Topic 3: Genetics

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What is a gene?

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1

What is a gene?

A heritable factor that consists of a sequence of DNA and influences a specific trait

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2

What is the locus?

The position of a gene on a chromosome?

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3

What are alleles?

The alternate forms of a gene that code for the different variations of a specific trait

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4

How are new alleles formed?

Gene mutations

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5

What is the correlation between genetic complexity, chromosome numbers, genome size, and number of genes?

None

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6

What is a genome?

The totality of the genetic information in an organism, including all genes and non-coding sequences

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7

What was the Human Genome Project?

A mapping of the entire base sequence of the human genes:

  • Human cells typically have 46 chromosomes

  • The human genome consists of ~3 billion base pairs

  • It contains roughly 21,000 genes (estimates vary)

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8

When was the Human Genome Project completed?

2003

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9

What is a gene mutation?

A change in the base sequence of a section of DNA coding for a particular characteristic that can be beneficial, detrimental, or neutral

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10

How can gene mutations be described?

  • Somatic → occurs in a body cell and affects a tissue

  • Germline → occurs in a gamete and affects offspring

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11

What could mutations include?

  • Substitutions → silent, missense, or nonsense

  • Frameshifts → insertions or deletions

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12

How do mutations occur?

They can occur spontaneously as copying errors during DNA replication or can be induced by mutagenic agents

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13

What is the cause of sickle cell anemia?

A base substitution of GAG → GUG at the 6th codon of ß-haemoglobin resulting in the amino acid change from glutamic acid to valine

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14

What are the consequences of sickle cell anemia?

  • Alters haemoglobin structure → forms insoluble strands

  • Cannot transport oxygen effectively → causing fatigue

  • Red blood cells adopt a sickle shape → may form clots

  • Sickle cells are destroyed at a higher rate → anemia

<ul><li><p>Alters haemoglobin structure → forms insoluble strands</p></li><li><p>Cannot transport oxygen effectively → causing fatigue</p></li><li><p>Red blood cells adopt a sickle shape → may form clots</p></li><li><p>Sickle cells are destroyed at a higher rate → anemia</p></li></ul>
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15

What is the ‘heterozygous advantage’ in sickle cell anemia?

Sickle cell anemia is a co-dominant trait and heterozygous individuals demonstrate an increased resistance to malaria

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16

How do chromosomes present in prokaryotes?

Prokaryotes:

  • Have a single circular molecule made of naked DNA (DNA without proteins)

  • May have additional plasmids (autonomous DNA units)

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17

How do chromosomes present in eukaryotes?

Eukaryotes:

  • Have multiple linear DNA molecules packaged with histones (proteins)

  • Do not have plasmids (unless genetically modified)

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18

What is autoradiography?

A technique for measuring the length of DNA molecules when uncoiled

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19

Who developed autoradiography?

John Cairn

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20

How does autoradiography work?

  • Radioactive thymidine is incorporated into a cell’s DNA

  • Chromosomes were fixed to a photographic surface and treated with silver bromide (AgBr)

  • Radiation converts silver ions into insoluble grains that are visible via electron microscopy when a film is developed

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21

What does diploid mean?

2 sets of chromosomes

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22

What does haploid mean?

1 set of chromosomes

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23

What cells in humans are haploid?

Sex cells/gametes

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24

How many pairs of chromosomes do humans have?

23

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25

What type of chromosomes are 22 pairs out of 23 for humans?

Homologous autosomes

  • Each pair has identical genes and loci

  • Alleles may differ (one from each parent)

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26

What type of chromosomes are the 23rd pair in humans?

Sex chromosomes

  • Females have two X chromosomes (XX)

    • Males have X and Y chromosomes (XY)

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27

What does the Y chromosome do?

Develop the male sex characteristics

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28

Who determines the sex of the a baby, the mother or the father?

The father

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29

What are homologous chromosomes?

Paired chromosomes inherited from both parents in sexually reproducing animals with the same genes at identical loci positions, however specific alleles may different

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30

What is a characteristic genetic feature of species?

The chromosome number

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31

What do karyotypes do?

They identify the number and types of chromosomes in a cell

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32

How is karyotyping used during pregnancy?

Karyotyping is performed pre-natally to identify the sex of offspring or diagnose potential chromosome abnormalities

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33

What occurs during amniocentesis?

  • Cells are collected from the amniotic fluid of the pregnant mother

  • Conducted at ~16 weeks with a slight risk of miscarriage (~0.5%)

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34

What occurs during chorionic villi sampling?

  • Cells are collected directly from the placental tissue

  • Conducted at ~11 weeks with a higher risk of miscarriage (~1%)

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35

What does a karyogram show?

The chromosomes of a cell in homologous pairs of decreasing length

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36

What is meiosis?

The reduction division of a diploid cell to produce four haploid cells (gametes) that are genetically distinct; involves two divisions:

  • Meiosis I separates homologous chromosomes

  • Meiosis II separates sister chromatids

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37

What are the differences between mitosis and meiosis?

DISCO PUG

Divisions → one in mitosis, two in meiosis
Independent assortment → no in mitosis, yes in metaphase I
Synapsis → no in mitosis, yes in meiosis (bivalents/tetrads)
Crossing over → no in mitosis, yes in prophase I
Outcome → two cells in mitosis, four in meiosis

Ploidy → dipoid-diploid in mitosis, diploid-haploid in meiosis
Use → body cells in mitosis, sex cells in meiosis
Genetics → identical in mitosis, variant in meiosis

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38

What occurs during crossing over?

  • Crossing over occur via synapsis in prophase I

  • Homologous chromosomes form bivalents (or tetrads)

  • Chiasmata represent the points where genetic information has been exchanged between the homologous pair

  • The non-sister chromatids that have exchanged DNA are called recombinants

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39

What occurs during random assortment?

  • The homologous pairs orient randomly in metaphase I

  • This means there is an equal chance of a resulting gamete containing either the maternal or paternal chromosome

  • As humans have a haploid number of 23, there are 223 potential gamete combinations (>8 million)

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40

What is non-disjunction?

The failing of chromosomes to separate, resulting in gametes with extra or missing chromosomes involving either the homologous pairs in anaphase I or the sister chromatids in anaphase II

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41

What happens if non-disjunction occrs?

If a gamete with an extra chromosome fuses with a normal gamete, the resulting zygote will have three copies (ex. trisomy 21)

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42

What influences the chances of non-disjunction?

Parental age → older parents are at higher risk of non-disjunction events

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43

Who established the principles of inheritance?

Gregor Mendel

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44

What discoveries did Mendel make?

  • Organisms have heritable factors (genes)

  • Parents contribute equally to inheritance by supplying one version of the gene each (alleles)

  • Gametes contain only one allele of each gene (haploid)

  • Fusion of gametes results in zygotes with two alleles of each gene (diploid)

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45

What is a genotype?

The allele combination for a specific trait

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46

What are the three possible types of allele combinations?

  • Homozygous → both alleles are the same

  • Heterozygous → alleles are different

  • Hemizygous → only one allele

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47

What is a phenotype?

The physical expression of a specific trait determined by genotype and environmental factors

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48

What are the two modes of inheritance?

Complete dominance and codominance

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49

What is complete dominance?

When one allele is expressed over another

  • Dominant allele is expressed in heterozygote

  • Recessive allele is masked in heterozygote

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50

What is co-dominance?

When both alleles are equally expressed in the phenotype

  • Heterozygotes have a distinct phenotype

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51

What is an example of an autosomal recessive disease?

Cystic fibrosis:

  • Cystic fibrosis is caused by a mutated CFTR gene

  • Produces thick mucus that clogs airways and causes respiratory issues

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52

What is an example of an autosomal dominant disease?

Huntington’s disease:

  • Huntington’s disease is caused by a mutated HTT gene

  • An amplification of CAG repeats leads to neurodegeneration

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53

What is an example of an autosomal codominant disease?

Sickle cell anemia:

  • Sickle cell anemia is caused by a mutated HBB gene

  • Sickling of blood cells leads to anemia and other complications

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54

What is the result of radiation exposure?

Radiation and mutagenic chemicals increase mutation rates and can cause genetic diseases

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55

What are two examples of radiation exposure?

  • Nuclear bombing of Hiroshima (1945)

  • Chernobyl (1986)

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56

What are long term consequences of radiation exposure?

  • Increased incidents of cancer

  • Reduced immunity due to lowered t cell count

  • Congenital abnormalities (Chernobyl only)

  • Variety of organ-specific health effects

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