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3 main types of intercellular signaling
autocrine
paracrine
endocrine
Autocrine signaling
cell responds to its own signal
Paracrine signaling
short-range signaling between nearby cells
Endocrine signaling
long-range signaling via the bloodstream
Signal transduction
cascade where one protein changes the enxt to relay and amplify a message that alters cell activity
How do proteins change others typically in signal transduciton?
by phosphorylation
What enzymes add and remove phosphates in signaling?
kinases: add
phosphatases: remove
Common effects of protein phosphorylation
activation of enzymes
interaction/location alterations
trigger degradation
change function depending on cell type
G-protein-coupled receptors (GPCRs) structure
seven transmembrane alpha-helices that interact with hetertimeric G proteins (a, b, g)
GPCRs activation
ligand binding
receptor shape change
GPD on Ga replaced with GTP
Ga dissociates form Gbg
Activates effector enzyme
What ends GPCR signaling?
Ga hydrolyzes GTP —> GDP; RGS proteins accelerate this hydrolysis
Desensitization
GRK phosphorylates active receptors; arrestins bind phosphorylated GPCRs, preventing further G protein activation
Resensitization
after internalization, GPCRs can be dephosphorylated and recycled back to the membrane
Receptor Protein-Tyrosine Kinases
single-pass membrane proteins with cytoplasmic kinase domain
Ligand-Gated Ion Channels
Ion flow changes membrane potential
Steroid Hormone Recepotrs
Cytoplasmic or nuclear ligand-regulated transription factors
Immune receptors
B- and T-cell receptors
Second Messenger
Small intracellular molecule that amplifies a signal from a first messenger (ligand)
Common second messengers
cAMP
Ca2+
IP3
DAG
cGMP
NO
How is cAMP produced?
ligand —> GPCR —> Ga activates adenylyl cyclase —> ATP —> cAMP
What does cAMP activate?
protein kinase A
Protein Kinase A
phosphorylates target proteins to alter metabolism after gene expression
What hormones raise blood glucose via cAMP?
glucagon and epinephrine
Describe the cascade
hormone binds receptor
Ga activates adenylyl cyclase
cAMP
PKA
phosphorylase kinase
glycogen phosphorylase
glucose release
Why is this cascade so powerful?
each step amplifies the signal, so one hormone molecule can release thousands of glucose units
What do protein-tyrosine kinases do?
phosphorylate tyrosine residues on target proteins to trigger signaling pathways
Two classes of PTKs
receptor PTKs
non-receptor (cytoplasmic) PTKs
How are RTKs activated?
ligand binding
receptor dimerization
trans-autophosphorylation of tyrosines on each other’s cytoplasmic domains
What do SH2 and PTB domain proteins do?
Bind phosphorylated tyrosines
What do SH2 and PTB domain proteins function as?
Adaptors, docking proteins, signaling enzymes, or transcription factors
How is RTK signaling terminated?
Receptor internalization via clatrhin-mediated endocytosis and ubiquitin tagging for lysosomal degredation/recycling
What is Ras?
A small GTPase anchored to the plasma membrane; switches between active GTP and inactive GDP forms
How is RAS activated?
RTK —> adaptor Grb2 —> GEF (Sos) —> GDP —> GTP exchange on Ras
What enzymes control Ras activity?
GAPs
GEFs
GDIs
GAPS
accelerate GPT hydrolysis (off)
GEFs
stimulate GDP —> GTP (on)
GDIs
hold GDP-bound Ras inactive
Describe the MAP kinase cascade
Ras —> Raf —> MEK —> ERK —> transcription factors —> gene expression for cell growth & differentiation
Why is RAS clinically important?
Mutations that prevent GTP hydrolysis keep Ras active —> uncontrolled cell division —> 30% of cancers
Convergence
different receptors activate the same pathway
Divergence
A single stimulus sends signals through multiple pathways to produce different responses
Cross-talk
interaction between signaling pathways
Apotosis
orderly cell-death process
What does apoptosis cause?
cell shrinkage
loss of adhesion
DNA fragmentation
phagocytic clearance
What enzymes execute apoptosis?
Caspases (proteases) that cleave key proteins like kinase, lamins, cytoskeletal proteins, and CAD (DNase)
Why is apoptosis important in development and health?
shapes organs
removes damaged cells
An imbalance caused by apoptosis leads to
cancer or neurodegenerative disease