BISC220 Lecture 1 & 2

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where do you find protons?

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1

where do you find protons?

clustered in nucleus

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2

what’s the charge of a proton?

positive charge

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3

where do you find neutrons?

clustered in nucleus

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4

what’s the charge of a neutron?

neutral charge

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5

where do you find electrons?

scattered around nucleus in valence shells

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6

what’s the charge of an electron?

negative charge

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7

what’s a valence shell?

outermost regions of an atom where electrons can exist

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8

how many electrons needed to fill innermost valence shell?

2

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9

how many electrons needed to fill all valence shells after the innermost shell?

8

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10

when is an atom considered unstable?

when valence shells are incomplete

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11

what are ions?

atoms with an electrical charge

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12

what do ions do?

signal and maintain balance of bodily fluids in biology

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13

what are isotopes?

atoms that have an uneven number of neutrons relative to the number of protons

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14

what happens to isotopes overtime?

they’re radioactive, so they decay overtime and emit energy

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15

what’s an isomer?

compounds that share the same chemical formula, but may vary in structural arrangement

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16

what are the different types of isomers?

structural, geometric, enantiomers

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17

what’s a structural isomer?

they exhibit different arrangements of the atoms that make up the compound

<p>they exhibit different arrangements of the atoms that make up the compound</p>
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18

what’s a geometric isomer?

they exhibit different angle/orientation based on the presence of single or double covalent bonds

<p>they exhibit different angle/orientation based on the presence of single or double covalent bonds</p>
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19

what’s an enantiomer?

“mirror images” of one another. particularly useful in pharmacology

<p>“mirror images” of one another. particularly useful in pharmacology</p>
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20

elements most important to biology

CHONPS: carbon, hydrogen, oxygen, nitrogen, phosphorus, sulfur

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21

what’s an ionic bond?

metal (usually a cation) and nonmetal (usually an anion) elements form a bond. metal donates an electron to the nonmental, relationship typically uneven.

<p>metal (usually a cation) and nonmetal (usually an anion) elements form a bond. metal donates an electron to the nonmental, relationship typically uneven.</p>
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22

what are common examples of ionic bonds?

sodium chloride (NaCl, table salt), sodium hydroxide (NaOH, bleach)

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23

what’s a covalent bond?

two nonmetals bond. sharing of electrons, relationship somewhat equal

<p>two nonmetals bond. sharing of electrons, relationship somewhat equal</p>
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24

what are common examples of covalent bonds?

Dihydrogen oxide (H2O, water), methane (CH4)

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25

why can hydrogen form hydrogen bonds?

hydrogen is the smallest element on Earth, so it can form special transient bonds

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26

what are the properties of water?

  1. water is polar

  2. universal solvent

  3. high heat capacity

  4. high heat of vaporization

  5. high cohesion + adhesion

  6. less dense as a solid than as a liquid

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27

how does hydrogen affect pH?

more hydrogen ions (H+)- more acidic (pH<7)

more hydroxide ions (OH-)- more basic (pH<7)

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28

what’s a monomer?

a single chemical unit, or a building block for a larger molecule

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29

what’s a polymer?

a molecule that consists of several monomers bound together

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30

what are carbohydrates?

a class of macromolecules that are commonly known as sugars. Composed of CHO. Some carbohydrates are known as saccharides.

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31

MIGHT NEED TO KNOW?

TYPES OF POLYSACCHARIDES

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32

MIGHT NEED TO KNOW?

PROTEIN STRUCTURE OF AMINO ACIDS (TABLE IN SLIDES)

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33

what are lipids?

class of macromolecule that are commonly known as fats. composed exclusively of CH. not water soluble because their chemical structure makes them a nonpolar covalent molecule.

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34

can nonpolar molecules dissolve in polar molecules?

no. e.g nonpolar molecules can’t dissolve in water, a polar molecule. “like dissolves like”.

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35

what are 3 common lipids?

triglyceride, phospholipid, steroid

<p>triglyceride, phospholipid, steroid</p>
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36

what is the structure of a saturated fatty acid?

CHO, no double bonds

<p>CHO, no double bonds</p>
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37

what is the structure of an unsaturated trans fatty acid?

CHO, double bond, H atoms opposite

<p>CHO, double bond, H atoms opposite</p>
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38

what is the structure of an unsaturated cis fatty acid?

CHO, double bond, H atoms same side, bent configuration

<p>CHO, double bond, H atoms same side, bent configuration</p>
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39

what are proteins (peptides)?

largest and most important class of macromolecules. CHON minimum elements required, sometimes contains S

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40

what’s the monomer for proteins?

amino acids. can bind together to form polymer (polypeptide)

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41

how many naturally occurring amino acids important for life on Earth are there?

20

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42

what are the different types of protein structure?

primary, secondary, tertiary, quaternary

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43

what is primary protein structure?

polypeptide chain

<p>polypeptide chain</p>
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44

what is secondary protein structure?

alpha helix + beta sheets produced by hydrogen bonds forming within the polypeptide

<p>alpha helix + beta sheets produced by hydrogen bonds forming within the polypeptide</p>
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45

what is tertiary protein structure?

3D overall fold of the protein containing secondary structures

<p>3D overall fold of the protein containing secondary structures</p>
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46

what is quaternary protein structure?

multi-subunit complex where each unit is a distinct polypeptide chain

<p>multi-subunit complex where each unit is a distinct polypeptide chain</p>
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47

what’s an enzyme?

a special type of protein that performs a catalytic function- reduces the energy threshold required for a specific reaction to occur, allowing the reaction to proceed at a faster rate. can be anabolic or catabolic.

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48

what are nucleic acids?

a group of macromolecules that include several important, high-energy compounds for cells, including Adenosine Triphosphate (ATP). CHONP.

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49

what is a nucleotide?

a common monomer for nucleic acids consisting of a nitrogenous base, a phosphate group (PO4-), and a sugar (typically ribose)

<p>a common monomer for nucleic acids consisting of a nitrogenous base, a phosphate group (PO4-), and a sugar (typically ribose)</p>
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50

Compare DNA & RNA

DNA: double stranded, Thymine, No oxygen on sugar

RNA: single stranded, Uracil, Oxygen on sugar

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51

what is the central dogma of biology?

Genetic information flows from DNA to RNA to Polypeptide through transcription and translation

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