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Vocabulary flashcards for key terms in DNA structure and replication.
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Carbon Numbering in DNA
The carbons in the sugar of DNA are numbered from 1 to 5, always moving clockwise from the Oxygen on the Deoxyribose.
Purines
A and G; Have a double-ring structure.
Pyrimidines
C and T; Have a single-ring structure.
X-ray diffraction 'X' pattern
Indicates that X-rays passing through a molecule diffract at angles perpendicular to the helix, suggesting an equal diameter helix in DNA.
Length of one turn of the DNA helix
34 Angstroms
Distance between base pairs in DNA
3.4 Angstroms
Width of the DNA helix
20 Angstroms
Three parts of a nucleotide
DNA and RNA Pentose Sugar, Phosphate, Nitrogen base
Antiparallel
Two polynucleotide chains run in opposite directions.
Semiconservative Replication
Each new DNA double helix conserves half of the original, parental double helix.
Conservative Model (DNA replication)
The parental double helix remains intact, and a second, all-new copy is made.
Semiconservative Model (DNA replication)
The two strands of the parental molecule separate, and each functions as a template for synthesis of a new complementary strand.
Dispersive Model (DNA replication)
Each strand of both daughter molecules contains a mixture of old and newly synthesized parts.
Replication Fork
A site where DNA is locally opened.
Helicase
Catalyzes the untwisting of the DNA at the replication fork.
Binding Proteins
Stabilizes separate strands of DNA
Primase
Adds short primer to template strand.
DNA Polymerase
Binds nucleotides to form new strands.
Ligase
Joins Okazaki fragments and seals other nicks in the sugar-phosphate backbone.
Topoisomerase
Breaks the DNA strands and prevents excessive coiling.
Primase
Synthesizes the RNA primers and starts the replication.
DNA Polymerase
Adds DNA nucleotides to the RNA primer at the 3’ end; also has proofreading activity.
Leading Strand
Strand synthesized continuously in a 5’ to 3’ direction.
Lagging Strand
Synthesis produces Okazaki fragments on the 5’ to 3’ template.
DNA synthesis
DNA synthesis proceeds in both directions from a point of origin.
Helicase
Separates DNA strand
Primase
Creates RNA primers
Single Stranded Binding Protein
Prevents reannealing
DNA Polymerase
Extends DNA strand