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Nominal Mass
Integer mass of the species with the most abundant isotope of each of the constituent atoms.
Electron Ionization
Method used to create ions of gaseous molecules in the inlet of a mass spectrometer by bombardment of the gas with high-energy electrons.
Where do electrons travel in EI?
From filament to positively charged metallic conductor
How is a lower energy state achieved EI
Electrons interact with gaseous molecules to create cations via raising energy. Done to the point where the molecule will expel an electron to achieve a lower energy state.
molecular ion
cation with the same elemental composition as the original molecule
Base peak
most intense peak in a mass spectrum, intensity of 100.
Chemical Ionization
a gentle method of producing ions for a mass spectrometer without extensive fragmentation of the analyte molecule, M
Types of molecules in CI and EI
Volatile organics, gases, nonpolar compounds
What type of Ionization if EI?
Hard ionization
What type of Ionization is every other ionization technique in this course?
Soft ionization
Molecules in ESI
Polar compounds from small molecules to large biopolymers
Characteristics of ESI
high ionization efficiency; large ion charge; compatible with liquid chromatography
Characteristics of EI
structural information; possibly weak molecular ion; compatible with gas chromatography
Characteristics of CI
strong molecular ion; compatible with gas chromatography
Molecules in APCI and APPI
Nonpolar and less polar small molecules
Characteristics of APCI and APPI
strong molecular ion peak; compatible with chromatography
Molecules of MALDI
Polar compounds from small molecules to large biopolymers
Characteristics of MALDI
easy to perform; low ion charge; suitable for high throughput; high ionization efficiencies
Electrospray Ionization
an ionization method for mass spectrometry in which cations or anions in solution are transferred to the gas phase by formation and desolvation of an aerosol spray created by an electric potential
Mobile phase in chromatography
Phase where solvent flows, typically liquid or gas
Stationary Phase
Viscous stuff, stays in place
Elution
Liquid/Gas passing through chromotography column
Eluent
Fluid entering column
Eluate
Fluid emerging from column
Packed Column
Filled w/ stationary phase particles
Open tubular column
Narrow, hollow capillary w/ stationary phase coated on inside walls
Adsorption Chromatography
Stationary Phase: Solid
Mobile Phase: Liquid/Gas
Solute is adsorbed onto surface of solid particles, stronger solute=slower travel time
Partition Chromatography
Stationary Phase: Liquid bonded to solid support
Mobile: Liquid/Gas
Solute partitions between stationary liquid and mobile phase
Ion-Exchange Chromatography
Stationary Phase: Anions and Cations (SO3-, N(CH3)+
Mobile Phase: Liquid w/ Eluent Ions
Solute ions of opposite charge are attached to stationary phase.
Size Exclusion Chromatography
Stationary: Porous Gel
Mobile: Liquid/Gas
Separates particles based on size, larger solutes pass quickly. Pore only small enough to exclude large solute, not small ones. Smaller molecules take longer as they enter gel and are shielded from mobile phase.
Affinity Chromatography
Stationary Phase: Covalently bound molecule that binds w/ high specificity
Mobile Phase: Liquid
Analyte is eluted via changing pH or Ionic Strength
Baseline Resolution
Occurs in Chromatography when two adjacent peaks are sufficiently resolved that signal between peaks returns to baseline.
What is the ideal baseline resolution?
1.5
Gas chromatography
Form of chromatography in which the mobile phase is a gas, with the mobile phase being a carrier gas.
Open-tubular columns
A hollow capillary column whose inside walls are coated with stationary phase. Coiled to fit within a compact temperature-controlled oven.
Wall-coated open tubular (WCOT) column
Hollow chromatographic column in which the stationary phase is coated on the inside surface of the wall. Most common type of gas chromatography column.
Porous-layer open tubular (PLOT) column
Column containing an adsorptive solid phase coated on the inside of its wall.
Most common carrier gases in GC
Helium, H2 (both give better resolution), Nitrogen
Guard Column
A 3- to 10-m length of empty capillary. Silanized so that solutes are not retained by the bare silica wall. Placed in front of the capillary chromatography column to trap nonvolatile contaminants. Accumulates nonvolatile substances that would otherwise contaminate the chromatography column and degrade performance.
Common Gas Chromatography Detectors
•Thermal conductivity
•Flame ionization
•Electron capture
•Mass spectrometer
Universal Detector
Responds to all analytes, but not to carrier gas
What are two universal detectors?
•Flame ionization and thermal conductivity
Selective Detector and Example
Responds to limited class of analytes. Example: Electron capture
Thermal conductivity
Measures the ability of a substance to transport heat from a hot region to a cold region.
Characteristics of Thermal Conductivity Measuring
•Useful for packed columns and capillary porous layer columns
•Less sensitive than other detectors for open tubular columns
•Does not alter the sample
Requirements and carrier gas used in Thermal Conductivity
•For thermal conductivity detection, carrier gas must have a very different thermal conductivity than the analytes.
•Helium is most common used.
•Any analyte mixed with He lowers the conductivity of the gas stream.
Thermal Conductivity—Principal of Operation
•Eluate from the column flows over a hot tungsten-rhenium filament.
•Pure carrier gas flowing over the filament establishes a baseline temperature of the filament.
•When analyte emerges:
•Thermal conductivity of the gas stream decreases
•Causes the filament to get hotter è an increase in electrical resistance è a change in voltage across the filament
•The detector measures the change in voltage.
Flame ioniziation
Gas chromatography detector in which solute is burned in an H2-air flame to produce CHO+ ions. The current carried through the flame by these ions is proportional to the concentration of susceptible species in the eluate.
Principal of Operation for Flame Ionization
•Eluate from the column is burned in a mixture of H2 and air.
•Analyte containing carbon atoms (except carbonyl and carboxyl carbons) produces CH radicals, which produce CHO+ ions and electrons in the flame.
CH + O → CHO+ + e−
•Only approximately 1 in 106 C atoms produce an ion.
•Ion production is proportional to the number of susceptible carbon atoms entering the flame.
•In the absence of analyte, a current of ~10−14 A flows between the flame tip and the collector.
•Analytes produce a current of ~10−12 A, which is converted to a voltage, amplified, filtered, and converted to a digital signal.
Electron capture detector
Gas chromatography detector that is particularly sensitive to compounds with halogen atoms, nitro groups, and other groups with high electron affinity. Most popular, useful for environmental samples.
Principals of Operation for Electron Capture Detection
•A makeup gas of very-high-purity N2 or 5-10% CH4 in Ar is added to He or H2 carrier gas.
•Gas entering the detector is ionized by high-energy electrons (β− particles) emitted from a foil containing radioactive 63Ni.
•Electrons in the plasma thus formed are attracted to an anode, producing a small current that is maintained at a constant level by variable frequency pulses between the cathode and anode.
•When analytes with a high electron affinity enter the detector, they capture some electrons and decrease the conductivity of the plasma.
•The detector responds by varying the frequency of voltage pulses to maintain a constant current. The frequency of the pulses is the detector signal.
Advantages of Split Injection
•Best for high concentrations of analyte or gas analysis.
•Offers high resolution and can handle dirty samples if glass wool is added to the injection liner.
Advantages of Splitless Injection
•Required for very dilute solutions.
•Solvent trapping or cold trapping is required, and temperature programming is necessary.
Advantages of On-column injection
•Best for thermally sensitive compounds and for the most accurate quantitative analysis.
•Limited to clean samples containing little or no nonvolatile components.
It can handle dilute or concentrated solutions and relatively large or small volumes
Nitrogen-Phosphorus Detector
Modified flame ionization detector that is especially sensitive to compounds containing N and P.
Photoionization detector
Uses a vacuum ultraviolet source to ionize aromatic and unsaturated compounds.
•It has little response to saturated hydrocarbons or halocarbons.
•Electrons produced by the ionization are collected and measured.
Stir-bar sorptive extraction
sample preparation method similar to solid-phase microextraction, except the sorptive layer is coated on the outside of a stirring bar. Analyte is removed from the coating by thermal desorption for chromatography.
Thermal desorption
Method for releasing volatile compounds from solid samples
Principal of Operation for Thermal Desorption
•A weighed sample is placed in a steel or glass tube and held in place with glass wool. The sample is purged with carrier gas to remove O2, which is vented into the air, not the chromatography column.
•The desorption tube is then connected to the chromatography column and heated to release volatile substances, which are collected by cold trapping at the beginning of the column. The column is heated to initiate chromatography.
Purge and trap
Method for removing volatile analytes from liquids or solids, concentrating the analytes, and introducing them into the gas chromatograph
Process of Purge and Trap
1.A carrier gas bubbled through a liquid or solid extracts volatile analytes.
2.These analytes are then trapped in a tube containing adsorbent.
3.After analyte has been collected, the adsorbent tube is heated and purged in the reverse direction to desorb the analytes, which are collected by cold trapping in a gas chromatography column.
High-performance liquid chromatography
Uses high pressure to force the solvent through closed columns containing fine particles that give high-resolution separations.
Why is GC preferred over HPLC?
•Is normally less expensive
•Yields greater separation efficiency
•Generates less waste
Most Common Mode of HPLC
Reversed-phase chromatography
Isocratic elution
Liquid chromatography using a constant solvent mixture for the mobile phase
Gradient elution
Chromatography in which the composition of the mobile phase is progressively changed to increase the eluent strength of the solvent