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Order of life
Biosphere, Ecosystem, Community, Population, Organism, Organ, Tissue, Cell, Organelles, Molecule
Reductionism
Simplified version of complex model
Prokaryotic
Single cell, not membrane-bound; Bacteria and Archaea
Eukaryotic
Membrane-bound
Proteomics and Genomics
Study of Proteins and Study of Genomics
Feedback Regulation
Output becomes input; Negative and positive feedback loops from AP Bio
Scientific Name
Genus, Species
Cohesion
H bonds between water
Adhesion
H bond to non water
Thermal Energy
Volume dependent kinetic mvt measurement
Temperature
Average kinetic mvt.
High Specific Heat causes ___ because ___
Heat of vaporization, evaporative cooling, less dense as solid; H bonds
Water is universal solvent because
polarity
Hydration shell
Water molecules dissolving ion
Acid
more H+; removes OH-
Base
accepts H+
Buffer
Acid + Base to add/remove H+
pH Equation
-log[H+]
Change pH by 1 →
change acidity by x10
[H+][OH-] =
10-14
Carbon bonding property
4 way bond
Hydrocarbons
Molecule of only Hydrogen + Carbon
Isomer
Same composition, different conformation
Structural Isomer
Different carbon skeleton
Cis isomer
Functional group on same side
Trans isomer
Functional group on opposite side
Enantiomers
mirrored structure because asymmetric carbon
Functional groups property
hydrophilic except sulfhydryl
Hydroxyl
-OH; alcohol
Carbonyl
>C=O; Ketone(in skeleton); Aldehyde(end of skeleton)
Carboxyl
-COOH; Carboxylic/Organic Acid
Amino
-NH2; Amine
Sulfhydyrl
-SH; Thiol
Phosphate
-OPO3-2; Organic Phosphate
Methyl
-CH3; Methylated Compound; Biological tag
Macromolecule/Polymer
Linked monomers
Enzymes
Speed up synthesis/breakdown
Dehydration
H + OH → H2O
Hydrolysis
H2O → H + OH
Carbohydrate Types
Monosaccharide, Disaccharide, Polysaccharide
Monosaccharide
Has C=O and -OH; ends in “-ose”
Disaccharide
2 monosaccharides linked with glycosidic linkage
Storage Polysaccharide
Starch (plant): amylose (unbranched) and amylopectin (branched)
Glycogen (animal): in liver and muscles
Structure Polysaccharide
Cellulose (plant): alpha (OH same side), beta (OH opposites)
Chitin (animal): exoskeleton
Branched vs unbranched
Branched more reactive
Lipids diff bc
not macromolecule
Fat
glycerol + 3 fatty acids
Fatty acid
carbon skeleton + carboxyl
Saturated fatty acid
all hydrogen filled
Unsaturated
Double bond kink (cis) → bend
Phospholipid
2 fatty acids + phosphate + choline(charged)
Steroid
4 fused carbon rings → cholesterol and sex hormones
Proteins
Structure, defense, enzymes
Globular Protein
spherical
Fibrous Protein
long fiber
Intrinsically disordered
No 3D shape prior to interaction
X-ray crystallography
Diffraction of light from crystal → 3D structure