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human pathogens: gram positive cocci
streptococcus pyogenes
staphylococcus aureus
human pathogens: clostridium
tetanus, botulism, c. perfringens, c. difficile
human pathogens: bacillus
anthrax, b. cereus
human pathogens: STIs
gardnerella, chlamydia, neisseria, syphilis, chancroid
human pathogens: respiratory pathogens
diphtheria, h. influenzae, pertussis, legionella, strep. pneumoniae, pseudomonas
human pathogens: gastrointestinal pathogens
klebsiella, listeria, salmonella, shigella, cholera, h. pylori, campylobacter, e. coli
human pathogens: animal-mediated
yersinia pestis, pasteurella, bartonella
human pathogens: mycobacteria
TB, leprosy, atypical mycobacteria, mycoplasma
human pathogens: tick-borne pathogens
Lyme, Rocky Mountain spotted fever, anaplasma
streptococcus pyogenes
type
mode of transmission
vaccine
group A streptococcus
gram positive cocci chains
B-hemolytic: cause complete lysis of RBCs
modes of transmission: normal flora of human oropharynx and skin
no vaccine
streptococcus pyogenes virulence factors
pili: made M protein adhere to pharyngeal epithelium - antibodies against M protein cross-react with cardiac myosin
capsule: resists phagocytosis
glycocalyx: adheres strongly to endothelium of heart valves
enzymes that degrade human tissues
toxins
streptococcus pyogenes: virulence factors - toxins
exotoxin B: rapidly destroys tissue
hemolysins: streptolysin O and streptolysin A casue B-hemolysis and death of phagocytes
anti-streptolysin O
causes B-hemolysis and death of pathogens
indicator of prior infection
what does streptococcus pyogenes cause?
strep throat
acute rheumatic fever
necrotizing fasciitis
*most common cause of cellulitis
also causes impetigo, erysipelas, scarlet fever, streptococcal toxin shock syndrome
strep throat symptoms
severe exudative pharyngitis - yellow or white exudates on tonsils
fever
painful cervical lymphadenopathy
rheumatic fever symptoms
couple weeks after pharyngitis is untreated - reactive migratory polyarthritis with ref/hot/swollen joints, myocarditis and endocarditis damaging mitral and aortic valves, rash, fever, chorea
antibodies made to M protein cross-react with joints, heart, and brain tissues (arthritis, carditis, chorea)
immune complexes can deposit into glomeruli causing glomerulonephritis
necrotizing fasciitis
necrotizing fasciitis leading to tissue death
staphylococcus aureus
type
mode of transmission
vaccine
gram+ cocci clsuters
catalase positive, coagulase positive, B-hemolytic
part of normal flora in nose and some skin
- fomite sources, breast milk, vaginal flora
no vaccine
staphylococcus aureus: virulence factors
capsule: evades immune system
peptidoglycan: has endotoxin-like properties to cause septic shock - techie acid also induces septic shock
catalase: degrades H2O2 in phagolysosomes of phagocytes to survive
coagulase: causes plasmas to clot (prothrombin -> thrombin)
hemolysins: hemolyses RBCs to get iron for growth
staphylococcus aureus: virulence factors - toxins
enterotoxins: superantigen - cause prominent vomiting and watery diarrhea - resistant to heat, stomach acid and enzymes
toxic shock syndrome toxin: septic shock; up to 25% of strains have this
exfoliatin: protease that causes separation of epidermis - causes scaled skin syndrome and bullous impetigo
staphylococcus aureus: virulence factors - antibiotic resistance
B-lactamase: degrades B-lactam antibiotics (like penicillin) - 90% of S. aureus have this; encoded by plasmids
penicillin-binding protein mutations: resistant to B-lectamase resistant antibitoics such as methicillin and nagcillin - MRSA (most common cause of skin abscesses, like IVDU; cause pneumonia, necrotizing fasciitis, and sepsis in immunocompetent patients; 50% of hospital isolated strains)
vancomycin resistance cassette: encoded in transposons on plasmas - VRSA
staphylococcus aureus - skin infections
pyogenic infections - skin or soft tissue
scaled skin syndrome
toxic shock syndrome
erythematous, hot, painful, swollen skin - cellulitis firm to touch, abscesses can be squishy and exude purulence
can spread to surrounding structures and blood stream causing sepsis
tx: I&D, antibiotics, mupirocin ointment to reduce nasal colonization or chlorhexidine showers for nasal colonization
scaled skin syndrome (fever, large bull, erythematous macular rash that desquamates) - electrolyte imbalances can occur due to fluid losses; happens in young children
staphylococcus aureus - food poisoning
gastroenteritis
ingestion of preformed enterotoxin - short incubation period (1-8hrs)
staphylococcus aureus - toxic shock syndrom
fever, hypotension, diffuse sun-burn like rash that desquamates, multi-organ system involvement
clostridium tetani
type
mode of transmission
vaccine
anaerobic gram positive bacilli
spore forming
sił source of spores entering wound which enter skin - spores germinate in necrotic tissue with poor blood supply
vaccine for tetanus - need booster every 10 years
antitoxin available
clostridium tetani: virulence factors
tetanus toxin: blocks release of inhibitory neurotransmitters glycine and GABA
leads to excitatory neurons that are unopposed
toxin travels from wound to axons or via blood stream to spinal cord
clostridium tetani: response
muscle spasm and spastic paralysis
lock jack & neck muscles
grimace, opisthotonos, hyperreflexia
respiratory failure
clostridium botulinum:
type
mode of transmission
vaccine
anaerobic gram positive bacilli that forms spores
ingestion of improperly sterilized canned food in non-acid environment
can also get IVDU if spores are on skin
antitoxin, but no vax
bacteria in cans
spores on vegetables
bacteria can't grow in acidic environment - risk is in non-acidic cans
spores are heat resistant up to 115C, but toxin is heat labile
spores germinate in canned anaerobic environment - can swells from the gas production
clostridium botulinum: infants
honey with spores can germinate inside infant because it is favorable environment
lack of gastric acid - less normal flora, immature immune systems
spores can now germinate and toxin forms to cause illness similar to adults - no honey before 1 year old
clostridium botulinum: virulence factors
botulinum toxin acts as neuromuscular junction to block release of acetylcholine
toxin encoded on plasmids, in bacterial genome, or by bacteriophages
toxin goes from mucosa in GI tract to bloodstream and peripheral nerves
botulinum toxin
one of the most toxic compounds known
super Low LD50
clostridium botulinum leads to
descending weakness and flaccid paralysis - diplopia, dysphasia, ptosis, eventual respiratory muscle failure
infant clostridium botulinum leads to
hypotonia, weakness, respiratory problems
can recover spontaneously
wound clostridium botulinum leads to
spores contaminate in a wound, germinate and produce toxin at site
clostridium perfringens
type
mode of transmission
vaccine
anaerobic gram positive bacilli that form spores
normal flora of colon and vagina (non-spore vegetative form) - can enter skin via wounds or be ingested in contaminated food with heat-resistant spores located in soil
no vax
clostridium perfingens: virulence factors
alpha toxin: damages cell membranes leading to hemolysis and necrosis
degradative enzymes produce hydrogen gas in tissues - crepitus felt
enterotoxin: causes diarrhea
clostridium perfingens: gas gangrene
necrotizing fasciitis or myonecrosis
war wounds, automobile/motorcycle accidents, septic abortions (endometritis)
high mortality rate
I&D & antibiotics
clostridium perfingens: food poisoning
grow rapidly in reheated meat dishes
watery diarrhea, cramping, little vomiting
resolves in 24 hours
clostridium difficile:
type
mode of transmission
vaccine
anaerobic gram + bacilli - form spores
part of normal flora (3%) that can overgrow after antibiotic (like clindamycin) - also can be fecal-oral route
no vax
can do fecal transplants to outcompete with normal flora
clostridium difficile: virulence factors
exotoxin A: watery dirrhea
exotoxin B: causes apoptosis of mucosal cells; leads to pseudomembrane formation (thick, adherent, white/yellow plaques on mucosal surface of colon)
hypervirulent strain of clostridium difficile
more severe disease, more recurrences, and more resistant to metronidazole and fluoroquinolones
what does clostridium difficile cause?
pseudomembranous colitis: non-bloody diarrhea, fever, abdominal pain
many neutrophils in stool
toxic megacolon can occur
bacillus anthracis
type
mode of transmission
vaccine
gram + bacilli in chains that form spores
spores located in soil or found in animals - enter through breaks in skin or inhalation; ingesting contaminated meat; spores germinate once inside body
vaccine available and mAb protective antigen
bacillus anthracis: virulence factors
capsule resists phagocytosis
anthrax toxin with 3 components
anthrax toxin (bacillus anthracis): 3 components
protective antigen: makes pore in cell membranes to allow lethal factor and edema factor inside cell - antibodies against this
lethal factor: exotoxin protease causing necrosis
edema factor: exotoxin causing edema
bacillus anthracis causes
anthrax -
cutaneous: painless, necrotic lesions with significant edema - can progress to bacteremia and death
pulmonary: after inhalation, moves to mediastinal lymph nodes and causes hemorrhagic mediastinitis (wool-sorter's disease) - not transmissible; can case septic shock and death
GI: vomiting, bloody diarrhea, abdominal pain
bacillus cereus
type
mode of transmission
vaccine
gram+ bacilli; form spores
spores on grains (like rice) survive high heat and germinate when reheated or kept warm for long - ingested and infects GI tract
no vax
bacillus cereus: virulence factors & disease
enterotoxin causes water diarrhea
gastroenteritis - short incubation (4hrs) nausea and vomiting; long incubation (18hrs): watery diarrhea
gardnerella vaginalis
type
mode of transmission
vaccine
facultative gram+ bacilli
*cell wall thinner than typical gram+ so loses color and can appear pink
part of normal flora - dysbiosis where it can replace lactobacillus (pH over 4.5)
no vax
what does gardnerella vaginalis cause?
bacterial vaginosis - white/gray fishy discharge
most common vaginal infection in sexually active women
no inflammation, but can be itchy or irritating
clue cells - epithelial cells covered with bacteria
higher incidence of pre-term deliveries
chlamydia trachomatis
type & info
obligate intracellular bacteria with cell walls that resemble gram negatives
extracellular, metabolically inert "sporelike" elementary body which reorganizes into larger metabolically active reticulate body which forms daughter cells by binary fission then turn back into elementary bodies that are released from the cell
inclusion body - site of replication inside cell - seen in giemsa stains
chlamydia trachomatis
mode of transmission
vaccine
direct sexual contact or through birth canal - enter GU tract, conjunctiva, respiratory tract
infects epithelial cells of mucous membranes or lungs
usually co-infection with N. gonorrhea
vaccine in clinical trials
chlamydia trachoma's: presentation
asymptomatic often
urethritis
cervicitis
lymphogranuloma venereum (genital lesions and lymphadenopathy)
pneumonia
conjunctivitis
reiter's syndrome
chlamydia urethritis
clear, mucoid urethral discharge in males --> epididymitis, prostatitis, or proctitis
chlamydia cervicitis
purulent vaginal discharge and intermenstrual bleeding in females --> PID with severe suprapubic pain from fallopian tube infection; sterility or ectopic pregnancy from tube scarring
chlamydia conjunctivitis
non-purulent discharge - can lead to blindness; can infect neonates while passing through birth canal
chlamydia reiter's syndrome
uveitis, urethritis, arthritis
from antibodies cross-reacting with antigens of cells in those areas
(can't see, can't pee, can't climb a tree)
neisseria gonorrhoeae
type
transmission
vaccine
gram - diplococci - pairs that look like kidney beans
direct contact (sexual or passage through birth canal) - infect GU or GI tract
no vax
neisseria gonorrhoeae virulence factors
pili - attach to urinary tract epithelium, resist phagocytosis
lipooligosacharide endotoxin
IgA protease - degrades IgA antibodies allowing bacteria to adhere to mucous membranes
penicillinase: degrades penicillin
neisseria gonorrhoeae presentation
urethritis/epididymitis
cervicitis
conjunctivitis (white purulent discharge; passed to neonate)
anorectal infection (blood or purulent discharge)
pharyngitis
disseminated infections in immunocompromised individuals (bacteremia) that manifest as arthritis, tenosynovitis or pustules in skin
neisseria gonorrhoeae: urethritis or epididymitis
purulent urethral discharge and dysuria in males
neisseria gonorrhoeae: cervicitis
purulent vaginal discharge and intermenstrual bleeding in females
PID which can lead to sterility or ectopic pregnancy from scarring in tubes
neisseria meningitides
type
transmission
vaccine
gram negative diplococci (pairs)
airborne droplets - can be asymptomatic carrier (5%); enters nasopharynx and spread to bloodstream - disseminates to meninges and joints
vaccine available
Neisseria meningitidis; virulent factors
polysaccharide capsule: resists phagocytosis
lipooligosaccharide endotoxin - cause fever and shock
IgA protease
factor H binding protein - inhibits complement
antibiotic resistance - PCN, sulfonamides, ciprofloxacin
neisseria meningitidis casues
epidemic meningitis and meningococcemia (high fever, hypotension and petechiae/purpura) can lead to DIC and adrenal insufficiency
treponema pallidum
type
transmission
vax
virulence factors
motile spirochetes; grow slowly
direct contact with skin or mucous membranes
cross placenta to infect fetus (vertical transmission)
rarely bloodborne
no vax
antibiotic resistance: azithromycin
treponema pallidum can cause
primary, secondary, tertiary syphilis
congenital syphilis
can be latent for years
treponema pallidum: primary syphilis
contender ulcers (chancres) then spread to bloodstream
treponema pallidum: secondary syphilis
maculopapular rash on plasma and soles (moist papules on skin and mucous membranes; condylomata late on genitals)
treponema pallidum: tertiary syphilis
granulomas (gummas) of skin and bones
neurosyphilis in CNS or PNS demyelination general paresis - paralysis and dementia
tabes dorsalis - loss of coordination
cardiovascular lesions - aortitis or ascending aortic aneurysm
treponema pallidum - congenital syphilis
via placenta
skin/bone lesions - hutchinson's teeth, mulberry molars, saber shins, saddle nose, rhagedes (fissures at angle of mouth/nose) and frontal bossing
can cause hepatosplenomegaly, interstitial keratitis, snuffles, deafness, stillbirth
haemophilus ducreyi
type
transmission
vax
virulence factors
gram negative bacillus; tropical countries
sexually transmitted
no vax
penicillinase: degrades PCN
what does haemophilus ducreyi cause?
chancroid - painful penile lesions, non-indurated ulcers, local lymphadenitis
Corynebacterium diphtheriae
type
transmission
vaccine
gram + bacilli
airborne droplets - infect upper respiratory tract; infect broken skin
toxoid vaccine
antitoxins
(balto, togo)
boosters every 10 years
Corynebacterium diphtheriae: virulence factors
diphtheria toxin carried by bacteriophage - cause cell death and pseudomembrane formation in pharynx and heart - thick, adherent, gray/yellow exudates on mucosal surface of throat
what does corynebacterium diphtheriae cause?
diphtheria - thick grayish pseudomembrane on tonsils and throat, fever, pharyngitis, cervical lymphadenopathy
pseudomembrane can extend to larynx and trachea - obstruct airway
myocarditis and endocarditis with arrhythmias and circulatory collapse
nerve palsies and paralysis of cranial nerves and peripheral neuritis of extremities
haemophilus influenzae
type
transmission
vax
gram - bacilli
airborne droplets - asymptomatic; infects upper and lower respiratory tract; spread via blood stream to meninges
vax available
haemophilus influenzae
virulence
polysaccharide capsule - resists phagocytosis
IgA protease
LPS endotoxin
haemophilus influenzae causes
URIs
meningitis
sepsis in young children - most common cause of epiglottitis
pneumonia in adults with COPD
bordetella pertussis
type
transmission
vax
gram - coccobacilli
airborne droplets infect upper respiratory tract
vax available
bordetella pertussis: virulence factors
capsule
pili
pertussis toxin (cause edema in mucosa leading to severe cough)
tracheal cytotoxin (part of peptidoglycan that damages ciliated cells in respiratory tract - LPS endotoxin works along with this to kill cells)
bordetella pertussis causes
whooping cough - acute tracheobronchitis - mild URI symptoms then severe paroxysmal cough (1-4 weeks "100 day cough")
productive cough followed by whoop
sometimes post-tussive emesis
whoop caused by swollen epiglottis - heard more in children
can progress to pneumonia and death
legionella pneumophila
type
transmission
vaccine
gram negative bacilli with flagella (motile) - replicate inside amebae (ensure survival)
inhalation of aerosolized contaminated environmental water sources - air conditioners, water-cooling towers & hot tubs
no vaccine
legionella pneumophila
virulence factors
LPS endotoxin
catalase (resist destruction in phagolysosomes
biofilm formation
beta-lactamase (degrades PCNs)
what does legionella pneumophila cause?
Legionnaire's disease: atypical pneumonia with confusion, diarrhea and acute kidney injury
can lead to sepsis and Pontiac fever
what kills legionella pneumophila?
hyperchlorination and high temperatures
streptococcus pneumoniae
type
transmission
vaccine
gram + diplococci or short chains
alpha-hemolytic: incomplete RBC lysis
normal flora of oropharynx that cause problems when entering respiratory tract
vaccine available - provider at least 5 years immunity
streptococcus pneumoniae: virulence factors
capsule: evade phagocytosis
lipoteichoic acid (LTA): causes septic shock
IgA protease
pneumolysin: causes alpha-hemolysis (partial lysis of RBCs)
penicillin-binding protein mutations: resistance
streptococcus pneumoniae - pneumonia
invades alveoli causing outpouring of fluid, RBCs, WBCs
fever, cough, red/rusty brown sputum, pleuritic pain
*most common cause of community acquired pneumonia
streptococcus pneumoniae causes
pneumonia, otitis media, sinusitis, mastoiditis, meningitis
*most common cause of bacteria in asplenic patients
pseudomonas aeruginosa:
type, characteristics
transmission
vaccine
gram negative bacilli
blue-green pigmented
fruity odor
opportunistic pathogen
mainly in soil and water, but can be part of intestinal flora (10%) - contamination of respiratory therapy and anesthesia equipment, IV fluids, distilled water, tap water
no vax
pseudomonas aeruginosa: virulence factors
glycol biofilm formation - especially in CF and burn patients
LPS endotoxin
Type 3 secretion system (injectosomes) - injects exotoxins directly into cell which avoids antibody response (exotoxin A - causes tissue necrosis like diphtheria toxin)
elastase and proteases - enzymes that facility invasion of organisms into blood stream
abx and disinfectant resistance
pseudomonas aeruginosa causes
disease in immunocompromised patients (opportunistic pathogen) - sepsis, pneumonia (CF), chronic wounds, UTIs, malignant, omits external (DM patients)
sepsis -> spreading of bacteria out to skin causing black necrotic lesions (ecthyma gangrenosum)
folliculitis - swimming pool/hot tub
corneal infection - contact lens
osteochondritis of foot - puncture wounds through shows
klebsiella pneumoniae
type
transmission
vax
facultative anaerobic gram - bacilli
nitrate reduces - nitrate
part of normal colon flora (also in soil and water; normal in some respiratory tracts)
no vax
klebsiella pneumoniae virulence factors
LPS endotoxin
capsule
extended-spectrum B-lactamases (ESBLs): resistant to almost all antibiotics
usually opportunistic causing UTIs and pneumonia - spread to bloodstream, meninges, and liver
pneumonia with thick, mucoid bloody sputum and currant jelly - can lead to abscesses and necrosis
listeria monocytogenes
type
transmission
vax
gram+ bacilli motile and live intracellularly
ingestion of contaminated food - unpasteurized milk, raw veg, undercooked or deli meat
worldwide in animals, plants and soil
goes from GI tract to vaginal - can be transmitted via placenta or during delivery
no vax
listeria monocytogenes virulence factors
beta hemolysis
cold enhancement (grows well in cold temp)
internalin: allows for invasion of deeper tissues
listeriolysin: evades phagosomes
actin rockets: propel bacteria form one cell into membrane of another cell
listeria monocytogenes causes
meningitis and sepsis in newborns, pregnant women and immunosuppressed
can lead to premature delivery and spontaneous abortion in infected in utero
meningitis develops 1-4 weeks post-partum in infected during delivery
also febrile gastroenteritis (vomiting, watery diarrhea, cramping)
salmonella typhi and enterica
type, characteristics
transmission
vaccine
flagellated, facultative anaerobic gram- bacilli
produces nitrites and hydrogen sulfide
fecal-oral route, ingestion of contaminated drinking water or food (poultry, eggs, dogs, reptiles are reservoirs for s. enterica)
humans only reservoir for s. typhi (some individuals are asymptomatic carriers - in gallbladder and excreted in feces) - Typhoid Mary
vaccine for s. typhi (50-80% protection)