarrheal diseaes
neonatal sepsis causative bacteria (3)
S. agalactiae
E. coli
L. monocytogenes