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Define colonisation
when an organism lies on us but is not causing infection
Define infection
when an organism enters the body, increases in number and damages the host in the process
(invasion, replication, damage)
Define A pathogen
someone who eats with you’ – an organism which lives on us / in our gut but doesn’t cause
infection
Define A commensal
someone who eats with you’ – an organism which lives on us / in our gut but doesn’t cause infection
Define Symbiosis
mutual benefit
Define parasite
unequal benefit, used colloquially for eukaryotic infections (malaria, tape worms) but
technically applies to infection causing bacteria too
Define Virulence
fundamental properties of the organism which determine how it causes the diseases it does.
Define True or “professional” pathogens
True or “professional” pathogens – cause disease in any susceptible host
Define “Opportunistic” pathogens
“Opportunistic” pathogens – only cause disease in immunocompromised patients
Staphylococcus aureus
A normal commensal of anterior nares found in 20-60% of healthy adults at any one time
Highly adapted
To a host species - to Homo sapiens
To a site on our bodies - nose
Golden colonies when cultured on agar
Gram positive cocci in clusters which look like bunches of grapes down a microscope
S. aureus virulence
surface proteins which mainly function as adhesion molecules
A group of secreted proteins
A capsule around the organism and
A cell wall associated enzyme called Coagulase
A quorum sensing regulatory system that controls gene expression

S. aureus: cell wall-associated adhesins
Adhesins: bind host proteins:
Tissue adherence -> colonisation or deep infections
Immune evasion ->‘cloaking’e.g Protein A
Protein A
Binds the Fc portion of IgG
Amongst surface factors two of the most important are the adhesins.
Some bind host proteins like elastin and allow attachment; but they also can coat the bacterium in host proteins so that the immune system doesn’t notice them
A very specific version of this is protein A which binds immunoglobulin -
S. aureus: secreted protein exotoxins
Cytotoxins
Pore-forming toxins, lyse host cells
Eg Panton-valentine leukocidin (PVL) – lyses polymorphs
Exfoliative toxins
Proteases which target epidermal structural proteins
Enterotoxins
Superantigens
Stimulate massive T cell activation ?immune evasion
and more... complement inhibitors
Many of these are encoded on mobile genetic elements – only present on a proportion of strains
S. aureus coagulase
Cell wall-bound enzyme
Stimulates clotting
Plays a role in immune evasion
Also used as a test to distinguish S. aureus from other less virulent staphylococci in the laboratory
S. aureus capsule
Like many virulent bacterial species S. aureus has a polysaccharide capsule
Masks cell surface features from recognition by the immune system
Compared with other bacterial species the S. aureus capsule is typically thin - ”microcapsule” but helps avoid phagocytosis by neutrophils
Gene regulation
Some genes are constitutively expressed as essential for cell survival.
Some allow for cell replication and growth when conditions are favourable.
Others, the virulence factors, are expressed to establish infection.
S aureus can survive and adapt to different conditions by sensing environmental cues and altering the production of virulence factors needed to survive.
Bacterial quorum sensing
Gram positive bacteria produce auto-inducing peptides (AIPs).
The concentration of intra- and extra-cellular AIP reflects the local concentration of bacteria.
Bacterial quorum-sensing
Detection of AIP occurs via a 2-component signal transduction circuit, activating a response regulator protein.
This then binds to promoter DNA and regulates transcription of QS-regulated genes
The gene cluster that encodes the peptide quorum-sensing system in S. aureus is called the accessory gene regulator (agr)
Is S. aureus or S. epidermidis more severe?
S. aureus is a common cause of infections in patients who need vascular access devices for e.g. cancer treatment
S. aureus line infections commonly ‘seed’ in the blood to distant body sites
Heart valves
Bones and joint
This is because of S. aureus adhesins
S. epidermidis is actually a more common cause of line infections. However, these are much less severe and rarely seed in the blood
S. aureus can cause food poisoning - true or false
True
Ingestion of Staphylococcal enterotoxins in contaminated food:
”entero”= gut
Rapid brief illness
Vomiting +++
Minimal diarrhoea
Secondary ‘metastatic’ foci of infection
Endocarditis
Osteomyelitis
Septic arthritis
Almost anywhere else
Features of gram positive
Thick peptidoglycan layer
Lipoteichoic and teichoic acid
Gram negative bacteria features
Gram negative
Outer membrane
Lipopolysaccharide
Proteins and pores
Thin peptidoglycans
Inner membrane
LPS review
Lipopolysaccharide (a.k.a. endotoxin): only in Gram negatives
Lipid A = long-chain fatty acid anchor (active component)
Core polysaccharide chain
Variable CHO chain (= O antigen)
Major structural component
Effective permeability barrier (including to antimicrobials)
Modulates host immune response
Innate immune system is very sensitive to Lipopolysaccharide
Human evolution has (probably) selected for sensitive detection of Gram negative bacteria which predominate in bites, contaminated wounds etc.
This allows very early recognition of infection
LPS interacts with “Toll-Like Receptors” (esp. TLR4) on
Monocyte / macrophage lineage cells
Vascular endothelium
Results in activation of:
Inflammatory pathways
Coagulation and clotting pathways
Changes in endothelial integrity - make blood vessels leaky
“cross the bloodbrain barrier by disrupting tight junctions between endothelial cells, enter the subarachnoid space and establish meningitis”
Primary adhesion is mediated by meningococcal type IV pilus to laminin receptors on brain endothelial cells.
Cortical plaques protect bacteria from complement mediated opsonisation and lysis.
They also disrupt tight junctions between endothelial cells and so allows paracellular spread into CSF
However, has ability to invade the bloodstream and cause septicaemia; or cross the bloodbrain barrier by disrupting tight junctions between endothelial cells, enter the subarachnoid space and establish meningitis.

Secretory IgA protease function
Breaks down secreted immunoglobulin A, preventing mucosal clearance
Pneumococcal surface protein A (PspA) function
Inhibits complement deposition and hence activation of cascade and clearance of bacteria; also neutralises lactoferrin’s bactericidal activity
Capsule function
Polysaccharide coat prevents complement-mediated phagocytosis.
Specific antibodies to capsule required (implications for immunisation)
>100 different capsular types