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What are the ketogenic amino acids?
Leucine and Lysine (only)
What amino acids are both ketogenic and glucogeni?
Phenylalanin, Tyrosine, Tryptophan, Threonine, Isoleucine
Where does NH3 come from in the Urea cycle?
glutamine
What organ is urea produced in?
liver
What is the source of the two amine groups in urea?
glutamic acid and aspartic acid
NAG synthase is upregulated by what?
Arginine
N-acetyl glutamate or NAG activates what enzyme?
Carbamoyl Phosphate Synthetase I (CPS-I)
Which CPS enzyme uses Glutamine?
CPS-II
Overall reaction of Urea Cycle
NH3 + CO2 + Aspartate → Urea + fumerate
hyperammonemia
Extensive ammonia accumulation leads to extensive liver damage and death. Liver cirrhosis caused by alcoholism creates an interference in the enzymes which produce carbamyl phosphate in the first step on the cycle.
hyperammonemia -1
defective CPS-I so
ammonia accumulates
hyperammonemia-2
defective ornithine transcarbomylase so
ammonia accumulates
Citrullinemia
defective Arginini succinate Synthase
Citrulline accumulates
Arginosuccinic aciduria
defective Argininosuccinate lyase
Arginosuccinate accumulates
Argininemia
defectice Arginase
arginine accumulates
NAG Synthase deficiency
CPS-I does not activate = no urea cycle = high nitrogen = low BUN
Ornithine Trnsporter Deficiency
Ornithine accumulates in the cytoplasm and is unable to enter the mitochondria
HHH syndrome
Hyper ornithinemia, Hyperammonemia, Homocitrillinuria = low BUN
HHH syndrome treatment
Intravenous administration of sodium benzoate, phenyllacetate which condence with glycine and glutamate to form easily secreted and water soluble products
low BUN levels
Liver dysfunction
high BUN levels
Kidney dysfunction
B1
Thaimine (TPP)
B2
riboflavin (FAD)
B3
Niacin (NAD)
B5
Pantothenic Acid (CoA)
B6
Pyridoxine Phosphate (PLP)
B7
Biotin
B9
Folate
B12
Cobalamin
DHFR inhibitor
Methotrexate (MTX)
Thymidylate Synthase inhibitor
5- Flourouracil (5-FU)
MTHFR inhibitor
DHF and SAM
MS (Methionine Synthase)/ Homocysteine methyl transferase cofactor
B12
Serine Hydroxymethylene transferase (SHMT) cofactor
Pyridoxal phosphate (B6)
Homocystinuria symptoms
Deep vain thrombosis (DVT)
Stroke
Atherosclerosis
Marfin-like habitus
Mental retardation
Joint contractures
Homocystinuria
disorder of methionine metabolism
very B6 high homocysteine
high methionine (somtimes)
decreased cysteine
Cystathionine β-synthase deficiency = (low cystathione b/c homocysteine → cystathionine is reduced)
B6 deficiency
B12 deficiency
folate (B9) deficiency
Homocystinuria
Marfanoid habitus + thrombosis
Homocystinuria
Megaloblastic anemia
macrocytic anemia caused by impaired DNA synthesis
B12 (cobalamin)/B9(folate) deficiency
No dUMP → dTMP
high homocysteine
high methylmalonic acid (b/c low B12)
Megaloblastic anemia
Megaloblastic anemia symptoms
megaloblasts (large immature RBC precursors)
anemia
B12 (cobalamin) decificncy
high homocysteine
high methylmalonic acid
B12 (cobalamin) decificncy symptoms
Megaloblastic amenia
nerve damage
painful and swollen tongue
pernicious anemia
B9 (Folate) deficiency symptoms
Spina bifada
anencephaly (neural tube defect)
macrocytic anemia
B9 (Folate) deficiency
high homocysteine
normal methylmalonic acid
Purine ring atom sources
Glycine
CO2
Asparate
Glutamine
10-Formyl THF
PRPP (ribose sugar synthesis) committed step
glutamine and water to 5'-phosphoribosylamine (PRA), glutamate, and pyrophosphate - catalyzed by amidophosphoribosyltransferase
amidophosphoribosyltransferase activator
PRPP
amidophosphoribosyltransferase inhibitor
AMP, GMP, IMP
IMP to AMP requires the addition and removal of what?
Aspartate in and fumerate out
IMP to GMP requires the addition and removal of what?
Glutamine in, Glutamate out
XMP is converted to what?
GMP
PRPP is the donor of what group?
5-phosphoribosyl group
Catabolized Purines are converted to what?
uric acid
HGPRT deficiency (Lesch-Nyhan syndrome)
•Spastic cerebral palsy
•Self-mutilation (hands, lips)
•Hyperuricemia
•Early death
Adenosine deaminase (ADA) deficiency
•Severe combined immunodeficiency
•Low T- and B-cells => infections
• Autosomal recessive
Purine Salvage Excretion pathway final product
Uric acid
Purine-nucleoside phosphorylase (PNP) role
separates the free purine base from the ribose (or deoxyribose)
Excessive Sodium urate results in
Gout (excess uric acid)
deficiency of hypoxanthine-guanine phosphoribosyltransferase or defective regulation of purine biosynthesis can result in?
Gout (excess uric acid)
Allopurinol is a treatment for
gout (lowers uric acid)
Allopurinol is an inhibitor for what enzyme?
xanthine oxidase
azathioprine
Purine Syntheiss inhibitor
immunosuppressant used in organ transplantation, autoimmune disease such as rheumatoid arthritis or inflammatory bowel disease such as Crohn's disease and ulcerative colitis.
Mycophenolate mofetil
inhibits purine synthesis by blocking inositol monophosphate dehydrogenase
Methotrexate
indirectly inhibits purine synthesis by blocking the metabolism of folic acid (inhibits dihydrofolate reductase)
Cholchicine
reduces inflammation, has no effect on uric acid production. Reduces macrophage ingestion of uric acid crystals.
Probenecid and sulfinpyrazone
increase uric acid excretion
Pyrimidine ring atom sources
Glutamine
Aspartate
HCO3-
Adenosine Deaminase is the enzyme used to convert what to what?
Adenosine → Insosine
Purine nucleoside phosphorylase (PNP) yields what two products?
Hypoxanthine and Guanine
In purine salvage pathway, what inhibits amidotransferase?
6-mercaptopurine
“Mercaptopurine murders purines” → inhibits: de novo purine synthesis
Role of amidotransferase?
Increases de novo purine synthesis
If Salvage pathway HGPRT (HPRT) if deficient or inhibited, you get?
Lesch-Nyhan syndrome
defective Glucose-6-phosphatase
Von Gierke disease
defective Lysosomal acid α-1,4-glucosidase
Pompe disease
defective Debranching enzyme
Cori disease
defective Branching enzyme
Anderson Disease
defective Muscle glycogen phosphorylase
McArdle disease
defective Liver glycogen phosphorylase
Hers disease
What process is Carbamoyl Phosphate II (CPS-II) a part of?
Pyrimidine Synthesis
Mitochondrial CPS I uses what as nitrogen source
NH3
Cytosolic CPS II uses what as the nitrogen donor to carbamoyl phosphate
glutamine
CPS-II activators
PRPP and IMP
Aspartate transcarbamoylase (ATCase)
Catalyzes the first committed pathway step for pyrimidine synthesis
In pyrimidine synthesis, if PRPP OR UMP synthase are defective what happens?
Orotic Aciduria = high orotic acid (only)
If Ornithine transcarboxylase (OTC deficiency) in Urea cycle is inhibited, what happens?
high orotic acid = orotic aciduria
high carbamoyl phosphate in mitochondria
defective or inhibited Ribonucleotide reductase (UDP → dUDP + CT))
hydroxyurea
Trimethoprim inhibits?
DHFR
Pyrimethamine inhibits?
DHFR
Inhibited Phenylalanine Hydroxylase or low tetrahydropteridin
Phenylketonuria (PKU) = high Phenylketones
•Mental retardation
•Musty odor in urine
•Microcephaly
•Avoid aspartame
•Diet low in Phe
Phenylketonuria, PKU
defective or inhibited Tyrosinase = low Melanogenesis
Albinism
•Dark urine
•Ochronosis
•Arthritis
urine turns black or dark on standing
bluish-black connective tissue pigmentation (bluish/blackish tips of ear)
Alkaptonuria
homogentisate oxidase deficiency = high homogentisic acid
Alkaptonuria
brankched chain ketoacid dehydrogenase
Maple Syrup Urine Disease
•Urine has odor of maple syrup
•Color is caramel
•Abnormal muscle tone
•Mental retardation
•Ketosis
•Coma, Death
Maple Syrup Urine Disease
No or low B12
defective Methylmalonyl-CoA mutase
high Methylmalonate
Methylmalonic aciduria
Low/No Biotin
Propionyl-CoA Carboxylase is defective
high propionyl-CoA
Homocystinuria = high homocysteine
defective Homocysteine methyl transferase
Homocystinuria = high homocysteine
defective Cystathionine synthase and little to no B6