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Vocabulary flashcards covering key concepts from the lecture notes on Mechanisms of Infectious Disease (Chapters 10, pages 1–9).
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Basic objectives of organisms
All living organisms share goals of survival and reproduction and must extract essential nutrients from the environment for growth.
Normal microflora
Most organisms in the human body, especially the GI tract, with over 300 species that harmlessly inhabit exposed surfaces.
Infectious disease
A disease state resulting from interaction with another organism, harming the host when pathogens overcome defenses.
Host
Any organism capable of supporting the nutritional and physical growth requirements of another.
Colonization
Establishing a presence and multiplication of a living organism on or within the host; a necessary first step in infection.
Infection
Multiplication of an organism within a host that results in injury or pathologic damage.
Pathogen
Microorganisms so virulent that they are rarely found in the absence of disease; capable of causing disease.
Saprophyte
Free-living organisms obtaining growth from dead or decaying organic material; typically harmless but can cause opportunistic disease.
Opportunistic pathogens
Microorganisms (including saprophytes and normal flora) that can produce infectious disease when host defenses are weakened.
Virulence
The organism's inherent disease-inducing potential.
Fomite
Inanimate objects that carry an infectious agent.
Zoonoses
Infectious diseases transmitted from animal species to humans.
Nosocomial
Infections that develop in people while they are hospitalized.
Community Acquired
Infections acquired outside of health care facilities.
Commensalism
An interaction where the organism derives nutrition and shelter, but the host is not adversely affected.
Mutualism
An interaction in which both the microorganism and the host derive benefits (e.g., gut flora producing vitamin K).
Parasitism
A relationship whereby only the invasive organism benefits, while the host gains nothing or is harmed.
Prions
Protein particles that cause infectious disease and lack RNA or DNA; transmit by self-propagation.
Transmission
Mode of spread for prions: primarily by eating infected meat or receiving an infected transplant organ or cornea.
Virus
Smallest pathogens; obligate intracellular organisms with no organized cellular structure; genome is DNA or RNA ( never both ); replication requires a living cell.
Capsid
The protein coat surrounding the viral genome.
Genome type
The type of viral genome, DNA or RNA (single- or double-stranded).
Latency
Some viruses enter a latent, nonreplicating state for long periods without causing disease.
Retrovirus
Use reverse transcriptase to convert RNA genome into DNA, integrating into the host chromosome.
Oncogenic viruses
Viruses that transform normal host cells into malignant cells during replication.
Bacteria
Single-celled, prokaryotic organisms with a single circular double-stranded DNA chromosome.
Gram-positive
Bacteria with a cell wall rich in peptidoglycan; stain Gram-positive.
Gram-negative
Bacteria with an outer membrane containing lipopolysaccharide; stain Gram-negative and can induce shock.
Capsule
Extracellular layer that protects bacteria from environmental hazards and immune defenses.
Biofilm
Structured communities of bacteria that stick to and colonize surfaces.
Fungi
Free-living, eukaryotic saprophytes.
Ergosterol
Sterol in fungal cell membranes (not cholesterol); target of many antifungals; not found in bacterial cell walls.
Dermatophytes
Fungi that cause superficial infections of the skin, hair, and nails (dermatophytes).
Superficial mycoses
Infections limited to cooler cutaneous surfaces; organisms grow poorly at core body temperature.
Protozoa
Unicellular parasitic organisms causing diseases such as malaria, amebic dysentery, and giardiasis.
Helminths
Wormlike parasites (roundworms, tapeworms, and flukes). Transmission often via fertilized eggs.
Arthropods
Animal kingdom parasites and vectors (e.g., insects and arachnids) that impact infectious disease.
Epidemiology
Study of factors, agents, and circumstances that influence transmission of infectious disease among humans.
Incidence
The number of new cases of an infectious disease that occur within a defined population over a period of time.
Prevalence
The number of active cases at any given time in a population.
Endemic
A disease found in a particular geographic region with relatively stable incidence and prevalence.
Epidemic
An abrupt and unexpected increase in the incidence of disease over endemic rates.
Pandemic
The spread of disease beyond continental boundaries.
Portal of entry
The process by which a pathogen enters the body and gains access to susceptible tissues.
Penetration
Disruption in the integrity of the body's surface barriers (skin or mucous membranes) enabling entry.
Direct contact
Transmission from infected tissue or secretions to exposed, intact mucous membranes.
STIs
Sexually transmitted infections; a common mode of direct contact transmission.
Vertical transmission
From mother to child, crossing the placenta or during birth.
TORCH infections
Congenital infections: Toxoplasma, Others, Rubella, Cytomegalovirus, HSV.
Ingestion
Entry through the oral cavity and gastrointestinal tract; the agent must survive gastric acidity.
Inhalation
Entry through the respiratory tract, overcoming defenses like ciliated epithelium and phagocytes.
H. pylori urease
Enzyme that converts gastric urea to ammonia, helping neutralize stomach acid.
Exotoxins
Proteins released by bacteria that are highly specific and can cause cell death or dysfunction.
Endotoxins
Lipid-containing molecules in the outer membrane of Gram-negative bacteria that trigger inflammation and shock.
Adhesion factors
Molecules like pili or fimbriae that enable attachment to host tissues.
Intracellular survival
Bacteria surviving and replicating within phagocytic cells after ingestion.
IgA protease (N. gonorrhoeae)
Enzyme that cleaves secretory IgA, weakening mucosal immunity.
Invasive factors
Products (often enzymes) that facilitate penetration of barriers and tissues.
Phospholipases
Enzymes that destroy cellular membranes to aid invasion.
Collagenases
Enzymes that break down collagen in connective tissue to promote spread.
Hyaluronidase
Enzyme that destroys intercellular matrices to facilitate invasion.
Culture
Isolation and growth of an infectious agent outside the host for diagnosis.
Serology
Techniques that detect antibodies to identify infectious agents; IgM indicates acute infection; IgG indicates past exposure or later stages.
IgM
Antibody indicating acute or recent infection.
IgG
Antibody indicating prior exposure or later stages of infection.
PCR
Polymerase chain reaction; highly sensitive method that amplifies specific DNA segments to detect pathogens.
Immunization
Vaccination; the most efficient means of preventing infectious diseases.
IVIG
Intravenous immunoglobulin; pooled antibodies from healthy donors.
Cytokines
Substances that stimulate white cell replication, phagocytosis, and inflammation (e.g., interferons, interleukins).
Interferons
Cytokines that have antiviral and immunomodulatory effects.
Interleukins
Cytokines that regulate immune cell activity and communication.
Surgical intervention
Physical management (drainage, debridement, removal) when pathogens resist medical therapy.
Bioterrorism
Threat of deliberate use of microorganisms as weapons.
Category A
Highest-threat bioterrorism agents (e.g., anthrax, smallpox, botulism) based on risk and mortality.
Category B
Moderately presenting bioterrorism agents (e.g., Salmonella, cholera, E. coli) with moderate mortality.
Category C
Emerging pathogens with potential future risk (e.g., TB, Yellow Fever viruses).