Characterizing and Classifying Viruses, Viroids, and Prions

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116 Terms

1

Virus

Minuscule, acellular infectious agents with DNA or RNA.

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2

Infectious Agents

Pathogens causing diseases in various organisms.

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Virion

Extracellular state of a virus, includes capsid.

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Capsid

Protein coat surrounding viral nucleic acid.

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Nucleocapsid

Combination of nucleic acid and capsid.

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Phospholipid Envelope

Outer layer providing protection and host recognition.

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Intracellular State

Virus exists as nucleic acid after capsid removal.

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Genetic Material

Variety in viral genomes; DNA or RNA only.

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dsDNA

Double-stranded DNA, one type of viral genome.

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10

ssDNA

Single-stranded DNA, another type of viral genome.

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dsRNA

Double-stranded RNA, a viral genome type.

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12

ssRNA

Single-stranded RNA, a type of viral genome.

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13

Host Specificity

Viruses infect specific host cells via surface proteins.

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14

Bacteriophage

Virus that specifically infects bacteria.

<p>Virus that specifically infects bacteria.</p>
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Plant Viruses

Viruses infecting food crops through cell wall abrasions.

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Fungal Viruses

Understudied viruses, lack extracellular state.

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17

Capsomere

Protein subunits composing the capsid.

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Capsid Morphology

Shape and structure of viral capsids.

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19

Viral Envelope Composition

Phospholipid bilayer and proteins from host cell.

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Glycoproteins

Viral proteins aiding in host recognition.

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Generalist Viruses

Infect multiple cell types across various hosts.

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Viral Replication

Process of virus using host's metabolic pathways.

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Extracellular State

Virus outside host; can infect new cells.

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Intracellular State

Virus inside host; utilizes host machinery.

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Viral Genome Size

Much smaller than cellular genomes.

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Viral Infection Mechanism

Involves attachment, entry, replication, and release.

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27

Viral Diseases

Cause significant health issues in industrialized nations.

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28

Viral Classification

Based on genetic material and host specificity.

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Glycoproteins

Proteins on virus surface aiding in attachment.

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Helical capsid

Cylindrical structure enclosing viral genome.

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Matrix protein

Protein layer between capsid and envelope.

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Envelope

Lipid membrane surrounding some viruses.

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Enveloped virus

Virus with a lipid membrane coating.

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34

International Committee on Taxonomy of Viruses

Body that classifies viruses based on characteristics.

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35

Virus classification criteria

Based on nucleic acid, envelope, shape, size.

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36

Lytic replication

Viral replication leading to host cell death.

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37

Stages of lytic cycle

Attachment, Entry, Synthesis, Assembly, Release.

<p>Attachment, Entry, Synthesis, Assembly, Release.</p>
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Attachment stage

Virus binds to host cell receptors.

<p>Virus binds to host cell receptors.</p>
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Entry stage

Virus penetrates host cell membrane.

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Synthesis stage

Host cell machinery produces viral components.

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Assembly stage

New virions are formed from viral components.

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Release stage

New virions exit host cell, causing lysis.

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Lysogeny

Modified viral replication cycle without immediate lysis.

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Temperate phages

Phages that can enter lysogenic cycle.

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Prophages

Inactive phages integrated into host chromosome.

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Lysogenic conversion

Phenotypic change in bacteria due to prophages.

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Replication of animal viruses

Similar to bacteriophages with key differences.

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Animal virus attachment

Chemical attraction between viral proteins and receptors.

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Glycoprotein spikes

Molecules facilitating attachment of animal viruses.

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Entry mechanisms of animal viruses

Direct penetration, membrane fusion, endocytosis.

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Direct penetration

Virus injects genome directly into host cell.

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Membrane fusion

Virus envelope merges with host cell membrane.

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Endocytosis

Host cell engulfs virus, forming a vesicle.

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Uncoating

Process of removing viral capsid after entry.

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Synthesis of DNA viruses

Often occurs in the nucleus of host cells.

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Synthesis of RNA viruses

Typically occurs in the cytoplasm of host cells.

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mRNA synthesis

Process of creating messenger RNA from DNA.

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Nucleic acid replication template

Strand used to synthesize new nucleic acids.

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Viral Replication

Process by which viruses reproduce within host cells.

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Animal Viruses

Viruses that specifically infect animal cells.

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dsDNA Viruses

Double-stranded DNA viruses replicating like cellular DNA.

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Nucleus

Location where viral genome is replicated for dsDNA.

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Cytoplasm

Site where viral proteins are synthesized.

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Poxvirus

Exception; replicates in the cytoplasm, not nucleus.

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Hepatitis B Virus

Uses RNA intermediary to replicate DNA.

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ssDNA Viruses

Single-stranded DNA viruses not utilized by host cells.

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Parvoviruses

Type of virus with ssDNA genomes.

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Complementary DNA Strand

Formed by host enzymes to replicate ssDNA.

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dsRNA Virus

Double-stranded RNA virus involved in viral replication.

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Positive-sense ssRNA Virus

Acts as mRNA for protein synthesis.

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Negative-sense ssRNA Virus

Requires complementary RNA for translation.

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Retroviruses

Use DNA intermediary for genome production.

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Viral Reverse Transcriptase

Enzyme that transcribes RNA into DNA in retroviruses.

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Viral Assembly

Process where new virions are formed.

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Budding

Release method for enveloped viruses from host cells.

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Exocytosis

Release method for naked viruses.

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Latency

Dormant state of viruses in host cells.

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Latent Viruses

Viruses that remain inactive within host cells.

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Proviruses

Viruses integrated into host DNA permanently.

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80

Neoplasia

Uncontrolled cell division leading to tumor formation.

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Tumor

Mass of neoplastic cells in multicellular organisms.

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Benign Tumors

Non-cancerous growths that do not spread.

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Malignant Tumors

Cancerous growths that invade surrounding tissues.

<p>Cancerous growths that invade surrounding tissues.</p>
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Metastasis

Process of tumor cells spreading to other body parts.

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Oncogenes

Genes that promote cell division and can cause cancer.

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Environmental Carcinogens

Factors like UV light and radiation that activate oncogenes.

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Oncogenes

Genes that promote cancer development.

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Viruses in Cancer

Viruses cause 20-25% of human cancers.

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Tumor Repression

Mechanisms that prevent tumor formation.

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Burkitt's Lymphoma

A type of cancer linked to Epstein-Barr virus.

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Hodgkin's Disease

Cancer of the lymphatic system.

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Kaposi's Sarcoma

Cancer associated with HIV infection.

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Cervical Cancer

Cancer often caused by human papillomavirus (HPV).

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Culturing Viruses

Viruses require host cells for growth.

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Plaque Assay

Method to estimate phage numbers via plaques.

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Embryonated Eggs

Used for culturing viruses; inexpensive and large.

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Diploid Cell Cultures

Cell cultures with a limited lifespan.

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Continuous Cell Cultures

Cell cultures that can grow indefinitely.

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Viroids

Infectious RNA particles affecting plants.

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Prions

Infectious proteins causing neurodegenerative diseases.

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