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activation energy (Ea)
energy barrier that blocks the tendency for a chemical reaction to occur
catalysts
substances that speeds up reactions without themselves being permanently altered and allows equilibrium to be approached more quickly
e.g enzymes
enzymes
protein that catalyzes biological reactions.
substrate
molecule that reacts in the active site in an enzyme-catalyzed reaction.
transition state
high energy state after substrate binds to enzyme which lowers Ea - begins formation of products
active site
part of tertiary structure of enzymes where substrates bind - only specific substrates bind to certain enzymes
enzyme-substrate complex
when a substrate binds to active site = held together by hydrogen bonds, electrical attraction or temp covalent bonds = gives rise to product and free enzyme
enzymes and activation energy
enzymes lower the activation energy required for a reaction to occur, thereby increasing the rate of the reaction.
enzyme-substrate reactions
substrate orientation, physical strain, chemical charge - can use multiple
substrate orientation
is the positioning of substrates in a way that facilitates the formation of a product
physical strain
when substrate binds enzyme causes bonds in substrates to stretch by putting it into unstable transition state = causes strained bonds which are easier to break
chemical charge
enzyme either adds charges or change the polarity of the bonds within that substrate which changes that substrate's state
what influences enzyme’s specificity
substrate structure, active site shape, and interactions of chemical groups at active site
induced-fit
describes how enzymes undergo a conformational change upon substrate binding, to adjust to give an optimal fit
enzyme partners
some enzymes require presence of nonprotein chemical partners to work - prosthetic groups, inorganic cofactors, coenzymes
prosthetic groups
nonprotein molecules permanently attached to enzymes that assist in their function
inorganic cofactors
metal ions, copper and zinc which binds to certain enzymes - not always permanent
coenzymes
organic molecules that temporarily associate with enzymes and assist in catalysis, often derived from vitamins.
saturation
the point at which an enzyme is working at maximum efficiency, with all active sites occupied by substrates.