Inflammation and the Immune System

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Last updated 1:51 PM on 9/20/26
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104 Terms

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how does the body protect itself against disease

  • innate immune system

  • inflammation

  • adaptive immune system

  • chronic inflammation


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innate immunity

  • first line of defense

  • the natural defenses in place to provide protection against pathogens and stressors from the environment

  • include physical, mechanical, and biochemical mechanisms designed to mitigate or prevent growth of pathogens and exposure to external stressors

  • in place at birth

  • fast acting


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innate immunity: physical barriers

  • epithelial cells

    • tightly bound

    • line the surfaces of the skin and the GI tract

    • prevent deep penetration by pathogens

  • low temperature of the skin

    • inhibits pathogen growth

  • low pH of the skin and stomach

    • inhibits pathogen growth


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innate immunity: mechanical barriers

  • mechanisms for cleaning pathogens from the surfaces of epithelial cells

    • vomiting → clears pathogens from the GI tract

    • urination → clears pathogens from the GU tract

    • goblet cells of upper respiratory tract → secrete mucous that traps pathogens

      • ciliated cells then brush out the mucous and pathogens


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innate immunity: biochemical barriers

  • substances synthesized by and secreted by epithelial cells designed to trap or destroy pathogens

    • antimicrobial fatty acids and lactic acid → secreted by sebaceous glands of skin

    • antimicrobial peptides → secreted by epithelial cells

    • lysozyme → component of perspiration, tears, and saliva


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innate immunity: normal microbiome

  • bacteria and fungi colonize the surfaces of the body

    • unique to a given area

    • non-pathogenic under normal circumstances

    • compete with other microorganisms for resources and space (block attachment to the epithelium)

      • secrete chemicals (ammonia, etc.) that inhibit growth of pathogens

    • immune system also suppresses growth of normal microbiome (aka normal flora)


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innate immunity: failure due to medications

  • use of broad-spectrum antibiotics can kill the body’s normal microbiome

    • organisms that are resistant to the antibiotic have the opportunity to replicate and may lead to opportunistic infections

      • candida albicans = thrush

      • clostridium difficile = pseudomembranous colitis

    • immunosuppressant medications (meds that block the immune system) can also lead to opportunistic infections


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innate immunity: the genitourinary tract

  • urinary tract is normally sterile

  • urination flushes bacteria from system and disrupts adhesion

  • increased risk of bacterial growth if there is:

    • short urethra

    • reflux/retrograde flow

    • obstruction


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innate immunity: respiratory tract

  • mucociliary blanket lining nose and upper respiratory tract trap microbes (smoking damages this)

  • goblet cells secrete mucous and trap microbes

  • cilia in upper airway move encapsulated bacteria to back of throat where they are swallowed or expelled

  • alveolar macrophages destroy small organisms that travel down airway


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innate immunity: gastrointestinal tract

  • gastric acid destroys pathogens in stomach (creates low pH)

  • viscous mucous layer coats gut and entraps microbes

  • pancreatic enzymes and bile detergents destroy organisms

  • IgA secreted by mucous membranes in gut

  • normal bacterial flora compete with pathogens for nutrients


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inflammation

  • second line of defense

  • programmed response to tissue injury

  • integrated system of humoral (dissolved in blood) and cellular responses designed to:

    • limit tissue damage

    • destroy pathogens

    • initiate adaptive immune system

    • begin healing

  • rapid response in vascularized tissue (begins in seconds)

    • broken into vascular and cellular components


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cells of inflammation: endothelial cells

  • layer of cells lining blood vessels

  • connected to underlying connective tissue

    • release nitric oxide (NO) to promote vasodilation

    • release inflammatory mediators (interleukins, prostaglandins, etc.) to regulate cellular changes during inflammation

    • regulate movement of cells through endothelial layer

    • release tissue factor in response to injury (activates extrinsic pathway of clotting cascade)


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cells of inflammation: mast cells

  • cells that lie in connective tissue near blood vessels

  • when activated, mast cells:

    • degranulate (release inflammatory mediators stored in cellular granules)

      • immediate

      • primarily histamine

    • synthesize new inflammatory mediators

      • delayed


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what is histamine responsible for

(released by mast cells)

  • vasodilation

  • increased capillary permeability

  • bronchoconstriction


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cells of inflammation: neutrophils

  • first phagocytic cells to arrive in inflammation**

  • main function

    • phagocytosis of pathogens

      • these aren’t able to survive the acidic environment of inflammation for long

      • they become a component of purulent exudate (pus)


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what is the first inflammatory mediator in a wound

histamine

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what is the first cell in a wound

neutrophils

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cells of inflammation: eosinophils

  • two main functions

    • defense against parasites

    • regulate changes associated with allergic reactions (mast cells, eosinophils, histamine, etc.)

  • mildly phagocytic

  • worms, wheezes, and weird diseases


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cells of inflammation: dendritic cells

  • aka Langerhan cells

  • link between innate and adaptive immune system

  • two main functions

    • function as antigen-presenting cells (APCs) to initiate adaptive immunity

    • phagocytosis (mild)


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cells of inflammation: monocytes/macrophages

  • monocytes are the precursor to macrophages

  • capable of surviving in acidic environments

    • last longer than neutrophils

  • if it’s in your blood, it is a monocyte

  • if it comes out into the tissues, it is a macrophage


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main functions of monocytes / macrophages

  • clear pathogens and debris from injured tissue/wounds

  • function as antigen-presenting cells (APCs) to initiate adaptive immunity


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chemical mediators of inflammation

  • responsible for coordination of vascular and cellular aspects of inflammation

  • tightly regulated


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chemical mediators of inflammation: histamine

  • first inflammatory mediator released

  • produced by mast cells

  • responsible for

    • vasodilation

    • increased vascular permeability

    • bronchoconstriction (contraction of bronchial smooth muscle)

  • temporary

  • leukotrienes will take over once synthesized


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chemical mediators of inflammation: bradykinin

  • initiated by activation of Hageman factor (factor XII)

  • responsible for

    • vasodilation

    • increased vascular permeability

    • bronchoconstriction

    • pain **


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chemical mediators of inflammation: clotting factors

  • produced by liver

  • induces the clotting cascade

  • chain of events that leads to production of fibrin clot


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chemical mediators of inflammation: complement proteins

  • plasma proteins

  • present in inactive form


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complement proteins as part of inflammation

  • increase vascular permeability

  • promote chemotaxis (movement of cells following concentration gradient)

    • like when u float bc u smell a pie <3


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complement proteins as part of immune system

  • act as opsonins and facilitate phagocytosis

  • create holes in cell membrane of pathogens (membrane attack complex → MAC)

    • basically sprinkles on a pathogen which attract the body’s response to eat the pathogen


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chemical mediators of inflammation: arachidonic acid metabolites

  • fatty acids present in the cell membrane

  • metabolized by one of two pathways

    • cyclooxygenase (COX) pathway

      • produces prostaglandins and thromboxane

        • prostaglandins are responsible for pain

        • thromboxane = platelet aggregation

      • aspirin/NSAIDs block COX pathway

        • will stop you from feeling pain and blood coagulation

    • lipoxygenase pathway

      • produces leukotrienes


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chemical mediators of inflammation: prostaglandins and leukotrienes

promote:

  • vasodilation

  • increased capillary permeability

  • bronchoconstriction


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chemical mediators of inflammation: thromboxane

promotes:

  • platelet aggregation


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chemical mediators of inflammation: IL and TNF

  • interleukins and tumor necrosis factor

    • many kinds

    • some are pro inflammatory (IL-1β, IL-6) **

    • some are anti inflammatory (IL-4, IL-10) **

  • many overlapping functions

    • recruitment and activation of leukocytes (WBCs)

    • induce acute-phase responses of systemic inflammation

      • fever, increased HR, anorexia, increased neutrophils, increased cortisol)


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which IL and TNF are pro inflammatory

(IL-1β, IL-6)

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which IL and TNF are anti inflammatory

(IL-4, IL-10)

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chemical mediators of inflammation: interferons

  • produced by virus-infected cells

  • enhances defense against viruses

  • inhibits DNA/RNA synthesis

  • some active immune cells to destroy viruses


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chemical mediators of inflammation: nitric oxide

  • produced by endothelial cells

  • promotes smooth muscle relaxation and vasodilation


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what are the two types of inflammation

  • acute

  • chronic


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acute inflammation

  • early, short term and self limiting

  • occurs before adaptive immunity can exert its effect

  • designed to remove injurious agent and limit extent of damage

  • neutrophils predominate in first 24 hours


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chronic inflammation

  • late, long-term and self-perpetuating

  • usually the result of recurrent inflammation/irritation or slow processes that falls to induce an acute response

  • macrophages and lymphocytes are more common


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acute inflammation: vascular response

  • following tissue injury

    • initial vasoconstriction (controls loss of blood)

    • vasodilation

      • increase flow of blood to the area

      • makes area warm and red **

    • increased vascular permability

      • endothelial cells contract

      • fluid leaks through gaps between cells → meant to dilute the pathogen

        • initially plasma with little protein (transudate)

        • quickly followed by movement of protein-rich fluid (exudate)

      • outflow of protein draws water from vessels to surrounding tissue (edema)


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what are the stages of cellular response in acute inflammation

  1. endothelial activation

  2. margination

  3. tethering

  4. rolling

  5. firm adhesion

  6. diapedesis/transmigration

  7. chemotaxis

  8. leukocyte activation

  9. phagocytosis


every month thunderstorms rolling from Dallas, Texas can leave puddles


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endothelial activation

  • first stage of acute inflammation cellular response

  • inflammatory mediators (histamine, interleukins, etc.) promote expression of integrins on surface of leukocytes (mostly neutrophils → first responder)

  • also promotes expression of selectins and intracellular adhesion molecules (ICAM) on surface of endothelial cells

  • Endothelial cells have selectins and leukocytes have integrins



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margination

  • second stage of acute inflammation cellular response

  • circulating leukocytes are swept against blood vessel wall


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tethering

  • third stage of acute inflammation cellular response

  • integrins on leukocytes bind loosely to selectins on endothelium


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rolling

  • fourth stage of acute inflammation cellular response

  • leukocytes move from selectin to selectin

    • just rolling across the endothelial cells


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firm adhesion

  • fifth stage of acute inflammation cellular response

  • integrins on leukocyte attach firmly to ICAM

  • after rolling, the leukocyte will eventually come into contact with an intracellular adhesion molecule which traps the leukocyte and stop the rolling


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diapedesis/transmigration

  • sixth stage of acute inflammation cellular response

  • leukocyte moves through gap between endothelial cells


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chemotaxis

  • seventh stage of acute inflammation cellular response

  • leukocytes follow chemical gradient to the site of injury

    • chemicals are released by immune and non-immune cells

  • the smell of pie


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leukocyte activation

  • eighth stage of acute inflammation cellular response

  • a chain of events that leads to attachment of a leukocyte to a pathogen and phagocytosis

    • through one of two ways

      • pattern recognition receptors (PRRs)

      • opsonization


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leukocyte activation via PRRs and PAMPs

  • a way for phagocytic cells to recognize pathogens

  • pattern recognition receptors (PRRs) are toll-like receptors

  • molecules on the surface of phagocytic cells that recognize pathogen-associated molecular patterns (PAMPs) on surface of pathogens

    • PAMPs are not present on mammalian cells

  • PRR attachment to PAMP stimulates activation of the phagocytic cell and phagocytosis


<ul><li><p>a way for phagocytic cells to recognize pathogens </p></li><li><p>pattern recognition receptors (PRRs) are toll-like receptors </p></li><li><p>molecules on the surface of phagocytic cells that recognize pathogen-associated molecular patterns (PAMPs) on surface of pathogens</p><ul><li><p>PAMPs are not present on mammalian cells </p></li></ul></li><li><p>PRR attachment to PAMP stimulates activation of the phagocytic cell and phagocytosis </p></li></ul><p></p>
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leukocyte activation via opsonization

  • ex. complement proteins, cytokines, c-reactive protein

  • soluble molecules that bind to particles on surface of pathogens

  • phagocytic cells bind to opsonins on the surface of pathogen

  • opsonin attachment stimulates activation of the phagocytic cell and phagocytosis


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phagocytosis

  • ninth stage of acute inflammation cellular response

  • engulfment of pathogens by leukocytes

    • engulfment: once activated, pseudopods extend around pathogen and enclose it in a phagocytic vacuole (phagosome)

    • fusion: phagosome merges with lysosome

    • killing of ingested pathogen: enzymes inside of the lysosome degrade the pathogen


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local manifestations of inflammation

  • occur as the result of vasodilation and increased vascular permeability

    • heat → due to vasodilation

    • redness → due to vasodilation

    • swelling → due to increased capillary permeability

    • pain → due to increased capillary permeability

      • exudate compresses nerves in tissue

      • presence of prostaglandins and bradykinin

    • loss of function


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what are the systemic manifestations of inflammation

  • fever → early response induced primarily by IL-1 acting on the hypothalamus

  • leukocytosis

    • increase in leukocytes to fight infection

    • may be accompanied by “left shift” in severe infections

      • most of your WBC get killed off and are replaced by immature cells that aren’t able to fight off pathogens as well

  • plasma protein synthesis

    • fibrinogen, prothrombin, clotting factors, plasminogen, complement proteins, etc. (produced by liver)


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chronic inflammation

  • persistent infections (>2 weeks)

    • acute response may have been unable to control the infection or clear foreign objects (splinter, dirt, asbestos, etc.)

  • also may occur independently

    • some microorganisms can survive and replicate inside phagocytic cells

    • activates chronic inflammation


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what organisms can survive and replicate inside phagocytic cells

  • mycobacterium tuberculosis, mycobacterium leprae, salmonella typhi


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acute vs. chronic inflammation (cell types)

  • acute: characterized by high numbers of neutrophils (but they can’t survive very long)

  • chronic: neutrophils are replaced by macrophages and lymphocytes

    • take over for neutrophils (bc they are stronger)


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what is a granuloma

  • happens during chronic inflammation

  • if macrophages cannot destroy the organism, the body attempts to contain the organism in a granuloma

    • core of macrophages surrounded by lymphocytes

    • may contain fibroblasts that produce collagen

    • may become calcified

    • center of granuloma can become necrotic


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acute inflammation key points

  • fast, early

  • characterized by:

    • infiltration by neutrophils

    • protein rich exudates


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chronic inflammation key points

  • slow, late

  • characterized by:

    • infiltration by macrophages and lymphocytes

    • presence of fibroblasts that secrete collagen

    • can become calcified

    • core can become necrotic


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adaptive immunity

  • third line of defense

  • process designed to create a specialized immune response against a particular pathogen

  • augments protection already in place and prepares long term protection

  • major components

    • cells of adaptive immune system

    • antibodies


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what are the two branches of adaptive immunity

  • cell mediated → mediated by T-lymphocytes

  • humoral → mediated immunoglobulins (antibodies) produced by plasma cells


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antigen presenting cells (APC)

  • immune cells that initiate adaptive immunity

    • macrophages

    • dendritic cells

    • some B lymphocytes

  • bind to an antigen, engulf them, break them down into protein fragments

  • attach a protein fragment to a molecule of major histocompatibility complex (MHC)

  • presents the MHC/protein fragment to T lymphocytes for activation


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major histocompatibility complex (MHC)

  • aka human leukocyte antigen (HLA)

  • glycoproteins on the surface of cells responsible for antigen presentation and helping the immune system differentiate native cells from foreign cells

  • has a groove that accommodates the protein fragment derived from an invading pathogen

  • when the MHC/protein fragment complex of an APC is presented to T-cells, the T-cells become activated


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what are the two main MHC glycoproteins

  • MHC II: on APCs

    • activate CD4+ cells to become T-helper cells

  • MHC I: on all nucleated cells

    • activate CD8+ cells to become cytotoxic T cells


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B lymphocytes

  • part of the adaptive immune system

  • when activated, differentiate into plasma cells and make antibodies


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T lymphocytes

  • part of the adaptive immune system

  • several types differentiated by “cluster of differentiation” (CD) protein on the surface (CD4+ vs CD8+)


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CD4+ T lymphocytes

  • when presented with antigen peptide/MHC II complex by APCs they differentiate into T-helper cells

  • function: regulate adaptive immune system and create memory


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CD8+ T lymphocytes

  • when presented with antigen peptide/MHC I complex by virus infected cells or cancer cells, they differentiate into cytotoxic T cells

  • function: release reactive oxygen species and enzymes to destroy infected cells


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pathogen recognition by T helper cells: cell-mediated immunity

  1. APCs engulf pathogen, break it down, bind a protein fragment to MHC II

  • antigens can be microbial (virus, bacteria, fungi) or non-microbial (plant pollen, poison ivy resin)

  1. APCs present MHC II/antigen complex to CD4+ T lymphocyte

  2. CD4+ cell becomes an active “T-helper cell”


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what does a T-helper cell do

  • cytokines are released that activate B cells

    • B cells become plasma cells which make antibodies (these specific antibodies target the antigen that was presented by the MHC II)

  • cytokines are released to make memory T cells

  • cytokines are released to recruit CD8+ T cells


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cytotoxic T-cell response: cell mediated immunity

  1. recruited CD8+ cells bind to MHC I / antigen complex of infected cell

  2. CD8+ cell becomes an active “cytotoxic T cell”

  3. cytotoxic T cells releases enzymes/cytokines that destroy the infected cell


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humoral immunity

  • dissolve in your blood

  • the immune response is mediated by antibodies

  • antibodies form complexes with antigens

  • complexes may result in precipitation of antigen-antibody complexes, agglutination of pathogens, phagocytosis or lysis of infected cells


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humoral primary immune response

  • first exposure to an antigen

  • slow to develop

  • results in memory B cells


<ul><li><p>first exposure to an antigen</p></li><li><p>slow to develop</p></li><li><p>results in memory B cells </p></li></ul><p></p>
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humoral secondary immune response

  • subsequent exposure to the antigen

  • much quicker response


<ul><li><p>subsequent exposure to the antigen </p></li><li><p>much quicker response </p></li></ul><p></p>
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immunoglobulins

  • aka antibodies

  • proteins produced by plasma cells in response to an antigen

    • IgG

    • IgA

    • IgM

    • IgD

    • IgE


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IgG

  • most abundant (75%)

  • arrives late

    • but stay around after the pathogen is already gone (G=gone) + stays with you the rest of your life

  • binds to infected cells and promotes lysis of infected cells

  • only one that crosses placenta


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IgA

  • common in mucous membranes and secretions

  • provides local immunity


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IgM

  • first to appear in response to antigen

    • for when you are the most miserable

    • fade away and get replaced by IgG

    • promote agglutination of organisms for lysis or phagocytosis


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IgD

  • on B cells

  • required for B cell maturation


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IgE

  • binds to Fc receptors on mast cells releasing histamine

  • inflammation, allergic responses, and parasites

  • eosinophils

    • worms, wheezes, and weird diseases


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active immunity

  • immunity developed by vaccination or having the disease

  • body exposed to antigen and develops IT’S OWN immunity

    • pathogen may be weakened or killed

  • immune system of the host responds by creating antibodies to the antigen (may be a vaccine)

  • long term


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passive immunity

  • immunity is from another

  • fetus is protected by IgG of mother

  • hyperimmune serum (IVIg)

  • short term


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what are the disorders of immune response

  • hypersensitivity disorders

  • transplant rejection

  • autoimmune disease

  • HIV


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hypersensitivity disorders

  • excessive inappropriate activation of immune system

  • 4 types

    • Type I: anaphylactic/atopic/allergic (IgE mediated)

    • Type II: antibody mediated

    • Type III: immune complex mediated

    • Type IV: delayed, t cell-mediated


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type I hypersensitivity: initial exposure

  • IgE mediated, immediate, atopic and anaphylactic

  • rapid allergic reactions (minutes)

  • localized (atopic) → localized edema and vasodilation (rhinitis, food allergies)

  • systemic (anaphylaxis) → widespread edema, vasodilation

  • initial exposure (sensitization)

    • IgE produced by plasma cells in response to antigen

    • IgE binds to mast cells


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Type I Hypersensitivity: subsequent exposure

  • allergen binds to IgE bound to mast cells

  • stimulates release of histamine and other mediators (prostaglandins, leukotrienes, etc.) from mast cells

  • histamine → vasodilation, increased capillary permeability, bronchoconstriction


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type I hypersensitivity: primary/initial phase

  • within 5-30 mins

  • vasodilation

  • increased vascular permeability (leakage)

  • smooth muscle contraction (bronchoconstriction may occur)


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type I hypersensitivity: secondary/late phase

  • onset 2-8 hrs after resolution of initial phase

  • continued vasodilation

  • more intense infiltration with eosinophils and other immune cells

  • chemicals released by eosinophils promote tissue damage

  • severity of reaction depends on degree of sensitization


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Type II hypersensitivity

  • antibody mediated

    • mediated by IgG or IgM (no IgE) directed against target antigens on cells

    • location of the target defines the response

  • examples

    • ABO/Rh incompatibility: antibody binds to cell-surface antigen and causes cell destruction

      • IgM/IgG binding activates complement cascade → lysis of RBC

    • graves disease: antibody binds to TSH receptor on thyroid follicle cells and activates it

    • myasthenia gravis: antibody binds to acetylcholine receptor on skeletal muscle cell and prevents activation


<ul><li><p>antibody mediated</p><ul><li><p>mediated by IgG or IgM (no IgE) directed against target antigens on cells</p></li><li><p>location of the target defines the response</p></li></ul></li><li><p>examples</p><ul><li><p>ABO/Rh incompatibility: antibody binds to cell-surface antigen and causes cell destruction</p><ul><li><p>IgM/IgG binding activates complement cascade → lysis of RBC </p></li></ul></li><li><p>graves disease: antibody binds to TSH receptor on thyroid follicle cells and activates it</p></li><li><p>myasthenia gravis: antibody binds to acetylcholine receptor on skeletal muscle cell and prevents activation </p></li></ul></li></ul><p></p>
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type III hypersensitivity

  • immune complex mediated

    • antigen/antibody complexes formed in bloodstream

    • complexes are eventually deposited in vascular endothelium or extravascular tissue

    • initiates inflammation

  • the location of the deposited antigen-antibody complex defines the response

  • EX

    • systemic lupus erythematosus (SLE)

    • glomerulonephritis


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type IV hypersensitivity

  • delayed or t-cell mediated (no antibodies involved)

    • sensitized T lymphocytes

    • take time to develop, which is why it is “delayed’

    • e.g. contact dermatitis → poison ivy, nickel, etc


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type IV hypersensitivity: initial exposure (sensitization)

  • APCs process antigen (e.g. poison ivy toxin, medication)

  • APCs present antigen to CD4 cells and activate them

  • CD4 cells become t-helper cells and produce memory t-cells


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type IV hypersensitivity: subsequent exposure

  • rapid reactivation of memory t-cells

  • memory t-cells recruit phagocytic cells

    • phagocytic cells destroy tissue

  • memory t-cells activate cytotoxic t-cells

    • cytotoxic t-cells secrete enzymes that destroy tissue directly


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stevens-johnson syndrome

  • rare cutaneous reaction to medications

  • type IV hypersensitivity

  • pathophysiology

    • APCs take a portion of medication, bind it to a molecule of MHC and express it on the surface

    • MHC I / medication complex activates cytotoxic T cells

      • cytotoxic T cells infiltrate tissue and release enzymes that promote cell destruction

    • MHC II / medication complex activates T helper cells

      • recruit macrophages/neutrophils that destroy cells


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transplant rejection

  • process involving cell-mediated and humoral immunity

  • most common is t-cell mediated and is known as cellular rejection

    • donor antigens are presented to recipient T lymphocytes by APCs

    • antibodies will be created that target the donor tissue

    • may be expedited if previously sensitized (ABO mismatch or prior organ rejection)

    • APCs may come from recipient or from the donor


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transplant rejection: direct pathway

  • antigen is pre-processed

  • APCs come from the DONOR

  • T cells (CD4 and CD8) of the RECIPIENT recognize foreign MHC molecules and antigens on the APCs of the DONOR TISSUE

  • T helper cells secrete cytokines that are responsible for 3 things

    • cytotoxic T cells release enzymes and kill foreign tissue


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transplant rejection: indirect pathway

  • antigen needs to be processed first

  • APCs come from the RECIPIENT (host)

  • RECIPIENT APCs process the antigen from DONOR tissue

  • RECIPIENT APCs present antigen to T cells

  • T cells of the RECIPIENT recognize foreign antigen on the APCs and are activated

  • T helper cells secrete cytokines that are responsible for 3 things

    • cytotoxic T cells release enzymes and kill foreign tissue

  • this is a slower reaction


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graft vs host disease

  • cells with functional immune capacity are transplanted into someone who is immunocompromised

  • the grafted tissue (the graft) rejects the recipient (the host)

  • 3 requirements

    • tissue must have functional immune component

    • recipient must have antigens foreign to donated tissue

      • like if you were to get a transplant from someone related to you, it would be less likely for it to be foreign

    • recipient must be immunocompromised

  • t cell mediated


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autoimmune disorders

  • tissue specific (graves disease) or may affect several systems

  • tolerance → the ability of the immune system to differentiate self from non-self

    • central tolerance: apoptosis of autoreactive cells prior to release into circulation

      • t cells removed in the thymus

      • b cells removed in the bone marrow

    • peripheral tolerance: mechanisms in place to eliminate autoreactive cells that escape the thymus or bone marrow