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What lipids are only found in the mycobacterium genus
Mycolic Acids
What are is the characteristic of mycobacterium cell wall
Waxy, hydrophobic
What is the characteristic of acid fast bacteria
Ability to resist decoloration by acids
What are AFB cell walls resistant to
Environmental stresses, disinfectants, usual stains and acid, nutrient uptake, host defense, antibiotics
What genuses display acid fastness
Genus mycobacterium and Genus Nordcardia
How is acid fastness diagnosed
Acid fast stain + microscopic examination, biochemical tests + molecular diagnostic test
Which acid fast stain does Myobacterium use
Acid fast stain
Which acid fast stain does Norcardia use
Modified Acid fast stain
What is the primary dye used in acid fast
Carbon fuchsin
What is the counter stain used in acid fast
Methylene blue
When a non acid fast bacterium is dyed with a counter stain, what color would it turn
From Red (from the primary dye) to blue
What color does acid fast bacteria by counter stain
Remains red
What is used as the decolorizer in acid fast
3% HCL in 95% ethyl alcohol
What decolorizer is used for a modified acid fast stain
1% H2SO4 in 95% ethyl alcohol
What color would a non acid fast bacteria turn after being exposed to decolorizer
Colorless
What is the difference between the KInyoun and Ziehl-Nielsen acid fast methods
Kinyoun is cold, Ziehl Nielsen is hot
What bacteria does NOT grow on media
M leprae
1-9 AFB in 100 fields
Report actual number of AFB seen
10-99 AFB in 100 fields
Report as 1+
1-10 AFB per field (at least 50 visual fields)
Report as 2+
>10 AFB per field (at least 20 visual fields)
Report as 3+
Auramine Method 1-2 ARB in 1 length
Confirm before reporting
Auramine 3-24 AFB in 1 length
Record actual number
Auramine 1-6 AFB in 1 length
Report a 1+
7-60 AFB per field in 1 length
Report as 2+
>60 AFB per field 1 length
Report as 3+
What can acid fastness also be attributed to
Structures that are NOT bacteria; eg endospores, head of sperm etc
What is the pathogenesis of MTBC
Internalized in phagolysosome → MTBC inhibit acidification → Hemolysin cause lysis → Escape out of macrophage → Granuloma formation → Fibroblast surround and cause caseous necrosis
What is Mtb
Causes TB, AEROBE, has mycolic acid, grows slowly, cordlike, cause delayed hypersensitivity
How is Mtb transmitted
Droplet which goes to bronchus
Clinical features of Mtb
Weight loss, night sweats, malaise, anorexia, fever
Mtb Lab diag
sputum, CSF, lymph node, gastric aspirate samples; AFB and cultivation or phenotypic DST, amplification
What are MOTT/ NTM
Mycobacteria that are not TB
Positive niacin test
Yellow color; mycobacterium positive
Positive Nitrate reduction test
White to red; mycobacterium positive
Positive Citrate utilization test
Green to blue; positive mycobacterium
Positive Tween 80 test
Orange to pink; positive mycobacterium
Iron uptake from medium meaning
Mycobacteria present and take up iron from media
Positive tellurite reduction test
Black precipitate; mycobacterium positive
Positive Urea hydrolysis test
Yellow to red; mycobacterium positive
What color do group I (photochromogens) atypical mycobacteria produce
Yellow orange
What color do group II (scotochromogens) atypical mycobacteria produce
Color in the dark
What color do group III (nonchromogens) atypical mycobacteria produce
Barely any with/without light
What is are group I atypical mycobacterium
M. kansasii and M. marinum
What is M. kansasii
Cause lung disease like TB; cause pulmonary, cervical lymphadenitis, cutaneous disseminated infeciton
What is M. marinum
Swimming pool granuloma/fish tank granuloma; causes granulomatous lesions on skin
What M species in Group II atypical mycobacterium
M. scrofulaceum
What is M. scrofulaceum
Causes scrofula (granulomatous cervical adenitis in children); goes from oropharynx into lymph nodes; in SOIL, WATER and RAW DAIRY
What species in group III atypical mycobacterium
M. avium, intracellulare complex (M. avium and M. intracellulate) and M. ulcerans
What is the characteristic of group III atypical mycobacterium
Difficult to distinguish, cannot be diff from TB, found in immunocompromised patients; anti TB drug RESISTANT
What is M avium
Inhalation or ingestion of contaminated food; causes cervical lymphadenitis
What is M ulcerans
Cause buruli ulcer; no fevers or malaise
What is Group IV mycobacterium
Rapidly growing; rarely cause disease; resistant to anti Tb drugs; skin and soft tissue infection
What species in group IV mycobacterium
M fortuitum chelonae complex (M. fortuitum and M. chelonei)
What is M. fortuitum
Grows in damp soil; no pigment
What is M. chelonei
Weakly gram +, similar to corynebacterium species; cutaneous infections
What is M. leprae
Strongly acid fast, ONLY GROWS IN MOUSE FOOT PADS; CANNOT BE CULTURED
What are the symptoms that can indicated leprosy
Diagnosis needs only 2/3 or ½ of symptoms: Lesion, loss of sensitivity, nerve enlarging, positive AFB (by split skin smear)
What is the spread of M leprae
Spread by droplet, direct skin, breast milk, insect bites
how does M leprae cause skin damage
Direct contact with bacterium or CMI attack on nerves
What is tuberculoid (paucibacillary) leprosy
Very AFB, nerve damage caused by CMIR, positive lepromin skin test, granulomas
What is lepromatous (multibacillary) leprosy
Poor CMIR, negative lepromin skin test; leonine facies and ENL development
What is the pathogenesis of M. leprae
Through respiratory tract → Bacilli multiply in Schwann cells → Good or bad response → Disability/deformity
What is paucibacillary leprosy
1-5 skin lesions
What is multibacillary leprosy
6+ skin lesions
Treatment for leprosy
Dapsone
What is characteristic of actinomyces
Form long branching filaments, weakly AFB
What is actinomyces spp
Causes actinomycosis; anaerobe part of NF in oral cavity, catalase negative
What are the clinical findings of A israelii
Lesion is hard non tender that slowly drains pus through sinus tract; hard sulfur granules in pus; face and neck lesions; not communicable
What are the 5 major forms of A. isaraelii
Local: Cerivicofacial, abdominal; Implantation: mycetoma; inhalation: thoracic; disseminated disease
What characteristic of nocardia spp
Causes nocardiosis; inhibit phagosome-lysosome function; gram + and weakly AFB; uses MODIFIED acid fast
What are the cutaneous infections of nocardia spp
Mycetoma (abscess in sinus tract with sulfur granules); lymphocutaneous infection; superficial cellulitis and potential systemic spread
What is nocardia spp
AEROBES, found in soil; weakly AFB by modified Kinyoun; thin branching filaments
What is the clinical signs of pulmonary nocardia infection
Inhalation; similar to TB; productive cough, shortness of breath, chest pain, hemoptysis, fever, night sweat, weight loss and progressive fatigue
What is the clinical signs of brain abscess in nocardia infection
Most common extrapulmonary infection location; headache, nausea, vomiting, seizures or altered mental status
What is cutaneous nocardiosis
Cause primary cutaneous infection; cellulitis, skin abscess, nodule, ulcer; mycetoma
What is N. asteroids
Has a wet soil odor; gram + branching filamentous rod
What is N. brasiliensis
Common in southeast US; diff from N asteroides by hydrolysis of casein tyrosine and gelatin