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Biochemistry Y1S2
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What is the beta oxidation pathway?
The process by which fatty acids are broken down to release energy
Which carbon is the beta carbon?
The second carbon atom adjacent to the carboxyl group in a fatty acid (third including the carboxyl group)
How are fatty acids broken down?
by removal of two-carbon groups
Which bond is broken?
The bond between the alpha and beta carbons is broken during beta oxidation.
What are the products?
benzoate and a 2 carbon unit
Activation step
formation of acyl-CoA from fatty acid acyl groups (by using ATP and CoA).
RCOO- + CoA + ATP → acyl-CoA + AMP + PPi
Transport step
involves the transport of fatty acids into the mitochondria via the carnitine shuttle
Acyl CoA + carnitine → Acyl carnitine + HS-CoA
(catalysed by carnitine acyltransferase I)
Where does the acyl group attach on carnitine?
in place of hydroxyl, releasing CoA
Step 1 of oxidation stage
Dehydrogenation
Palmitoyl-CoA → trans-delta2-enoyl-CoA
Produces FADH2 and catalysed by acyl-CoA dehydrogenase.
Step 2 of oxidation stage
Hydration
trans-delta2-enoyl-CoA → L-beta-hydroxyacyl-CoA
Involves the addition of water, catalysed by enoyl-CoA hydratase
Step 3 of oxidation stage
Dehydrogenation
L-beta-hydroxyacyl-CoA → beta-ketoacyl-CoA
Produces NADH and is catalysed by beta-hydroxyacyl-CoA dehydrogenase.
Step 4 of oxidation stage
Thiolytic cleavage
beta-ketoacyl-CoA → acyl-CoA + acetyl-CoA
Involves the addition of CoA-SH and is catalysed by acyl-CoA acetyltransferase (thiolase).
Overall reaction for beta oxidation
Cn-acyl-CoA + FAD + NAD+ + H2O + CoA → acetyl-CoA + FADH2 + NADH + H+ + Cn-2-acyl-CoA
Overall reaction for TCA cycle
Acetyl-CoA + 3NAD+ + FAD + GDP + Pi +2H2O → 2CO2 + 3NADH + FADH2 + GTP + CoA + 3H+
1st step of ketone body formation
2 acetyl-CoA → acetoacetyl-CoA, catalysed by thiolase
2nd step of ketone body formation
acetoacetyl-CoA + acetyl-CoA → HMG-CoA, catalysed by HMG-CoA synthase
HMG-CoA is an important intermediate eg in production of cholesterol. Too much of it can lead to overproduction of cholesterol
3rd step of ketone body formation
HMG-CoA → acetoacetate (1st component of ketone bodies produced) + acetyl-CoA, catalysed by HMG-CoA lyase.
4th step of ketone body formation
acetoacetate → D-beta-hydroxybutyrate, catalysed by D-beta-hydroxybutyrate dehydrogenase. Uses NADH, converts to NAD+
Utilisation of ketone bodies - what happens once inside cells?
D-beta-hydroxybutyrate → acetoacetate
NAD+ → NADH + H+
catalysed by D-beta-hydroxybutyrate dehydrogenase.
2nd step of ketone body utilisation
acetoacetate → acetoacetyl-CoA
requires CoA in the form of succinyl-CoA (succinate is a product)
catalysed by beta-ketoacyl-CoA transferase
final step of ketone body utilisation
acetoacetyl-CoA → 2 acetyl-CoA
requires CoA in the form of CoA-SH
catalysed by thiolase.
acetyl-CoA can then enter the TCA cycle which is not limited by the amount of oxaloacetate.
What organs or tissues prefer to use ketone bodies such as acetoacetate as a sourceof fuel instead of glucose?
heart and renal cortex
Which of the following is not a ketone body:
acetoacetate
beta-hydroxybutyrate
acetone
acetaldehyde
acetaldehyde
Theoretically what is the net gain in ATP from complete oxidation of palmitate?
129 ATP
Overall equation for fatty acid oxidation (1 cycle)
Cn-acyl CoA + FAD + NAD+ + H2O + CoA → Cn-2-acyl CoA + FADH2 + NADH + acetyl CoA + H+
How many ATP does oxidation of acetyl CoA by the citric acid cycle produce?
10