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traditional lab tests
direct microscopic examination (gram stain and morphology)
Cultures
Rapid tests
antibody/antigen/nucleic acid detection
Two largest classes of bacterial pathogens
gram positive cocci
Gram negative rods
Gram positive cocci
staphylococcus, streptococcus, enteroccoccus
Gram negative rods
e.coli, enterobacter, klebsiella
Importance of pure monocultures
definitive diagnosis relies on specific monoculture of a suspected pathogen from blood or wound
Decision tree analysis
1) gram staining
2) evaluate the growth of organisms in selective media
3) assessing chemical characteristics (fermentation properties)
4) testing for the presence or absence of specific enzymes
Gram positive cocci typically infect
skin, soft tissue, heart, lung, bones, joints, hardware, indwelling lines
Gram negative rods typically infect
Lung, any intraabdominal, organ
Anaerobes typically infect
lung, oral cavity, intraabdominal organ
Atypicals infect
the lung
antibiotics are classified based on
class and spectrum and microorganisms it kills
Narrow spectrum
effective against relatively few bacteria, less likely to cause gross disruptions, considered best choice when available
Extended-spectrum
drugs that have activity in additional species no covered by most members of a class
Broad spectrum
effective against many or most bacteria, most commonly used in empiric treatment
Process for choosing correct antibiotic
1) initial clinical assessment
2) empiric therapy
3) microbiological testing
4) definitive therapy
5) pharmacokinetics and pharmacodynamics
6)resistance considerations
7) ongoing monitoring
Prophylactic therapy
treatment given to prevent an infection that has not yet developed
Bacteriostatic
reduced growth but does not necessarily kill
Bactericidal
kills bacteria
Minimul inhibitory concentration
determine lowest concentration of antibiotic that inhibits growth, want concentration of antibiotic in tissue to be above mic
Clinical break points
MIC of an antibiotic that’s effective in treating an infectious disease from a particular strain in 80% of cases
Susceptible
MIC is less than breakpoint for organism
Intermediate
MIC is at breakpoint
Resistant
MIC is greater than breakpoint
MIC is not comparable
between drugs
Minimal bactericidal concentration
lowest concentration of the drug that kill 99.9% of total initially viable cells
Antibiotic dosing is based on
pharmacokinetic and pharmacodynamics
Pharmacokinetic
ADME
adsorption, distribution, metabolism, excretion
Pharmacodynamics
How antibiotics interact with organisms to kill them
Definitive therapy
Known organism susceptibility; agents that are safe, effective, narrow in spectrum, cost effective
Post-antibiotic effect
persistent suppression of microbial growth after levels of antibiotic have fallen below MIC