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Lab safety, Lab overview, Module 1, and Module 2 (except exercise 2-5)
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What goes in the Biohazard bin?
1) live cultures on agar plates
2) Pipet tips
3) Serological pipettes
4) Gloves
5) Dropper (not the wrappers
6) Swabs (not the wrappers)
7) microcentrifuge tupes
What should be disposed in trash?
1) paper towels used for wiping benches
2) Gauze
3) wrappers from swabs, droppers, and serological pipettes
Compound brightfield microscope
Examines morphology (shape) of live microbial cells, or “fixed” specimen
Brightfield microscope
Specimen look dark against bright (white) background
Since bacterial cells are transparent→ often have to stain cells before microscopy
Darkfield/ phase contrast microscope
do not have to stain
better contrast → species appear bright against dark background
Examines cell morphology as well as motility in native state
Bacteria that is difficult to stain is examined using?
Darkfield or phase contrast microscope
Which microscope has the ability to provide most detailed image of species?
Phase contrast
Can observe certain intracellular structures and inclusions
How does light reflect in brightfield vs darkfield?
Brightfield: Light passes through specimen, making cells appear darker
Darkfield: Special condenser ensures only light that is reflected off the specimen will enter objective
What special component does the phase contrast microscope have that brightfield and darkfield do not?
1) annular diaphragm- light transmitted is directed into cone shape
2) Phase-shifting element- shifts waves of refracted light
what does the compound microscope have as it’s component?
1) objective lens- first magnified by this lens (4x, 10x, 40x, 100x)
2) ocular lens- Further magnified 10x
Resolving power
Ability of the microscope to distinguish two objects (or points) positioned closely as two separate objects
determined by wavelength of light used and the numerical aperture
Resolving power equation
wavelength of light used/ 2(numerical aperture of the objective)
Why must immersion oil be added?
Increase the amount of light going into the objective lens and obtain a clear image
would be blurry otherwise
parfocality
Specimen remain in focus while switching from one objective to another
Brownian motion (not true motile)
When bacteria appear to just be vibrating in the same place instead of moving around
result of random collisions of partle/cells
Current flow (not true motile)
Simultaneous movement, in one direction
commonly observed when the slides are starting to dry out
Why do bacteria have a strong affinity for basic dyes?
Because their cell surfaces have an overall negative charge
Examples of basic dyes
1) Methylene blue
2) Crystal violet
3) Safranin
4) Malachite green
What are acidic dyes commonly used for
background staining
stain everything but the cells
Simple stain
One basic dye is applied to the specimen and all cells are colored in a nonspecific way
Differential stain
Successfully stain structural and cellular components of bacterial cells
used to classify cell-wall composition, capsules, endospores, and flagella
Acid fast staining resisting gram-staining?
Due to the presence of a waxy layer on the surface of their cells
are gram-positive
Harsher staining method→ retains dye during the treatment
Capsules and slime layers
Made up of polysaccharides
Makes it easier to attach to surfaces and form biofilm
Having capsules increase the pathogensis
Sporulation process
Results in the formation of specialized structures called endospores
metabolically inactive and extremely resistant structures
A vegatative cell can produce _______
one endospore