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Classical complement pathway trigger
C1 binds antigen-antibody complex (IgG/IgM)
Lectin complement pathway trigger
Mannose-binding lectin binds mannose on microbe surface
Alternative complement pathway trigger
Spontaneous C3 hydrolysis, C3b binds pathogen directly
What all 3 complement pathways converge on
C3 convertase
C3b function
Opsonization - coats bacteria for phagocytosis
C3a and C5a function
Anaphylatoxins - mast cell degranulation, inflammation
C5a additional function
Most potent neutrophil chemotaxis signal
C5b-9 function
Membrane Attack Complex (MAC) - lyses pathogen, especially gram-negative
C1 esterase inhibitor deficiency causes
Hereditary angioedema
C3 deficiency causes
Severe recurrent pyogenic infections
C5-C9 (terminal/MAC) deficiency causes
Recurrent Neisseria infections specifically
DAF/CD55 deficiency causes
Paroxysmal nocturnal hemoglobinuria (PNH)
Toll-like receptors (TLRs) location
Plasma membrane and endosomal membrane
Toll-like receptors (TLRs) function
Bind PAMPs, trigger NF-kB, inflammatory cytokines
NOD-like receptors (NLRs) location
Cytosol
NOD-like receptors (NLRs) function
Sense intracellular bacterial products, form the inflammasome
Inflammasome function
Activates caspase-1, cleaves pro-IL-1beta to active IL-1beta
RIG-like receptors (RLRs) function
Sense viral RNA, trigger interferon production
IgG unique feature
Only antibody that crosses the placenta
IgG primarily targets
Systemic bacteria and viruses (long-term/secondary response)
IgM structure
Pentamer
IgM primarily targets
Bloodstream pathogens/bacteremia, first responder, best complement fixation
IgA structure and location
Dimer with secretory component; mucosal surfaces, breast milk
IgA primarily targets
Mucosal pathogens (GI, respiratory, GU tract)
IgE binds to
Mast cells and basophils
IgE primarily targets
Parasites/helminths; also drives Type I hypersensitivity/allergy
IgD function
Naive B cell surface antigen receptor
V(D)J recombination enzymes
RAG1 and RAG2
Enzyme that adds junctional diversity in V(D)J recombination
TdT (terminal deoxynucleotidyl transferase)
Somatic hypermutation occurs where
Germinal center, causes affinity maturation
Class switch recombination requires
CD40L-CD40 interaction plus cytokines
Cytokine that induces class switch to IgE
IL-4
Cytokine that induces class switch to IgG
IFN-gamma
MHC Class I expressed on
All nucleated cells
MHC Class I presents to
CD8+ T cells
MHC Class I antigen source
Endogenous (intracellular - viral, tumor) via proteasome and TAP transporter
MHC Class II expressed on
Professional APCs only (macrophages, dendritic cells, B cells)
MHC Class II presents to
CD4+ T cells
MHC Class II antigen source
Exogenous (extracellular, phagocytosed) via lysosomal degradation
CD4 binds
MHC Class II
CD8 binds
MHC Class I
Bare Lymphocyte Syndrome Type I defect
TAP1 or TAP2 mutation - no MHC I
Bare Lymphocyte Syndrome Type I presentation
Chronic respiratory infections, bronchiectasis, normal antibodies
Bare Lymphocyte Syndrome Type II defect
CIITA or RFX mutation - no MHC II
Bare Lymphocyte Syndrome Type II presentation
Defective CD4+ T cell development, SCID-like severe immunodeficiency
Positive selection occurs where
Thymic cortex
Positive selection function
T cells that weakly bind self-MHC survive; others die by neglect
Negative selection occurs where
Thymic medulla
Negative selection function
T cells that bind self-MHC+self-peptide too strongly are deleted (central tolerance)
Gene that controls negative selection
AIRE gene - drives expression of peripheral tissue antigens in thymus
AIRE gene deficiency causes
APECED/APS-1 (Autoimmune Polyendocrine Syndrome type 1)
APECED/APS-1 classic triad
Chronic mucocutaneous candidiasis, hypoparathyroidism, adrenal insufficiency
T cell activation Signal 1
TCR binds peptide-MHC complex
T cell activation Signal 2 (costimulation)
CD28 (T cell) binds B7/CD80-86 (APC)
T cell without costimulation signal becomes
Anergic (unresponsive)
CTLA-4 function
Inhibitory receptor, competes with CD28 for B7, downregulates T cell response
Th1 induced by
IL-12, IFN-gamma
Th1 produces
IFN-gamma
Th1 function
Activates macrophages, fights intracellular pathogens
Th2 induced by
IL-4
Th2 produces
IL-4, IL-5, IL-13
Th2 function
Activates eosinophils/B cells (IgE), fights parasites, allergy
Th17 induced by
IL-6, TGF-beta, IL-23
Th17 produces
IL-17
Th17 function
Neutrophil recruitment, fights extracellular bacteria/fungi
Treg induced by
TGF-beta, IL-2
Treg produces
IL-10, TGF-beta
Treg function
Immune suppression, peripheral tolerance, marker is FoxP3
T-dependent antigens
Protein antigens, need T cell help, get class switching/memory/affinity maturation
T-independent antigens
Polysaccharides (e.g. bacterial capsules), activate B cells directly, IgM only, no memory, weak response in kids under 2
Why conjugate vaccines exist
Attach polysaccharide to protein to recruit T cell help in young children
IL-1 source and function
Macrophages; fever, inflammation (endogenous pyrogen)
IL-2 source and function
Th cells; T cell proliferation
IL-6 source and function
Macrophages; fever, acute phase protein production in liver
IL-8 source and function
Macrophages; neutrophil chemotaxis
IL-10 source and function
Treg/macrophages; anti-inflammatory, inhibits Th1/macrophages
IL-12 source and function
Macrophages/DCs; drives Th1 differentiation, activates NK cells
TNF-alpha source and function
Macrophages; fever, inflammation, septic shock, cachexia
IFN-gamma source and function
Th1, NK, CD8 T cells; activates macrophages, increases MHC expression, antiviral
Live attenuated vaccine examples
MMR, Varicella, Oral polio (Sabin), Yellow fever, Rotavirus
Live attenuated vaccine contraindication
Pregnancy, immunocompromised patients
Inactivated/killed vaccine examples
Injectable polio (Salk), Hepatitis A, Rabies, Flu shot
Conjugate vaccine examples
Pneumococcal conjugate, Hib
Conjugate vaccine mechanism
Polysaccharide + protein carrier to recruit T cell help in children
Toxoid vaccine examples
Tetanus, Diphtheria
Toxoid vaccine mechanism
Inactivated toxin, generates antitoxin antibodies
X-linked agammaglobulinemia (Bruton) defect
BTK mutation, no B cell maturation
X-linked agammaglobulinemia (Bruton) presentation
Recurrent bacterial infections after ~6mo, no B cells, no tonsils
Selective IgA deficiency risk
Anaphylaxis to blood products (anti-IgA antibodies react to donor IgA)
DiGeorge syndrome defect
22q11 deletion, thymic aplasia
DiGeorge syndrome presentation
T cell deficiency, hypocalcemia (no parathyroids), cardiac defects - CATCH-22
X-linked SCID defect
IL2RG (common gamma chain) mutation
X-linked SCID presentation
T-B+NK- , severe combined immunodeficiency
ADA deficiency SCID mechanism
Adenosine deaminase deficiency causes toxic metabolite buildup
ADA deficiency SCID presentation
T-B-NK-
Wiskott-Aldrich syndrome defect
WASP gene, X-linked, cytoskeleton defect
Wiskott-Aldrich syndrome triad
Eczema, thrombocytopenia (small platelets), recurrent infections
Chronic Granulomatous Disease (CGD) defect
NADPH oxidase defect, no respiratory burst
Chronic Granulomatous Disease (CGD) presentation
Catalase-positive organism infections (Staph aureus, Aspergillus)
Chronic Granulomatous Disease (CGD) diagnostic test
Negative nitroblue tetrazolium (NBT) test