6A/B - Forensics + Microorganisms and Immunity

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How to use the extent of decomposition in order to determine a time of death.

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1

How to use the extent of decomposition in order to determine a time of death.

  • Autolysis - tissues break down due to the actions of enzymes

  • Putrefaction begins - skin turns green around abdomen reddish-green → purplish black

  • Bacteria causes gas + liquid bubbles → bloating

  • bloating passes - liquified tissues seep out of body + body dries out

<ul><li><p>Autolysis - tissues break down due to the actions of enzymes</p></li><li><p>Putrefaction begins - skin turns green around abdomen reddish-green → purplish black</p></li><li><p>Bacteria causes gas + liquid bubbles → bloating</p></li><li><p>bloating passes - liquified tissues seep out of body + body dries out</p><p></p></li></ul><p></p>
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2

How to use stage of succession for TOD

  • immediately after conditions are optimum for bacteria

  • bacteria decompose tissue → favourable for flies and larvae

  • fly larvae feed on body → favourable for beetles

  • body dries → less fav for flies, beetles stay to decompose dry tissue

  • no tissue=not favourable for most

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3

How can forensic entomology be used to determine the time of death.

  • TOD cane be estimated by the life cycle of the insect

  • blowfly larvae hatch from eggs about 24 hours after being laid

  • If only eggs are found on a body you could estimate a TOD no more than 24 hours.

  • Different conditions will affect an insects life cycle.

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4

How is body temperature used to determine a TOD.

  • From TOD metabolic reactions slow down and eventually stop

  • Temperature falls + equals surroundings=Algor mortis

  • Human bodies cool at around 1.5-2.0°C /hr

  • Conditions such as: air temperature, clothing and body weight affect temperature.

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5

How can degree of muscle contraction be used to determine TOD.

  • about 4-6 hours after death the body stiffens=rigor mortis

  • respiration still takes place in the cell buts its anaerobic → lactic acid buildup

  • pH decreases → inhibits enzymes that produce ATP

  • No ATP means bonds in muscle cells fix and body stiffens.

  • smaller muscles first + is faster at higher temp

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6

What’s the role of micro-organisms in the decomposition of organic matter and the recycling of carbon.

  • Important part of the carbon cycle

  • microorganisms on+in the body secrete enzymes that decompose dead organic matter int o small molecules they can respire

  • Methane and Co2 are released→ recycles carbon back to atmosphere.

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7

How is DNA profiling used for identification and determining genetic relationships between organisms

  • A DNA profile is a fingerprint of someone’s DNA

  • Everyone’s DNA is different therefore everyone’s DNA profile is unique

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8

How can DNA be amplified using PCR

  • The DNA mixture is heated to 95°C → break hydrogen bonds between the strands

  • Mixture cooled 65°C so primers can anneal to the strands (primers start signal where to start synthesising the DNA

  • heated to 72°C so polymerase can work (lines up+ complementary base pairing)

  • Two new copies are formed+1 cycle complete

  • Cycle restarts and strands double each time.

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9

Where are virus’s genetic material stored

They contain a core of nucleic acid which is either DNA or RNA

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10

What are attachment proteins?

They stick out from the virus’s capsid and allow it to cling on to a host cell

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11

What is an envelope?

An extra outer layer stolen from the previous host cell.

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12

What is the capsid

The protein coat surrounding the core

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13

Compare the structures of bacteria and viruses

  • Bacteria are single celled whilst viruses are non cellular particles

  • both have no nucleus

  • both can cause disease

  • bacteria reproduce by binary fission, viruses invade host cells

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14

Explain the role of DNA primers in the production of the amplified 345bp sequence (2)

  • Primers have a specific base sequence

  • Bind to complementary bases

  • Therefore providing a site for DNA polymerase

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15

Explain why the amplified DNA fragments for the G20210A allele and the wild type allele are different (3)

  • The restriction enzyme cuts at a specific site

  • that is only present in the G20210A allele

  • therefore a shorter fragment is produced for G20210A

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16

Devise an investigation to determine the optimum number of cycles for the polymerase chain reaction used to amplify the DNA for this test.

  • Make the mixture, DNA polymerase added in excess

  • Control the temperature

  • change the number of cycles

  • use gel electrophoresis to determine amount of DNA produced

  • choose the smallest number of cycles that produce a band

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17

Describe a study for the changes in insect species on a body after death with pigs (3)

  • Control variable: same mass/size/age

  • Temperature monitored to make sure its the same

  • record the presence of different species every 24 hours

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18

Explain how the results of a pig study could be used to help establish the TOD of a human (insects) (3)

  • Record which insects are present on the human and compare with the results of the pig

  • Take into account which stages of the life cycle are present

  • When using stage of succession to determine TOD environmental variables need to be taken into account

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19

Explain the effect of ambient temperature on the rate of decomposition (3)

  • The higher the ambient temperature the higher the rate of decomposition

  • Enzymes in bacteria will have more kinetic energy and decompose faster

  • Increases growth rate of bacteria/fungi

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20

How does (HIV) infect human cells, causing a sequence of symptoms that may result in death.

  • HIV invades T-helper cells within the immune system

  • GP120 bind to the CD4 receptors on the surface of the t-helper cel

  • The viral enveleope fuses with teh T-heleper cell membrane enabling viral RNA to enter

  • Reverse transcriptase turns RNA into DNA → integrates into the hosts DNA

  • This allows it to be transcribed to produce new virus proteins

  • Those new viruses leave cell killing it and taking some cell membrane

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21

Describe the progression of HIV into AIDS. (Acute→Latent→disease)

  • HIV antibodies appear in blood after 3-12 weeks

  • rapid replication of virus plus loss of T-helper cells

  • T-helper cells are recognised by killer cells which start to destroy them and reduces rate of replication

  • dormant diseases like TB can reactivate

  • immune system vulnerable (below 200 WBC per mm2 blood)

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22

How do pathogens enter the body

  • Cuts

  • Digestive system (food)

  • Respiratory system

  • Mucosal surfaces

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23

What barriers are in the body to protect from infection

  • Stomach acid → kills pathogens

  • Skin → physical barrier

  • Gut+skin flora → Compete with pathogens for nutrients

  • Lysozyme→ mucosal surfaces

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24

Describe the non-specific immune response.

  • Site becomes inflammed (immune system recognise foreign material

  • vasodilation → increasing blood flow to site also increasing permeability

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