BIOS3020_EJH_Lecture_3_and_4_Slide_Set

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41 Terms

1

DNA Replication

The process by which DNA makes a copy of itself during cell division.

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2

Base-pairing

The specific pairing of nitrogenous bases in DNA, where adenine pairs with thymine, and guanine pairs with cytosine.

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3

DNA polymerase

An enzyme that synthesizes new DNA strands by adding nucleotides to a pre-existing strand.

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4

Lagging strand synthesis

The discontinuous synthesis of DNA on the lagging strand, utilizing Okazaki fragments.

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5

Okazaki fragments

Short segments of DNA synthesized on the lagging strand during DNA replication.

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6

Helicase

An enzyme that unwinds and separates the DNA strands during replication.

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7

Topoisomerase

An enzyme that relieves the tension in supercoiled DNA ahead of the replication fork.

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8

RNase H

An enzyme that removes RNA primers during DNA replication.

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9

Telomerase

An enzyme that adds repetitive nucleotide sequences to the ends of chromosomes (telomeres) to protect them from deterioration.

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10

Semi-conservative replication

The process of DNA replication in which each new DNA molecule consists of one old and one new strand.

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11

Primase

An enzyme that synthesizes a short RNA primer to initiate DNA synthesis on the lagging strand.

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12

Leading strand

The DNA strand that is synthesized continuously in the 5' to 3' direction during replication.

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13

Replicosome

The complex of proteins and enzymes responsible for DNA replication at the replication fork.

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14

Clamp loader

Protein complex that helps load the sliding clamp onto DNA to stabilize DNA polymerase.

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15

Single-strand binding proteins (SSB)

Proteins that bind to and protect single-stranded DNA during replication.

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16

Polymerase I

DNA polymerase responsible for removing RNA primers and filling in gaps with DNA.

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17

DNA ligase

An enzyme that joins Okazaki fragments together by forming phosphodiester bonds.

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18

3’ to 5’ direction

The direction in which DNA polymerases read the template strand during synthesis.

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19

5’ to 3’ direction

The direction in which new DNA strands are synthesized.

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20

Replication fork

The Y-shaped region where the DNA double helix is unwound and separated for replication.

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21

RNA primer

Short strand of RNA that provides a starting point for DNA synthesis.

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22

Eukaryotic replication origin

The specific site on a eukaryotic chromosome where DNA replication initiates.

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23

Bacterial replication origin

The single site on bacterial DNA where replication begins.

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24

Gyrase

A type of topoisomerase that alleviates the torsional strain ahead of the replication fork.

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25

NTPs

Nucleoside triphosphates used by primase to synthesize RNA primers.

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26

dNTPs

Deoxynucleoside triphosphates used by DNA polymerase to synthesize DNA.

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27

Proofreading capacity

The ability of DNA polymerase to detect and correct errors in newly synthesized DNA.

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28

Telomere

The repetitive end of a linear chromosome that protects it from degradation.

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29

Dispersive replication model

A proposed mechanism of DNA replication where the new and old DNA are mixed together in each strand.

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30

Conservative replication model

A proposed mechanism of DNA replication where the original DNA molecule remains intact and a completely new molecule is synthesized.

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31

Components of the replication machine

Helicase, polymerase, clamp loader, primase, ligase, and others involved in the replication process.

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32

Replication timing

The regulation of when and how often replication occurs for each segment of DNA.

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33

Energy of ATP hydrolysis

The energy released when ATP is broken down to ADP, used to power various enzymatic processes during replication.

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34

Centrifugation

A process used to separate DNA based on density or size, as demonstrated in Meselson and Stahl's experiment.

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35

Meselson and Stahl experiment

An experiment that provided evidence for the semi-conservative model of DNA replication.

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36

S-phase

The phase of the cell cycle in which DNA replication occurs.

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37

Newly synthesized strand

The DNA strand that is formed by the addition of nucleotides to the template strand during replication.

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38

Parental strand

The original DNA strand serving as a template for the newly synthesized strand.

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39

Experiment interpretation

The analysis of results obtained from experiments to understand the underlying biological processes.

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40

DNA synthesis initiation

The beginning of DNA replication, which requires the binding of proteins at the replication origins.

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41

Covalent bond

A strong chemical bond formed between atoms by sharing electrons, critical in joining nucleotides.

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