AP Biology Unit 1: Chemistry of Life Key Terms

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122 Terms

1

acid

molecule that donates hydrogen ions and increases the concentration of hydrogen ions in a solution

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adhesion

attraction between molecules of different substances

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example of adhesion

Attraction between water molecules and molecules that make up the inside of a xylem tube

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aliphatic hydrocarbon

hydrocarbon consisting of a linear chain of carbon atoms

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anion

negative ion that is formed by an atom gaining one or more electrons

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aromatic hydrocarbon

hydrocarbon consisting of closed rings of carbon atoms

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atom

the smallest unit of matter that retains all of the chemical properties of an element

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8

atomic mass

calculated mean of the mass number for an element's isotopes

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9

atomic number

total number of protons in an atom

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10

balanced chemical equation

statement of a chemical reaction with the number of each type of atom equalized for both the products and reactants

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11

base

molecule that donates hydroxide ions or otherwise binds excess hydrogen ions and decreases the concentration of hydrogen ions in a solution

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12

buffer

substance that resists a change in pH by absorbing or releasing hydrogen or hydroxide ions

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13

calorie

amount of heat required to change the temperature of one gram of water by one degree Celsius

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14

capillary action

occurs because water molecules are attracted to charges on the inner surfaces of narrow tubular structures such as glass tubes, drawing the water molecules to the sides of the tubes

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15

cation

positive ion that is formed by an atom losing one or more electrons

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16

chemical bond

interaction between two or more of the same or different atoms that results in the formation of molecules

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17

chemical reaction

process leading to the rearrangement of atoms in molecules

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18

chemical reactivity

the ability to combine and to chemically bond with each other

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19

cohesion

intermolecular forces between water molecules caused by the polar nature of water; responsible for surface tension

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20

compound

substance composed of molecules consisting of atoms of at least two different elements

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21

covalent bond

type of strong bond formed between two atoms of the same or different elements; forms when electrons are shared between atoms

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22

dissociation

release of an ion from a molecule such that the original molecule now consists of an ion and the charged remains of the original, such as when water dissociates into H+ and OH-

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23

electrolyte

ion necessary for nerve impulse conduction, muscle contractions and water balance

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24

electron

negatively charged subatomic particle that resides outside of the nucleus in the electron orbital; lacks functional mass and has a negative charge of -1 unit

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25

electron configuration

arrangement of electrons in an atom's electron shell

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26

electron orbital

how electrons are spatially distributed surrounding the nucleus; the area where an electron is most likely to be found

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electron transfer

movement of electrons from one element to another; important in creation of ionic bonds

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electronegativity

ability of some elements to attract electrons (often of hydrogen atoms), acquiring partial negative charges in molecules and creating partial positive charges on the hydrogen atoms

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29

element

one of 118 unique substances that cannot be broken down into smaller substances; each element has unique properties and a specified number of protons

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30

enantiomers

molecules that share overall structure and bonding patterns, but differ in how the atoms are three dimensionally placed such that they are mirror images of each other

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31

equilibrium

steady state of relative reactant and product concentration in reversible chemical reactions in a closed system

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32

evaporation

separation of individual molecules from the surface of a body of water, leaves of a plant, or the skin of an organism

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33

functional group

group of atoms that provides or imparts a specific function to a carbon skeleton

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34

geometric isomer

isomer with similar bonding patterns differing in the placement of atoms alongside a double covalent bond

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35

heat of vaporization of water

high amount of energy required for liquid water to turn into water vapor

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36

hydrocarbon

molecule that consists only of carbon and hydrogen

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37

hydrogen bond

weak bond between slightly positively charged hydrogen atoms to slightly negatively charged atoms in other molecules

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38

hydrophilic

describes ions or polar molecules that interact well with other polar molecules such as water

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39

hydrophobic

describes uncharged non-polar molecules that do not interact well with polar molecules such as water

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40

inert gas (noble gas)

element with filled outer electron shell that is unreactive with other atoms

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41

ion

atom or chemical group that does not contain equal numbers of protons and electrons

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ionic bond

chemical bond that forms between ions with opposite charges (cations and anions)

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43

irreversible chemical reaction

chemical reaction where reactants proceed uni-directionally to form products

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44

isomers

molecules that differ from one another even though they share the same chemical formula

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45

isotope

one or more forms of an element that have different numbers of neutrons

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46

law of mass action

chemical law stating that the rate of a reaction is proportional to the concentration of the reacting substances

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47

litmus paper

(also, pH paper) filter paper that has been treated with a natural water-soluble dye that changes its color as the pH of the environment changes so it can be used as a pH indicator

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48

mass number

total number of protons and neutrons in an atom

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49

matter

anything that has mass and occupies space

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50

molecule

two or more atoms chemically bonded together

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51

neutron

uncharged particle that resides in the nucleus of an atom; has a mass of one amu

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52

nonpolar covalent bond

type of covalent bond that forms between atoms when electrons are shared equally between them

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53

nucleus

core of an atom; contains protons and neutrons

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54

octet rule

rule that atoms are most stable when they hold eight electrons in their outermost shells

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orbital

region surrounding the nucleus; contains electrons

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organic molecule

any molecule containing carbon (except carbon dioxide)

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periodic table

organizational chart of elements indicating the atomic number and atomic mass of each element; provides key information about the properties of the elements

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pH scale

scale ranging from zero to 14 that is inversely proportional to the concentration of hydrogen ions in a solution

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59

polar covalent bond

type of covalent bond that forms as a result of unequal sharing of electrons, resulting in the creation of slightly positive and slightly negative charged regions of the molecule

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product

molecule found on the right side of a chemical equation

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proton

positively charged particle that resides in the atom's nucleus; has a mass of one amu and a charge of +1

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radioisotope

isotope that emits radiation composed of subatomic particles to form more stable elements

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reactant

molecule found on the left side of a chemical equation

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reversible chemical reaction

chemical reaction that functions bi-directionally, where products may turn into reactants if their concentration is great enough

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solvent

substance capable of dissolving another substance

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66

specific heat capacity

the amount of heat one gram of a substance must absorb or lose to change its temperature by one degree Celsius

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67

sphere of hydration

when polar water molecules surround charged or polar molecules thus keeping them dissolved and in solution

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68

structural isomers

molecules that share a chemical formula but differ in the placement of their chemical bonds

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69

substituted hydrocarbon

hydrocarbon chain or ring containing an atom of another element in place of one of the backbone carbons

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70

surface tension

tension at the surface of a body of liquid that prevents the molecules from separating; created by the attractive cohesive forces between the molecules of the liquid

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71

valence shell

outermost shell of an atom

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72

van der Waals interaction

very weak interaction between molecules due to temporary charges attracting atoms that are very close together

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73

alpha-helix structure (α-helix)

type of secondary structure of proteins formed by folding of the polypeptide into a helix shape with hydrogen bonds stabilizing the structure

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74

amino acid

monomer of a protein; has a central carbon or alpha carbon to which an amino group, a carboxyl group, a hydrogen, and an R group or side chain is attached; the R group is different for all 20 amino acids

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beta-pleated sheet (β-pleated)

secondary structure found in proteins in which "pleats" are formed by hydrogen bonding between atoms on the backbone of the polypeptide chain

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76

biological macromolecule

large molecule necessary for life that is built from smaller organic molecules

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carbohydrate

biological macromolecule in which the ratio of carbon to hydrogen and to oxygen is 1:2:1; serve as energy sources and structural support in cells and form the a cellular exoskeleton of arthropods

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cellulose

a polysaccharide that makes up the cell walls of plants and provides structural support to the cell

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79

chaperone (also, chaperonin)

protein that helps nascent protein in the folding process

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80

chitin

type of carbohydrate that forms the outer skeleton of all arthropods that include crustaceans and insects; it also forms the cell walls of fungi

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81

dehydration synthesis (condensation)

reaction that links monomer molecules together, releasing a molecule of water for each bond formed

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82

denaturation

loss of shape in a protein as a result of changes in temperature, pH, or exposure to chemicals

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83

deoxyribonucleic acid (DNA)

double-helical molecule that carries the hereditary information of the cell

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84

disaccharide

two sugar monomers that are linked together by a glycosidic bond

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85

enzyme

catalyst in a biochemical reaction that is usually a complex or conjugated protein

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86

glycogen

storage carbohydrate in animals

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87

glycosidic bond

bond formed by a dehydration reaction between two monosaccharides with the elimination of a water molecule

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88

hormone

a chemical signaling molecule, usually a protein or steroid, secreted by an endocrine gland or group of endocrine cells; acts to control or regulate specific physiological processes

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89

hydrolysis

reaction that causes breakdown of larger molecules into smaller molecules by utilizing water

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90

lipid

macromolecule that is nonpolar and insoluble in water

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91

Messenger RNA (mRNA)

RNA that carries information from DNA to ribosomes during protein synthesis

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92

monomer

smallest unit of larger molecules called polymers

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monosaccharide

a single unit or monomer of carbohydrates

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nucleic acid

biological macromolecule that carries the genetic blueprint of a cell and carries instructions for the functioning of the cell

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95

nucleotide

monomer of nucleic acids; contains a pentose sugar, one or more phosphate groups, and a nitrogenous base

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96

omega fat

type of polyunsaturated fat that is required by the body; the numbering of the carbon omega starts from the methyl end or the end that is farthest from the carboxylic end

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97

peptide bond

bond formed between two amino acids by a dehydration reaction

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98

phosphodiester linkage

covalent chemical bond that holds together the polynucleotide chains with a phosphate group linking neighboring nucleotides' two pentose sugars

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99

phospholipid

major constituent of the membranes; composed of two fatty acids and a phosphate-containing group attached to a glycerol backbone

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polymer

chain of monomer residues that is linked by covalent bonds; _______ization is the process of _______ formation from monomers by condensation

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