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isolation streaking
separation of colonies into pure cultures
spread plate
tenfold dilutions of the original culture are spread on agar plates
each colony is a viable organism
synthetic medium
medium that only contains known components
minimal medium
synthetic medium where the components are limited to essential nutrients for growth
complex medium
nutrient rich but less defined medium
enriched medium
complex medium and extra nutrients
can be used to grow fastidious organisms
blood, meat, soybean, milk, peptone
examples of complex media
selective media
inhibitor present to only encourage growth of specific organism
differential media
multiple types grow but look visually different
selective (gram negative) and differential (lactose)
fermenting = red, nonfermenting = white
what type of media is MacConkey?
salmonella and shigella
which gram negative bacteria species do NOT ferment lactose?
enriched differential and not selective
what type of media is blood agar?
staphylococcus aureus
what type of organism exhibits beta hemolysis?
binary fission
how does bacteria grow and divide?
false
true or false: bacterial reproduction is always symmetrical
doubling time
in an environment with few bacteria but plenty of resources, bacteria will divide at a constant interval called
No times 2 power n
No is number of organisms at time 0, n is generations
equation for bacterial growth
grow and die
bacteria blank and blank exponentially
batch culture
culture bacteria in flasks or test tubes containing liquid medium
true
true or false: bacteria grow slower in batch culture because there is a limited amount of nutrients and accumulation of waste
lag phase
bacteria are preparing their cell machinery for growth
log phase
when bacteria is most actively growing
stationary phase
cells stop growing and shut down their growth machinery while turning on stress responses to retain viability
death phase
cells begin to die at an exponential rate
log phase
which phase of bacterial growth are bacteria most susceptible to antibiotics that target cell wall synthesis, protein synthesis, or DNA replication?
chemostat
ensures exponential growth by constantly adding and removing equal amounts of culture medium
growth factor
an essential organic compound that a specific microorganism must have to survive and grow but cannot synthesize
rickettsia
example of fastidious organism?
auxotroph
mutant organisms that have lost the ability to synthesize a particular growth factor required for their growth
fastidious organism
organisms that have complex nutritional requirements and require enriched media (need specific growth factor)
not mutant
autotroph
organisms that make their own carbon compounds starting with CO2
heterotroph
organisms that obtain carbon compounds from other organisms
phototroph
organisms that use light as an energy source
chemotroph
organisms that use chemical compounds as an energy source
lithotroph
chemotrophs that use inorganic compounds as energy
organotroph
chemotrophs that use organic chemical compounds
extremophile
bacteria, archaea, and some eukaryotic microbes that can grow in extreme environments
thermophile
organism that has membranes and proteins adapted to high temperatures
protein folding is very tight
membrane has ether bond (less reactive)
Thermus aquaticus
what hyperthermophile has TAQ polymerase?
psychrophile
organism that can survive in low temps
has proteins that are more flexible
mesophile
organism that grows in typical conditions (20-40 C)
barophile
organisms that have adapted to grow at oppressively high pressures
typically also psychrophiles
halophile
species of archaea that require high concentrations of salt to survive
neutrophile
bacteria that grow between pH 5-8
alkaliphile
organism that grow best at pH 9-11
neutrophile
what type of organism is Helicobacter pylori?
highly motile and breaks down urea into basic ammonia
how does Helicobacter pylori survive in the acidic environment of the stomach?
strict aerobe
only survives in environment with oxygen
can detoxify reactive oxygen species
strict anaerobe
only survives in environment without oxygen
cannot detoxify reactive oxygen species
microaerophile
aerobic
survives in environments with lower oxygen concentration but still req oxygen
aerotolerant anaerobe
prefer anaerobic conditions but can survive oxygen environment
facultative anaerobe
both aerobic and anaerobic
better to have oxygen tho due to efficiency
top
where does obligate aerobe grow in tube?
bottom
where does obligate anaerobe grow in tube?
spread but more on top
where does facultative aerobe grow in tube?
between high and low oxygen
where does microaerophile grow in tube?
evenly distributed
where does aerotolerant grow in tube?
pseudomonas fluorescens
aerobic organism
clostridium spp endospore
anaerobic organism
e coli
facultative organism
helicobacter pylori
microaerophilic organism
superoxide radical, hydrogen peroxide, hydroxyl radical
types of reactive oxygen species?
hydroxyl radical
what is the most dangerous ROS?
SOD
what enzyme detoxifies superoxide radical?
catalase and peroxidase
what enzymes detoxifies hydrogen peroxide?
anaerobe jar
container where O2 is removed and CO2 is generated
anaerobe chamber
container with glove ports that remove the atmosphere via vacuum and replace it with a precise mixture of N2 and CO2 gases
facultative anaerobe, strict anaerobe, aerotolerant
what types of organisms can grow in the anaerobic jar?
biofilm
mass of bacteria that stick to and multiply on a solid surface
typically multiple types of bacteria
quorum sensing
only for prokaryotes
coordinate group behavior (gene expression)
bacteria release autoinducers, as autoinducer concentration increases, the signal binds to receptors turning on specific genes and coordinated group activity occurs
explain process of quorum sensing
spore coat has dipicolinic acid and calcium which makes it very dry, reducing reactivity to the environment
how do endospores stay so resilient?