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What are biochemical tests used for in microbiology?
to identify microorganisms based on their enzymatic and metabolic activities
What are agar plate tests used to detect?
the presence of exoenzymes
enzymes secreted outside the cell
What are examples of agar plate tests for exoenzymes?
lipase test
milk agar test
starch agar test
What do tube media tests detect?
other metabolic processes inside the bacterial cell
What are examples of tube media tests?
litmus milk
sugar fermentation broth
kligler’s iron agar
What is litmus milk test used for?
to test multiple metabolic activities of bacteria in milk-based media
What are the main components of litmus milk medium?
lactose
casein and other peptones
litmus (pH indicator)
What processes does the litmus milk test detect?
fermentation of lactose
metabolism of proteins
degradation of casein
litmus reduction
How many types of reactions can be observed in the litmus milk test?
five
What are the litmus milk reactions?
acid production
alkaline production
curd formation
reduction (redox)
proteolysis
What happens when bacteria ferment lactose in litmus milk?
acids are produced, which lower the pH of the medium
What color changes indicates lactose fermentation in litmus milk?
the litmus milk turns pink at acidic pH
What causes the pH drop during lactose fermentation in litmus milk?
the production of acidic byproducts from lactose metabolism
What happens when bacteria deaminate peptones in litmus milk?
ammonia is released into the solution
How does ammonia release affect the pH of the litmus milk medium?
it raises the pH, making the solution alkaline
What color change indicates peptone deamination in litmus milk?
the medium turns blue
Why is the blue color from peptone deamination in litmus milk often seen only at the top of the tube?
because peptone deamination is oxygen-dependent, so it occurs near the surface where oxygen is
When does litmus function as a pH indicator in litmus milk?
only when its in an oxidized redox state
What happens to the litmus indicator when it is reduced?
it loses its color
medium turns white
What causes the litmus milk to turn white?
the bacterial culture creates a reducing environment, causing the litmus indicator to be reduced
Why does a colored band often remain at the top of the litmus milk tube?
because oxygen near the surface re-oxidizes the litmus indicator, restoring its color at the top
What enzyme do some bacteria produce that causes proteolysis in litmus milk?
caseinase
What happens when casein is degraded in litmus milk?
the milk turns clear
What is another name for proteolysis in litmus milk?
peptonization
What causes curding in litmus milk?
acid produced from lactose fermentation denatures milk proteins
How can curds appear in litmus milk?
complete curd: milk fully solidifies
incomplete curd: milk becomes lumpy or semi-solid
Does curding always occur when acid is produced?
no, acid production does not always lead to curding
What does penol red (PR) sugar fermentation broth test for?
the ability of an organism to ferment a specific sugar
What sugars can be included in PR broth?
glucose
lactose
or mannitol
What indicators are used in PR broth?
phenol red (pH indicator)
durham tube (gas detection)
What happens if an organism ferments the sugar?
phenol red turns yellow (acid production)
gas may be produced (bubble in Durham tube)
What happens if an organism cannot ferment the sugar?
peptone degradation releases ammonia
phenol red changes to cerise color (alkaline reaction)
What metabolic activities does Kliglers Iron agar (KIA) test for?
lactose fermentation
glucose fermentation
sulfur reduction
What are the carbohydrate sources in KIA?
1.0% lactose
0.1% glucose
What other ingredient provides ammonia and sulfur in KIA?
1.0% peptone (from cysteine metabolism)
What indicators are used in KIA?
phenol red for pH changes
iron (from ferric ammonium citrate) which reacts with H2S to form a black precipitate
What sugars are present in KIA and in what concentrations?
glucose 0.1%
lactose 1.0%
What happens when peptone is broken down in the presence of oxygen in KIA?
ammonia (NH3) is released, which can raise the pH
What occurs if both glucose and lactose are fermented in KIA?
acid products are produced in excess of NH3, turning the entire tube yellow
Why does the tube turn yellow when both sugars are fermented in KIA?
the acid from sugar fermentation lowers the pH, overwhelming any alkaline effect from NH3
How is gas production detected in KIA?
by lifting or cracking of the agar in the tube
What causes the lifting/cracking of the media in KIA tubes?
accumulation of fermentation gases produced by the bacteria
What happens when only glucose is fermented in KIA?
the NH3 produced from peptone breakdown exceeds the acid from glucose fermentation on the slant
Where does peptone breakdown occur in the KIA tube?
only in the presence of oxygen
mainly at the slant
What is the pH of the slant during glucose-only fermentation in KIA?
neutral or alkaline, due to NH3 production from peptone deamination
What happens to the butt of the KIA tube during glucose-only fermentation?
it stays yellow because oxygen cannot penetrate, so acid from glucose fermentation remains
What is reversion in KIA?
when some lactose-fermenting bacteria produce weaker acids that can be oxidized to neutral end products, causing part of the slant to return to neutral/alkaline pH
Which bacteria commonly show reversion in KIA?
enterobacter aerogenes
What fermentation pathway leads to reversion?
2,3-butanediol fermentation pathway
Why do 2,3-butanediol products cause reversion?
they are less stable than mixed acid fermentation products (lactate, acetate, succinate, formate) and can be neutralized in aerobic environments
Is the lipase plate selective or differential?
differential media
What enzyme does the lipase plate test for?
lipase, which hydrolyzes fats into glycerol and fatty acids
What indicator is used in the lipase plate?
spirit blue
How is a positive result indicated on a lipase plate?
dark blue zone around the growth with no oily surfaces
What indicates a negative result on a lipase plate?
no color change around the growth
Is milk agar selective or differential?
differential media
What enzyme does milk agar test for?
caseinase, which hydrolyzes casein (milk protein) into amino acids
How does casein affect the appearance of milk?
casein gives milk its white color
How is a positive result indicated on milk agar?
clearing around the colony (loss of white color)
How is a negative result indicated on milk agar?
no clearing around the colony
Is starch agar selective or differential?
differential media
What enzyme does starch agar test for?
amylase, which breaks down starch into simple sugars
What indicator is used on starch agar?
iodine
How does iodine indicate the presence of starch?
iodine reacts with starch to produce a purple color
How is a positive result (starch hydrolysis) shown?
clear zone around the colony after adding iodine
How is a negative result with starch agar shown?
no clear zone
medium turns purple where starch is present