A3.2 Classification and Cladistics

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State 4 reasons why classification is needed

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1

State 4 reasons why classification is needed

  1. To retrieve and store info

  2. Identification

  3. Predicting traits

  4. Finding evolutionary origins

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2

Why is classification useful for predictive values?

As traits are shared within a species

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3

Why is classification useful for finding evolutionary origins?

If a group of organism share traits, links could be made to their origin

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4

Name the taxa in order

Kingdom, Phylum, Class, Order, Family, Genus, Species

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5

What is the name of the process of assigning organisms to taxa?

Taxonomy

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6

What are the drawbacks to the taxa heirachy?

  • can be unclear how populations should be grouped into

  • disagreements on how to group species into larger groups

  • disagreements on the rank of taxa

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7

Why do biologists have doubt about the heirachy of taxa?

Because taxonomy is arbitrary

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8

What do biologists agree is the ideal means of classification follows?

Evolutionary relationships

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9

Following the classification dependant on evolutionary relationships, what do all taxanomic groups share?

A common ancestor

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10

What are the two criteria which need to be met to judge whether classification follows evolutionary relationships

  • Every organism that has evolved from a common ancestor is included in the taxanomic group

  • Every taxanomic group has evolved from a common ancestor

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11

What do taxanomic groups share if they are descended from a common ancestor?

Similar characteristics

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12

Why is it useful for Biologists when taxanomic groups have evolved from the same common ancestor?

Because they can predict characteristics within a group

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13

What is the alternative to classifying according to taxa?

To classify using clades

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14

Define clade

A group of organisms that have evolved from a common ancestor

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15

What is the most objective way of classifying organisms into clades?

By comparing the base sequences of genes or amino acid sequences in proteins

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16

If it using base sequences of genes or amino acid sequence is unavailable, what is another way of classifying organisms into clades?

Using morpholigical traits

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17

Do all species only belong to one clade?

No

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18

Explain how species can be part of different clades?

Smaller clades are nested in larger clades

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19

What causes a change in DNA base sequences or amino acid sequences?

Mutations

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20

What can we use to find when a set of species shared a common ancestor?

By finding the difference in number of mutations

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21

What do we assume when using mutations to calculate when species have diverged from a common ancestor?

That mutations occur at a common rate

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22

What is the process of dating divergences of species from common ancestors using mutations called?

The molecular clock

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23

What is a cladogram?

A branching diagram that represents ancestor-descendant relationships

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24

What about cladograms is useful when dating species?

It shows the sequence of divergence

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25

What is a terminal branch?

The ends that represent an individual clade (species or group of species that are not subdivided)

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26

What is a node?

The point at which a hypothetical ancestral species split to form two or more clades

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27

What is a root?

The starting point of a cladogram that represents the hypothetical common ancestor of the entire clade

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28

Give an example of a species that was re-classified after the use of base sequencing

The figwort family

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29

What happened to classification after the use of base sequencing?

Many species were "re-classified”

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30

Before 1977, what were the two recognised domains?

Prokaryote and eukaryote

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31

After 1977, what was the prokaryote domain split into?

Archaea and eubacteria

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32

Currently, what are the three domains?

Archaea, eubacteria, and eukaryotes

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33

What are the components of te binomial naming system?

Genus + species

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34

What is introgression?

The process by which hybrids form over many generations with an unequal distribution from each species

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35

What is backcrossing?

When a hybrid species reproduces with a species of one of their parents

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36

What is a clade also known as?

A monophyletic group

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37

What is a sister group?

A group of closest relatives on a cladogram

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38

What is an outgroup?

A group that is less closely related to others in a cladogram

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39

What is a derived trait?

characteristics that have evolved recently

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40

What is another name for a derived trait?

Apomorphic

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41

What is a primative trait?

characteristics that evolved early

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42

What is another name for a primative trait?

A plesiomorphic trait

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43

What is phylogeny?

Study of the evolutionary past of species

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44

What is phylogenetics?

Methods used to anylise relationships and study phylogeny

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45

What are archaea?

Single celled organisms often found in extreme conditions

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46

What are archaea found in extreme conditions called?

Extremophiles

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47

What are the three types of extremophiles?

  • Halophiles: salt loving

  • Thermophiles: heat loving

  • Methanophiles: methane loving

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48

Where are halophiles found?

In the dead sea or salt mines

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49

Where are thermophiles found?

In hot springs or hydrothermal vents

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50

Where are methanophiles found?

In landfills, marhses, paddy fields,…

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