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Normal Microbiota
More bacterial than human cells in the body
– provide some nutrients (vitamin K)
– stimulate immune system, immunity can be cross-reactive against certain pathogens
– Prevent colonization by potential pathogens (as evidenced by antibiotic-associated colitis, by Clostridioides difficile aka “C. diff”)
types of pathogens
primary pathogens
opportunistic pathogens
primary pathogens
cause disease upon infection
not normally associated with host
ex: influenza virus, coronavirus
Opportunistic Pathogens
Cause disease under some circumstances
sometime members of normal microbiota
ex: Candida albicans
progression of disease
transmission
incubation period
illness
convalescence
transmission
infectious dose from 10-10^8 organisms
incubation period
the time from when you are exposed to when you experience symptoms
few days (common cold)
weeks (hepatitis A)
months (rabies)
illness
once you develop the disease
days-chronic
convalescence
feeling healthy again
Clearing + Latency
latent infection
not active disease but it stays with you forever and can become recactivated
kochs postulates
a microbe causes a particular disease
Must fulfill four postulates:
1. Microorganism must be present in every case of the disease
2. Organism must be grown in pure culture from diseased hosts
3. Produce the same disease (in an animal model) from the pure culture
4. Organism recovered from experimentally infected hosts
limitations on koch’s postulates
• Some microorganisms cannot be cultured
• Some diseases have no animal model
• Some infections are polymicrobial
Molecular Postulates
Describe virulence factors
Four postulates:
1. Virulence gene or its product must be present
2. Virulence gene must transform a non-pathogen into a pathogen
3. Virulence gene must be expressed during disease process
4. Antibodies against gene products should be protective
why microbiology?
causes dental caries, periodontal disease, and soft tissue infections
You will encounter various oral infections in your practice
Recognize oral manifestations of systemic infections
Be familiar with transmission of disease and its ramifications (When are patients infectious?)
Immunizations (Can recommend patients to prevent infectious diseases)
familiar with treatment effects of treatment on host and microbiota (Antibiotics)
Understanding your patient (Immunocompromised, medically compromised, elderly, pregnant)
Training to be a health care provider not a technician
Must be able to relate oral health to overall health and vice versa
Will be conversing with physicians about medical consultations
Personal/family protection through awareness of infectious disease
establishing an infection
encounter
adherance
colonization
molecule delivery
encounter
– fecal-oral (cholera)
– human-human (tuberculosis, COVID-19)
– animal-human (rabies)
– vector-borne (plague, lyme disease)
– environmental contact (anthrax)
2. Adherence
– Prevents early clearance (like peeing or coughing it out)
– Often bind host tissues via pili
– Specificity can determine host range of pathogen
3. Colonization
multiplication and maintainance in host
Competes with normal microbiota
Resist:
• bile
• stomach acid
• peristalsis
• skin secretions
• IgA (mucosal antibodies)
• compete with host for iron
4. Molecule Delivery
Affects target cell structure and host response
can suppress cytokine production
Invasion: Breaching Anatomical Barriers
Skin: tough barrier, rely on wounds or insect vectors
Crossing mucous membrane requires invasion
e.g. intestinal epithelial cells
Use bacterial surface molecules to drive invasion into cells, sometimes through cells (transcytosis) or between cells
Invasiveness
the ability of the microorganism to invade human tissues
enzymes pathogens use to invade the host
hyaluronidase
lecithinase
collagenase
fibrinolysin
Hyaluronidase
“spreading factor”, to get into deeper tissue
breaks down extracellular matrix (ECM)
– Staphylococcus, Streptococcus pyogenes
Lecithinase
breaks down host cell membranes
Clostridium perfringens
Collagenase
collagen is in connective tissue
makes up 25-35% of total body protein
C. perfringens
Fibrinolysin
disrupt fibrin clots that wall off infection
– streptococci, staphylococci
Invasins
proteins that can directly mediate cell invasion
Zippering Model of Bacterial Invasion
Tight ligand-receptor interactions direct uptake
“one at a time” uptake
ruffling method of bacterial invasion
Bacteria induce a cellular response of membrane rearrangements
Can lead to co-invasion of other bacteria in close proximity
M cell Invasion (ADD PICS FROM SLIDES)
M cells are a portal to the immune system embedded into mucosal surfaces
Important site of “antigen sampling”
Some pathogens use the phagocytic nature of M cells to access deeper tissues by transcytosis
DONE BY SHINGELLA SPECIES (KNOW)
M cell invasion by _______ species
shigella cross the mucous membrane into tissues by passing through M cells (transcytosis)
macrophages engulf bacteria + shigella grows inside of the macrophage + kills it
pathogen is released + infects neighboring cells
move cell to cell using actin fillaments
transcytosis
large molecules are packaged in vessicles + transported to the other side of the cell
Avoiding the Host Defenses
1. Hiding within host cells
avoid complement killing
avoiding phagocytosis
1. Hiding within host cells
Avoid exposure to host antibodies if remain intracellular
Access to rich source of nutrients
ex: shigella, antibody mediated immunity is not effective but cell mediated immunity is
cell to cell spreading
Shigella and Listeria species lyse out of vacuole
assemble actin at pole
actin propels them into neighboring cell
“convergent evolution”
convergent evolution
two bacteria solved the same problem differently
ex: shigella + lysteria
2. Avoiding complement killing
Complement factors in blood serum can assemble into MAC “membrane attack complex” that are bactericidal
C3b is first component of complex to bind
Some bacteria bind host factors that regulate C3b activity, prevent MAC assembly
“serum-resistance”
“serum-resistance”
bacteria can recruit host proteases that degrade C3b
Inhibition of Complement-Mediated Killing
C3b attaches to bacterial surface
other complement proteins attach to the C3B → complement cascade pokes holes in cells
we have complement regulatory proteins for our cells to prevent the other complement proteins from binding to CB3
pathogens have found a way to do this
MAC (membrane attack complex)
bactericidal complement complex
final MAC assembly → cell lyses + contents are released
complement regulatory proteins block these steps
3. Avoiding phagocytosis
Innate immune cells engulf (phagocytose) and kill microorganisms with degradative enzymes
Can block signaling molecule production or degrade them after production to prevent influx of immune cells
• C5a cleaved by C5a peptidase of Streptococcus pyogenes (strep throat)
Can produce cytotoxins/hemolysins that lyse immune cells
Capsule production on surface of bacteria → C3b inactivation
Blocks engulfment of C3b opsonized bacteria by host complement receptors
M protein of Streptococcus: also inactivates C3b
Bacterial Fc receptors: bind antibodies and orient dangerous end away from bacteria
• Found in Streptococcus pyogenes (Protein G) and
Staphylococcus aureus (Protein A)
bacterial fc receptor protein a
staphylococcus aureus has protein A on its surface which will bing to the FC portion of the antibody → it cannot bind to receptors on the cells
Survival Strategies within Phagocytes: Phagosomal escape
lyse out of vacuole and grow in cytoplasm of host cell
ex: Shigella species + Bacillus anthracis (Anthrax)
Survival Strategies within Phagocytes: Blocking lysosomal fusion
prevent delivery of degradative enzymes to bacterial compartment
Mycobacterium (tuberculosis)
Survival Strategies within Phagocytes: Surviving in phagolysosomes
Surviving in phagolysosomes after lysosomal fusion
ex: Coxiella
avoiding antibodies: igA protease
cleaves Ab’s found in mucosal secretions (Neisseria gonorrhoeae)
Antigenic variation
turning pili On and Off, or switching to new pilus
avoiding antibodies: Mimicking the host
look like self-antigens
Streptococcus pyogenes has capsule of hyaluronic acid, also made by host tissues
avoiding antibodies: bacterial Fc receptors
bind antibodies and orient dangerous end away from bacteria
– Streptococcus pyogenes (Protein G)
– Staphylococcus aureus (Protein A)