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Cognitive bias
Errors in thinking
- Overconfidence bias
- Confirmation bias
- Anchoring effect
- Overgeneralization
Confirmation bias
Seek out and process information that is consistent with existing beliefs
Anchoring effect
Reliance on first piece of information to make future decisions even if it is irrelevant
Model
Help us understand patterns in complex systems...See and communicate patterns by simplifying and removing noise
Statistics
Allow us to describe, understand, and predict without perfect information or guessing
Pilot data
Preliminary study (not in publication)
Hypothesis
- Clearly stated postulated description of how an experimental system works
- Proposed explanation for a phenomenon; not the absolute truth; assumption; potential "suspect"
- Testable, falsifiable, and specific
Null hypothesis
- The assumption of no pattern
- Combats human tendency to see patterns even when they don't exist
Alternative hypothesis
The hypothesis that states there is a difference between two or more sets of data
Scientific prediction
If [insert hypothesis] is false/not false, then I predict that my experiment will show [insert results of data analysis from experiment here]
Numeric data
Continuous, count, circular, ranked/scale is in the middle
Non-numeric data
Categorical, binomial
Missing values
NA or Null
Tidy data
1. Each variable forms a column
2. Each observation forms a row
3. Each type of observational unit forms a table
Scatterplots
relationship between 2 variables
Line graphs
relationship between 2 variables - 1 variable is ordered (usually time)
Histograms
distribution of 1 numerical variable (numerical value on x-axis)
Boxplots
distribution of 1 numerical variable
Barplots
comparing different categories (1 variable)
Violin plots
side-by-side comparison of multiple histograms
Heat maps
use color to show correlation
Statistical graphics
mapping of data variables to aesthetic attributes of geometric objects
Descriptive statistics
taking a dataset and calculating a set of summary measurements that simply communicate important (but incomplete) information
Mean
average
[X1 + X2 + ...Xn]/n
Median
the middle of all the ranked values
Mode
the most common value
Robust
an overall measure being resistant to single values
Anscombe's Quartet
four data sets that have nearly identical simple descriptive statistics, yet have very different distributions and appear very different when graphed
-Don't forget - Always plot!
Range
Xmax - Xmin = Range
IQR (interquartile range)
X75% - X25% = IQR
(Boxplots use IQR)
Variance
standard deviation squared
Standard Deviation
the square root of the variance (because same unit as data values)
Normal distribution
bell-shaped curve, symmetric about the mean, showing that data near the mean are more frequent in occurrence than data far from the mean
Central Limit Theorem
The theory that, as sample size increases, the distribution of sample means of size n, randomly selected, approaches a normal distribution.
Standard error of the mean
variability in sample means
- tells you how accurate your estimate of the real mean is likely to be
- true mean is unknown
- always true regardless of underlying distribution of data (CLT)
Standard deviation
variability in data points
- experimental mean is known
- only true if the population is normally distributed
95% confidence interval
There is a 95% chance that the true mean is within your 95% CI
- Sample mean +/- 1.96 the SEM
- +/- 1 SEM = CI of 68.26%
Parametric tests
powerful tests that see patterns from lots of assumptions
- Robust to non-normality
T test
ANOVA
Chi-squared
Homoscedasticity
Equal variance
Heteroscedasticity
Unequal variance
Skewness
measure of symmetry, or more precisely, the lack of symmetry
Kurtosis
measure of whether the data are heavy-tailed or light-tailed relative to a normal distribution
- Platykurtic
- Leptokurtic
The Kolmogorov-Smirnov Test
Testing data for normality
- Compare our data to the ideal distribution
- Weak to data with many repeating values and weak to small sample sizes
The Shapiro-Wilks Test
- Weak to data with many repeating values and weak to small sample sizes
The D'Agostino's K-squared Test
Specific to the normal distribution. Complex but powerful
Error
- Data - model = error
- Error = random chance (stats) + bias (exp design)
Bias
Error that skews conclusions in a particular direction
Models
A set pattern based on prior knowledge and assumptions
Randomness
Error that does not skew conclusions in one direction or another
Objective
Research questions
Methods
Variables
Sample Size and Selection
Procedure
Statistical analysis