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Epidemiology
Is the study of FACTORS that determine the frequency,
distribution, and determinants of diseases in human
populations, and ways to prevent, control, or eradicate diseases in populations.
Pathology
Is the study of the STRUCTURAL AND FUNCTIONAL MANIFESTATIONS OF DISEASE and involves diagnosing of diseases in individuals.
It is the study of the ESSENTIAL NATURE OF DISEASES and especially of the structural and functional changes produced by them
Infectious Disease
is a disease that is CAUSED BY A PATHOGENIC
MICROORGANISMS, such as bacteria, viruses, parasites or fungi.
Communicable Disease
An infectious disease that is TRANSMISSIBLE FROM ONE PERSON TO ANOTHER.
Contagious Disease
A communicable disease that is EASILY TRANSMITTED
FROM ONE PERSON TO ANOTHER
Zoonotic Disease/Zoonoses
Infectious disease that human ACQUIRES FROM ANIMAL souces
Sporadic Diseases
Disease that OCCURS ONLY OCCASIONALLY (sporadically) within the population of a particular geographic area.
In USA, sporadic diseases includes botulism, cholera, gas gangrene, plague, tetanus and typhoid fever.
In the Philippines, sporadic diseases includes Pellegra, Elephantiasis and Myelitis
Endemic Diseases
Disease that are ALWAYS PRESENT within the population of a particular geographic area.
The number of cases may fluctuate over time, but the disease never dies out completely.
Endemic diseases in USA includes TB, STDs such as gonorrhea and syphilis, common colds, influenza, chickenpox and mumps.
In the Philippines, this includes Chronic Diarrhea, Typhoid and
Epidemic Diseases
Diseases that OCCUR IN A GREATER THAN USUAL NUMBER OF CASES IN A PARTICULAR REGION, and usually occur within a relatively short period of time.
is the incidence of a communicable disease among a number of people to an extent that is recognized statistically as being well beyond the normal expectancy for the disease in a community in a different period of time.
In the Philippines, this includes Dengue Fever, German Measles, and Cholera. Recently Measles (2019) and Leptospirosis (2018) were also considered as an epidemic disease in some areas in the Philippines
Pandemic Diseases
Disease that is OCCURRING IN EPIDEMIC PROPORTIONS IN MANY COUNTRIES SIMULTANEOUSLY– sometimes worldwide
Affects large number of people at the same time and TRANSCENDS COMMUNITY BOUNDARIES
Agent/Infectious Agent
Microorganisms capable of producing infectious disease under circumstances of host and environment favoring transmission
Infectious pathogens vary in size and biological makeup from protein particles (prions) and ultramicroscopic viruses to multicellular tapeworms many meters long.
Host
A person or other living organisms that can be infected by
an infectious agent under natural conditions
Environment
Refers to the ecological conditions that favor the
interaction of host and agent

Chain of Infection
AGENT/PATHOGENS
Disease – causing Microorganisms
Viruses and Prions
Acellular (Infectious Particles)
Bacteria, Archaea, Algae, Protozoa, Fungi
Cellular (Microorganism)
INDIGENOUS MICROFLORA
Microbes that lives
on and in the human
body
OPPORTUNISTIC PATHOGEN
Do not cause disease
under ordinary conditions,
but have potential to cause
disease should the
opportunity present itself
DECOMPOSER OR SAPROPHYTES
Involved in the
decomposition of
dead organisms and
the waste products
of living organisms
Microbiology
The study of microbes
Bacteriology
The study of structure, functions
and activities of Bacteria
Phycology
The study of Algae
Protozoology
The study of Protozoa and their activities
Mycology
The study of Fungi
Virology
The study of Viruses and their effects on living cells of all type
Archaea or Cyanobacteria
First microbes on Earth
Bacteria and Protozoa
The First microbes to be observed by humans
Anton van Leeuwenhoek
Father or Microbiology; Father of Bacteriology; Father of Protozoology; First to see live bacteria and protozoa
VIRUSES
Acellular microbes that are smaller than bacteria; Obligate intracellular parasites; Referred to as Infectious particles rather than microbes
They are not composed of cells.
Viruses
Many human diseases are caused by
VIRIONS
Complete virus particles that are very small and simple in structures
BACTERIOPHAGES
Viruses that infects bacteria. They are obligate intracellular pathogens, in that they must enter a bacterial cell to replicate.
Icosahedron
Bacteriophages: Almost spherical in shape, w/ 20
triangular facets; the smallest are about 25nm
Filamentous
Bacteriophages: Long Tube formed by capsid proteins
assembled into a helical structure; they can be up to about 900nm long
Complex
Bacteriophages: Icosahedral heads attached to helical tails; may also possess base plates and tail fibers
VIRULENT BACTERIOPHAGES
Always cause lytic cycle which ends with the destruction (lysis) of the bacteria cell

STEPS IN THE MULTIPLICATION OF BACTERIOPHAGES
ANIMAL VIRUS
Viruses that collectively infect humans and animals
ONCOGENIC VIRUS
Viruses that cause cancer
MIMI VIRUS
An extremely large double – stranded DNA virus that has been recovered from amoeba. It mimics the bacteria
Viroids
are infectious RNA molecules that cause variety of plant diseases.
Prions
are infectious molecules that cause variety of animal and human disease
BACTERIA
These are prokaryotic microscopic single celled organisms.
binary fission
Bacteria reproduce by
cocci (coccus)
ROUND OR SPHERICAL in shape.
diplococci
pairs of cocci
streptococci
chains of cocci
staphylococci
clusters of cocci
bacilli (bacillus)
RECTANGULAR OR ROD shaped. May be short or long, thick or thin, and pointed or w/ curved or blunt ends
diplobacilli
pairs of bacilli
streptobacilli
chains of bacilli
coccobacilli
short and resembling elongated cocci (Ex. Listeria
monocytogenes and Haemophilus influenzae)
spirilla
CURVED and SPIRAL in shape
Pleomorphic
Bacteria that exist in a variety of shapes
Pleomorphism
The ability to exist in a variety of shapes.
Mycoplasma
bacteria that do not have cell wall and are resistant to
antibiotics that inhibit cell wall synthesis
Blue to Purple
Color at the end of the Gram staining procedure Gram positive
Pink to Red
Color at the end of the Gram staining procedure Gram negative
Thick Layers
Peptidoglycan in cell walls Gram positive
Thin Layer
Peptidoglycan in cell walls Gram negative
Obligate Aerobes
Require oxygen to grow and multiply
Obligate Anaerobes
An anaerobes that can only grow in an anaerobic environment
Microaerophiles
Require reduced oxygen concentration
Aerotolerant Anaerobes
Does not require oxygen, grows better in the absence of oxygen but can survive in atmospheres containing molecular oxygen
Facultative Anaerobes
Capable of surviving in either the
presence or absence of oxygen
Acidophiles
Extremely acidic
Alkaliphiles
Extremely alkaline
Thermophiles
Extremely hot
Extremely cold
Psychrophiles
Halophiles
Extremely salty
Piezophiles
Extremely high pressure
PROTOZOA
Single– celled free living microorganisms
TROPHOZOITE
The motile, feeding, dividing stage in a protozoan’s life cycle
CYST
The nonmotile, dormant, survival stage
Cilia
CILIATES
Pseuudopodia (false feet)
AMEBAE (AMEBAS)
SPOROZOA
Generally nonmotile except for certain sex cells
PARASITES
Organism that lived on or in other living organisms, at whose expense they gain some advantage
ECTOPARASITES
Parasites that live outside the host’s body
ENDOPARASITES
Parasites that live inside the host’s body
FACULTATIVE PARASITES
Can be parasitic but are also capable of free living existence
OBLIGATE PARASITES
To survive, they must be parasites (needs a host)
PARASITOLOGY
The study of parasites. It can be divided into the study of parasitic
protozoa, helminths and arthropods
HELMINTHS
Means parasitic worms.
endoparasites
helminths that infect humans are always
ROUNDWORMS
Nematodes
TAPEWORMS
Cestodes
FLUKES
Trematodes
FUNGI
Eukaryotic, non photosynthetic microorganism. That can be either saprophytic or parasitic. It includes yeast, moulds and mushrooms.
Hyphae
Fungi that grows as filaments
Mycelium
A mass of intertwined fungi
YEASTS
Microscopic, single – celled organisms that usually reproduce by budding
Examples are Candida albicans, Candida neoformans
MOULDS
Microscopic, multicellular organisms
FLESHY FUNGI
Mushrooms, toadstool and bracket of fungi, collectively.
These are fungi that are not microorganisms
LIVING RESERVOIRS
Includes humans, household pets, farm animals, wild animals, certain insects and certain arachnids (ticks and mites)
HUMAN AS RESERVOIR/HUMAN CARRIER
The most important reservoirs of human infectious diseases
CARRIER
A person who is colonized with a particular pathogen, but the pathogen is not currently causing disease in that person
CARRIER
A person without apparent disease who harbors a specific infectious agent and is capable of transmitting the agent to other
PASSIVE CARRIER
Carry the pathogen without ever having had the disease