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Lecture 2
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2 divisions of metabolic pathway
catabolic
anabolic
catabolic pathways
larger molecule broken down into smaller units to generate energy
anabolic pathways
complex biomolecules are synthesised from simpler, smaller units
consume energy
Catabolic pathways required to completely oxidise glucose and release energy as ATP
Glycolysis
Citric acid cycle
Oxidative phosphorylation
Insulin independent tissues and the transporters used
brain, liver, erythrocytes
insulin independent transporters, like GluT1, GluT2, GluT3
Glycolysis short overview
Glucose/glycogen metabolised to pyruvate and 2 ATP
NAD reduce to NADH
2 fates of NADH
transported into mitochondria for oxidation
used to reduce pyruvate to lactate (regenerating NAD)
When is glycolysis used to generate energy?
absence of oxygen
lacking mitochondria (e.g. erythrocytes, cells within the retina)
burst of activity in fast-twitch (white) muscle
How is the ‘oxygen debt’ repaid?
increasing citric acid cycle rate to oxidise the lactate produced in the body
2 halves of glycolysis
chemical priming/energy consuming phase- up to glyceraldehyde 3-phosphate
energy-generating stages
1st reaction in glycolysis
Glucose + ATP ——> glucose-6-phosphate + ADP + H+
catalyst: hexokinase in muscle/glucokinase in liver
Type of reaction: Phosphorylation, reversible
*NB - ATP must form a complex with Mg2+, otherwise it acts as an inhibitor of hexokinase. 1st ATP has been used.
2nd reaction in glycolysis
Glucose-6-phosphate —→ fructose-6-phosphate
catalyst: phosphoglucose isomerase
Type of reaction: isomerisation, reversible
3rd reaction in glycolysis
Fructose-6-phosphate + ATP —→ Fructose-1,6-bisphosphate + ADP + H+
Catalyst: Phosphofructokinase
Type of reaction: phosphorylation, irreversible
*NB - ATP forms complex with Mg2+ again to prevent inhibition of PFK. 2nd ATP has been used.
4th reaction in glycolysis
Fructose-1,6-bisphosphate —→ Dihydroxyacetone phosphate + glyceraldehyde-3-phosphate
Catalyst: aldolase
Type of reaction: Cleavage, reversible
5th reaction of glycolysis
Dihydroxyacetone phosphate —→ enediol intermediate —→ glyceraldehyde-3-phosphate
Catalyst: Triose phosphate isomerase
Type of reaction: isomerisation, reversible
*NB - final step in stage 1 of glycolysis
6th reaction in glycolysis
Glyceraldehyde-3-phosphate + NAD+ + Pi —→ 1,3-Bisphosphoglycerate + NADH + H+
Catalyst: glyceraldehyde-3-phosphate dehydrogenase
Type of reaction: oxidation & phosphorylation, reversible
*NB - 1,3-BPG is first high-energy intermediate
7th reaction in glycolysis
1,3-Bisphosphoglycerate + ADP —→ 3-Phosphoglycerate + ATP
Catalyst: phosphoglycerate kinase
Type of reaction: Phosphorylation, reversible
*NB - 1st ATP is generated
8th reaction in glycolysis
3-Phosphoglycerate —→ 2-Phosphoglycerate
Catalyst: phosphoglycerate mutase
type of reaction: functional group movement, reversible
9th reaction in glycolysis
2-Phosphoglycerate —→ Phosphoenolpyruvate + water
catalyst: enolase
type of reaction: dehydration, reversible
*NB - 2nd high energy intermediate is formed
10th reaction in glycolysis
Phosphoenolpyruvate + ADP + H+ —→ Pyruvate + ATP
Catalyst: pyruvate kinase
Type of reaction: cleavage, phosphorylation, irreversible
*NB - 2nd ATP is generated. Last stage.
What is net reaction for glycolysis?
Glucose + 2Pi + 2ADP + 2NAD+ —→ 2 Pyruvate + 2ATP + 2NADH + 2H+ + 2H2O
2 methods of NAD regeneration
NADH oxidised in mitochondria
NADH oxidised by lactate dehydrogenase during anaerobic glycolysis (pyruvate —→ lactate)
Production of lactate
Pyruvate + NADH —→ Lactate + NAD
Fate of lactate
Exported to liver or converted back to pyruvate for oxidation of NADH and pyruvate in mitochondria once oxygen concentrations increase
What type of glycolysis does fast twitch (white muscle) use?
anaerobic glycolysis
how is the oxygen debt repaid?
increasing citric acid cycle rate to oxidise the lactate
Pentose Phosphate Pathway
catabolic pathway
operates alongside glycolysis in the fed state
ensure supply of NADPH and other intermediates like ribose-6-phosphate.
opeartes in cell types heavily incolved in biosynthesis of fats and other biomolecules, e.g. mammary glands, adipose tissue, adrenal cortex, the liver
The mechanism of glucose synthesis from pyruvate (1st stage).
pyruvate + CO2 —→ oxaloacetate
catalyst: pyruvate carboxylase
*NB - energy used from ATP
The mechanism of glucose synthesis from pyruvate (2nd stage).
oxaloacetate + (phosphate) —→ phosphoenolpyruvate + CO2
catalyst: PEP carboxykinase
*NB - uses energy and phosphate from GTP hydrolysis. PEP leaves the cycle and becomes glucose through gluconeogenesis.
carbohydrate metabolism in the liver
major role in glucose homeostasis
maintains blood glucose concentration for brain and red blood cells
in fed state: converts glucose to glycogen and triacylglycerides
in fasting state: moblises glycogenolysis & gluconeogenesis.
carbohydrate metabolism in muscle
uses glucose
white (type II fast twitch muscle) - uses glucose in anaerobic respiration
red (type I slow twitch muscle) - uses glucose in aerobic respiration
glucose from blood supply or glycogen stores.
fate of pyruvate
ethanol (fermentation in yeast)
lactate
acetyl-CoA —→ citric acid cycle
glucose
dysregulation of glycolysis in ischaemia
lack of oxygen as reduced blood flow leads to anaerobic glycolysis
results in lactic acid build up, therefore lactic acidosis
where does gluconeogenesis take place?
primary location: liver
secondary location: kidneys
stages of gluconeogenesis different to glycolysis
most stages of glycolysis can proceed in reverse
BUT
once fructose-1,6-bisphosphate is reached, different enzymes used.
fructose-1,6-bisphosphate —→ fructose-6-phosphate
catalyst: fructose bisphosphatase
type of reaction: dephosphorylation, hydrolysis
glucose-6-phosphate —→ glucose
catalyst: glucose-6-phosphatase
type of reaction: hydrolysis, dephosphorylation