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What is microbiology
The study of organisms that are usually too small to be seen by the unaided eye
What kind of techniques does microbiology use
Sterilization; culture media; isolate and grow organisms
What are the two fundamental types of cells
Prokaryotes and eukaryotes
What is food microbiology
Study of microorganisms which have both beneficial and deleterious effects on quality and safety of raw and processed food
What is a prokaryote
Single-celled organism; genetic material not enclosed by a nuclear membrane
What is present in bacteria in a prokaryote
Peptidoglycan present in cell wall
What are the classifications of microorganisms
Bacteria; archaea; fungi; protozoa; algae; viruses
What is the classification of bacteria
Prokaryotic cell; most have peptidoglycan cell wall and divide by binary fission
What is the classification of archaea
Prokaryotic cell; lack peptidoglycan; includes extreme halophiles and thermophiles
What is the classification of fungi
Eukaryotic cell; unicellular or multicellular
What is the classification of protozoa
Unicellular eukaryote
What is the classification of algae
Unicellular or multicellular eukaryote
What is the classification of a virus
Noncellular entity that is a parasite of cells; consists of nucleic acid core (DNA or RNA) surrounded by protein coat; related to foodborne outbreaks
What is an example of a bacterium
E. coli; Salmonella; S. aureus
What is an example of a fungus
Yeasts and molds such as Aspergillus
What is an example of a protozoan
Cyclospora; Entamoeba
What is an example of a virus
Norovirus (foodborne outbreak)
What is the structure of a prokaryote
Plasma membrane; nucleoid; periplasmic space; cell wall; capsule and slime layers; fimbriae and pili; flagella; endospore
What is the plasma membrane function of a prokaryote
Selectively permeable barrier; nutrient and waste transport; location of metabolic processes; chemotaxis
What is the function of the nucleoid in a prokaryote
Localization of genetic material (DNA)
What is the function of the periplasmic space in prokaryotes
Contains hydrolytic enzymes and binding proteins for nutrient processing and uptake
What is the function of the cell wall in a prokaryotic cell
Provides shape and protection from lysis in diluted solutions
What is the function of the capsule and slime layers in a prokaryotic cell
Resistance to phagocytosis; adherence to surfaces
What is the function of fimbriae and pili in a prokaryote
Attachment to surfaces; mating
What is the function of flagella in a prokaryote
Motility
What is the function of an endospore in a prokaryote
Survival under harsh conditions and environments
In crystal violet Gram stain what is positive and negative
Both Gram + and Gram − appear deep violet
In Gram stain with iodine what is positive and negative
Both remain violet
In Gram stain with alcohol wash what is positive and negative
Gram + remains violet; Gram − becomes colorless
In Gram stain with safranin what is positive and negative
Gram + remains violet; Gram − stains pink or red
Do Gram positive (+) cells appear thick or thin
Thick
Do Gram negative (-) cells appear thick or thin
Thin
What are conditions for bacterial growth
Moisture; temperature; oxygen; pH; nutrients; time
What are the phases of the bacterial population growth curve
Lag phase; exponential phase; stationary phase; decline or death phase
What is the lag phase
Period after inoculation before growth begins; few or no cells
What is the exponential phase
Cells divide rapidly by binary fission; population of live cells increases
What is the stationary phase
When growth ceases but cells remain active; live and few dead cells present
What is the decline or death phase
When nutrients are depleted or toxic waste builds up; more dead cells than live ones
What is taxonomy
Domain or kingdom – Bacteria;
division or phylum – Proteobacteria (Eubacteria);
class – Gamma Proteobacteria;
order – Enterobacteriales;
family – Enterobacteriaceae;
genus – Escherichia;
species – E. coli
What is a virus surrounded by
Protein coat and sometimes an outer membrane
What is the complete virus particle called
Virion
What are the three classes of viruses
Animal; plant; bacterial
What are bacteriophages
Viruses that infect bacteria; use host metabolism to produce new virus particles which are released to infect new cells
What is an endospore
Resistant dormant survival form produced inside a prokaryotic cell; not used for reproduction
What are endospores resistant to
UV and gamma radiation; desiccation; heat; starvation; chemical disinfectants
Can endospores germinate years after formation
Yes they can survive long periods and germinate later
What is the process of endospore formation called
Sporulation
In what phase do endospores start forming
Stationary phase when conditions deteriorate; metabolic activity changes
What is a normal cell called
Vegetative cell
What does stress trigger in Gram + bacteria
Sporulation
How long can spores survive in boiling water
About one hour
What is the endospore cycle
Dormancy; activation; germination; outgrowth; vegetative cell; sporulation
Is meat stew considered a high-risk food in terms of endospore germination
Yes
How can endospores and spores be eliminated
Heat; high-dose irradiation or UV; strong antimicrobial solutions such as chlorine or acids
What is heat sterilization in regard to endospores
moist heat using water
What is DNA
Genetic material with complementary base pairing A–T and C–G (RNA uses A–U and C–G)
What is a pathogen
A microorganism such as a virus; bacterium; parasite; or fungus capable of causing disease in a host
What are virulence factors
Molecular traits of pathogens that enhance their ability to cause disease in a host
What is whole-genome sequencing
Process of determining the complete DNA sequence of an organism’s genome
What is aseptic technique
A procedure for handling cultures to eliminate contamination by unwanted microorganisms
What does aseptic technique involve
Disinfecting work area and hands; using sterile supplies; minimizing exposure to air; using flame or biosafety cabinet
What are two goals of aseptic technique in the lab
Prevent contamination of the environment or self; prevent contamination of lab samples
What is sample collection at a food processing facility
Collect randomized lots; package properly; maintain correct temperature (some samples refrigerated); deliver to lab within 24 h
What is sample reception in the lab
Record date and client; number of samples; measure temperature (≤ 5 °C) with laser thermometer; check container integrity before processing
What are different types of culture media
Physical state; chemical composition; functional type
What is physical-state media
Liquid; semisolid; solid (convertible or non-convertible)
What is chemically defined (synthetic) versus non-synthetic media
Known composition vs. complex undefined composition
What are the functional types of media
Enriched; general-purpose; selective; differential; enumeration; assay; specimen-transport
What are examples of general-purpose and selective media
Nutrient agar = general purpose; nutrient broth = general purpose; MacConkey agar = selective enumeration; agar plate count = enumeration
When processing a sample what are the two key steps
Enumeration and detection
What is enumeration
Serial dilution (buffer peptone water; peptone water; citrate buffer; saline); plating; incubation; counting; reporting
What is detection
Enrichment for pathogen growth, allows rapid cell multiplication for storage or testing
What is aerobic plate count (APC)
Method providing a general estimate of viable aerobic bacteria; excludes obligate anaerobes and microaerophiles
What assumptions does APC make
Each colony arises from a single bacterium; bacterial clumping may cause colonies to arise from multiple cells
How are APC results reported
Colony-forming units per gram or milliliter (CFU/g or CFU/mL)
What do APC results indicate
Sanitation of product; predicted shelf-life; overall safety; sanitation efficiency
What are types of samples analyzed in microbiology
Liquid; solid; sponge or swab
How much sample is used for microbiological analysis
1:10 dilution (1 g/mL sample in 9 mL diluent)
What are the steps of the pour-plate method
Inoculate empty plate; add melted nutrient agar; swirl; allow colonies to grow within and on the medium
What are the steps of the spread-plate method
Inoculate solid medium; spread inoculum evenly; colonies grow only on surface
What is the equation for dilution
(Weight of sample × dilution factor) − weight of sample = volume of diluent needed
What is the goal of serial dilution
Reduce microbial concentration to achieve countable colonies (25–250 per plate)
If more than 300 colonies are observed how is it reported
Too numerous to count (TNTC)
What is an indicator microorganism
Organism reflecting microbial quality; used to detect process failure or post-process contamination
What is an indicator organism
Selected surrogate marker species such as coliforms; E. coli; Listeria
What do indicators of quality measure
Microbes or metabolic products used to assess existing quality or predict shelf-life
How is shelf-life determined
By initial microbial load and quality indicators
What are types of microbiological indicators
Total plate count (TPC) or plate count to quantify bacterial populations
What does microbial quality indicate
High TPC suggests poor quality and impending spoilage
Why are coliforms microbiological indicators
Aerobic or facultative anaerobic; Gram-negative; non-spore-forming; rod-shaped bacteria that ferment lactose with acid and gas within 48 h at 37 °C
What does the presence of coliforms indicate
High possibility of fecal contamination or lack of sanitation; increased likelihood of pathogen presence
Do positive coliforms confirm pathogen presence
No; they only indicate possible contamination
Is coliform normally present in raw food
Yes; type must be determined to assess safety
Is coliform present in heat-processed food
No; heat destroys them
What is fecal coliform or E. coli
Lactose-fermenting subgroup of coliforms found in fecal material; indicates poor sanitation and handling
What is Enterococcus
Gram-positive; facultative anaerobe; catalase-negative; from fecal material of animals; salt tolerant; resistant to freezing
What is microbiological criterion
Acceptability of a product or lot based on presence/absence or number of microorganisms and toxins per unit
What are the three types of microbiological criteria
Standards; guidelines; specifications
How can microbial criteria be used
To define and verify compliance with microbiological requirements
What is a lot
Quantity of product produced or stored under uniform conditions in a limited period