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what is organic chemistry?
Study of carbon compounds
why is carbon special?
-Carbon is a group 4a element
-four valence electron
-4 covalent bonds
-90% of 30+ million known chemical compounds contain carbon
Torben Bergman(1770)
distinguished organic from inorganic chemistry. Early scientist, believe organic compounds required a vital force.
Chevreul (1816)
demonstrated that organic substances could be prepared from nonliving materials.
Wöhler (1828)
converted ammonium cyanate to urea, helping disprove the vital force idea.
proton
Positively charged and located on the nucleus
neutron
Neutrally charged and located on the nucleus.
electron
negatively charged, and in the electron cloud around the nucleus.
atomic Number (Z)
Number of protons
mass number (A)
Proton+ Neutrons
isotopes
same element→ Same number of protons, but different number of neutrons.
atomic mass (amu)
Weighted average of naturally occurring isotopes.
if an atom has six protons and six neutrons then
Atomic Number=6
Mass number = 12
quantum mechanics
describes where electrons are likely to be found
S orbital
spherical
P orbital
dumbbell shaped
d orbital
More complicated/elongated dumbbell shaped
F orbital
Also exist, but is less important for introductory organic chemistry.
The first shell in an orbital
1s; maximum 2e-
2nd shell orbital
2s+three 2p; maximum 8e-
3rd orbital
3s+three 3p + five 3d;maximum 18e-
Aufbau Principle
electrons fill the lowest energy orbitals first.
1s→2s→2p→3s→3p→4s→3d
Pauli Exclusion Principle
maximum of two electrons per orbital and MUST HAVE opposite spins.
Hunds Rule
when equal – energy orbitals are available:
-One electron in each orbital first
why do atoms form bonds?
Atoms form bonds because the resulting compound is more stable than the separate atoms.
Ionic Bond
electrons are transferred,and common in salts.
covalent bond
Electrons are shared, especially IMPORTANT in organic chemistry.
Lewis structure
Represents valence electrons as dots
non-bonding electrons=
lone– Pair electrons
valence bond theory
Electrons pair and overlapping orbitals, and also the electrons are attracted to both nuclei.
Sigma Bond
forms through head on overlap.
Single bonds or sigma bonds
Circular/cylindrical cross-section
Bond energy
Measures the strength associated with breaking/forming a bond.
Bond Length
1.) Too close→ Nuclei repel
2.) Too far apart→ Bonding becomes weak
oxygen in water
sp³ orbital
molecular orbital theory
Describes where electrons are likely to be found in a molecule.
two types of molecular orbital
Antibonding MO, and Bonding MO.
bonding MO
Lower energy and more stable
anti-bonding MO
higher energy and less stable
drawing organic structures-line – angle structures three rules
1.) carbon atoms aren’t usually shown
2.) hydrogen attached to carbon aren’t shown
3.) Atoms other than C and H are shown
electronegavity
atoms ability to attract shared electrons in covalent bond.
f=4.0
most electronegative
Cs=0.7
least electronegative
how to see electronegatively.
generally increases toward the upper-right
inductive effect
shifting of electrons in a bond because of the electronegativity of nearby atoms.
similar electronegativity
Nonpolar covalent
electronegativity difference <2
Polar covalent
electronegative difference >2
Ionic
A molecule can have polar bonds, but still be
Non-polar overall
Dipole moment
μ = Q × r
symmetry can cause apples to cancel? True or false.
True
formal charges
Help keep track of valence electrons in molecules
resonance forms
differ only in the location of pi electrons or loan pairs. Connected by a double headed arrow
curved arrow
Movement of an electron pair
Arrow tail
Where electrons start
arrowhead
where electrons go
Bronstad acid
Donates H +
bronsted base
accept H+
Ka
acidity Constant
Large Ka
strong acid
Small Ka
weak acid
Lower pKa
stronger acid
Higher pKa
weaker acid
The reaction tends to favor the side with the
Weaker acid
If you have:
Acid A + Base B ⇌ Base A + Acid B
compare the pKa Values of the acids
organic acids contain a
Positively polarized hydrogen
Two important types:
O-H acids
C-H acids
iorganic base has an atom containing a lone pair of electrons that can bond to H+. True or False?
True
Lewis acid
electron – pair accepter
Lewis base
Electron-pair Donor
organic chemistry happens in
3-D space
non-covalent interactions (Three major types)
1.) dipole-dipole forces
2.) dispersion forces
3.) Hydrogen bonds
dipole-dipole
Between polar molecules because of electrostatic interactions between dipoles.
dispersion forces
occur between all neighboring molecules.
hydrogen bond
H bonded to an electronegative atom.
functional group
A collection of atoms at a specific site in a molecule that gives the molecule characteristic behavior.
alkene
C=C double bond
alkyne
c///c triple bond
arene
special bonding represented by alternating single/double bonds, in a six membered ring.
alkanes
compounds containing:
•C-C bonds
•C-H bonds
•no functional group
alkanes are also called
aliphatic compounds
isomer
compounds or isomers when they have the same molecular formula but different arrangements of their atoms.
constitutional isomers
differ and how their atoms are connected/arranged in chains.
straight-chain/normal alkane
carbons are connected to no more than two other carbons
branched-chain alkane
at least one carbon is connected to three or four carbons
condensed structure
Shorten way to represent a molecule.
EXAMPLE
CH₃CH₂CH₂CH₃
=butane
alkyl group
formed by removing 1 H from an alkane.
alkyl group general abbreviation
R
the alkane ending in -ane changes to -yl
EXAMPLE
methane→ Methyl-CH3
types of alkyl groups
primary, secondary, and tertiary.
primary (1)
connecting carbon is attached to one other carbon
secondary (2)
connecting carbon is attached to two other carbons
tertiary (3)
Connecting carbon is attached to three other carbons.
Remember for classifying alkyl groups
based on the carbon attached to the rest of the molecule, NOT simply the number of carbons in the entire group.
naming alkanes
find the parent chain
Number the parent chain
Identify substituents
write the name
1 Carbon
methane
2 Carbon
Ethane
3 Carbon
propane
4 Carbon
Butane
5 Carbon
Pentane
6 Carbon
Hexane