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vaccine
biological product that induces an immune response that confers protection against infection/ disease when you are subsequently exposed to pathogen
contains antigens (proteins, polysaccharides) from the pathogen
correlates of protection
Mechanistic CoPs (causal):
Directly responsible for protection
ex: anti-toxin abs for tetanus vaccine
Non-mechanistic CoPs (surrogate):
Correlate statistically with protection but aren't the actual cause
ex: anti-S IgG levels for HBV
live vaccines
attenuated - infect and reproduce but don’t cause disease
recombinant - infect cells but do not cause disease
infected cells express target immunogenic proteins
stimulates production of antibody and cell-mediated immunity
non-live vaccines
do not cause infection
chemically inactivated WT virions
formalin-inactivated
purified proteins
stimulate production of antibodies against viral proteins or purified protein
list of live vaccines
vaccinia
measles vax
polio vax
ebola vax
smallpox
variola
systemic febrile illness with rash
4 forms of smallpox
ordinary
vax-modified
flat
hemorrhagic - 25% case fatality
10-14 day incubation → easy spread
highly contagious
variola
poxvirus
large DNA genome >180 kb
enveloped
brick-shaped
replicates in cytoplasm unlike other DNA viruses
transmission: airborne, droplet, contact, fomites
variolation
Scab from smallpox patient delivered to healthy person by scratching it into the arm
vaccinia
milkmaids who had cowpox (vaccinia) were protected from smallpox
Edward Jenner inoculates boy with cowpox, gives smallpox → protected against smallpox
cowpox = attenuated ver of smallpox
live vax
Horse Grease disease
Horsepox virus HPXV
indistinguishable from vaccinia/ cowpox infections
nodules similar to parapoxVs/ bovine herpesV 2 (mamillitis)
Beaugency lymph
lymph from cows from Beaugency, France
for smallpox vaccines, originally propagated in animals
HPXV vs Vaccinia
HPXV
Plaque assay: smaller plaques than cowpox & Vaccinia, no secondary plaques
thus less virulent than cowpox & vaccinia
no clear advantage over using either HPXV or VACV as vaccine in balb/c mice
VACV-HPXV recombinants
possible evolution - poxV can swap DNA w/ ea o
Maybe a version of the vax was a hybrid of cow and horsepox
14L locus in Dryvax clone DPP17
smallpox VACV vaccine
encodes block of seq & frameshift mutation that resembles homologous locus in HPXV
recombination?
measles
airborne
only reservoir is humans
R0 = 14-18
deafness/ brain damage
1-5% case fatality
1/10 000 cases SSPE
SSPE
= subacute sclerosing pan-encephalitis
brain inflammation
fatal
occurs 5-10 yrs after recovery
measles vax
Edmonston strain
later vers passaged 40X in chicken embryos to attenuate
2 doses = 99% efficacy
herd immunity = 85-95%
polio
picornavirus
7-35 day incubation period
10% severe disease
neck stiffness, paralysis
fecal-oral transmission
Salk polio vaccine (IPV)
inactivated (killed, non-live) polio vaccine
WT type 1 & 3 polio inactivated with formalin (crosslinks proteins)
can still present ag to immune system
injected → ab production
humoural protection
cannot go to CNS
Sabin polio vaccine (OPV)
oral polio vaccine
live, attenuated
WT type 3 virus from fatal paralytic case
passaged:
21X in monkeys
47X in monkey cell culture
OPV attenuation
key mutation in 5’UTR affecting IRES (internal ribosomal entry site) → poor replication
can still stimulate ab production and cell-mediated imm response
OPV protection
infects cells within intestine → progeny virus excreted in stool
if progeny go to CNS, poor replication (no symptoms)
a WT infection later on neutralized by mucosal antibodies that are already there due to OPV
Vaccine-derived polio type 2
caused by OPV
the 5’UTR key mutation can sometimes revert
this is why Canada uses IPV
3rd world countries still use OPV - may be exposed during travel
Ebola vaccine
VSV (infects cattle)
removed glycoprotein, replaced with ebolaV glycoprotein
present to imm sys
efficacy = 95-100%
Ring vaccination strategy
Vaccinate all the people who have had contact with case 1
live vax challenges
requires cold chain
needle-based administration
logistically challenging, risk of needle reuse, hard for kids
herd immunity for immunocompromised/ pregnant
hard to develop