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DNA can adopt several forms (A-form, B-form, Z-form). Which is not a major contributor to
such structural variation?
Changes in the ionization state of the backbone phosphates
DNA vs RNA backbone stability
DNA backbone is more stable (no -OH)
nucleotide is used in the Sanger method
ddCTP
rna có thể
có 2ndary structure, code for polypeptide chains, form double helices, have enzymatic activity
Which of the following DNA probes will form the most stable duplex with this DNA fragment
(which sequence is “complementary”)? 5’ GTTCGTAATGCT 3’
B. 5’ AGCATTACGAAC 3’
Polynucleotide covalent bonds are formed via ... which is a ... charged backbone?
Phosphodiester linkages, negatively
nucleic acids is
Polymers of nucleotides
nucleotides not used for?
D. Used in the monomer form for cellular functions
How many different puckered conformations can ribofuranose rings adopt in nucleotides?
4
In nucleotides, what determines the puckered conformation of ribofuranose rings?
Position of the C-2’ or C-3’ atom relative to C-5’
Why is a primer necessary in DNA replication?
To provide the 3’-hydroxyl group for nucleotide addition
What type of DNA damage is typical from exposure to UV light?
Cyclobutane dimers
A major component of RNA but not of DNA is:
Uracil
difference between a ribonucleotide and a deoxynucleotide
A deoxynucleotide has an -H instead of an -OH at C-2
phosphodiester bonds that link adjacent nucleotides in both RNA and DNA:
Join the 3' hydroxyl of one nucleotide to the 5’ phosphate of the next
In DNA sequencing by the Sanger (dideoxy) method:
The role of the dideoxy CTP is to occasionally terminate enzymatic synthesis of DNA
where Gs occur in the template strands.
nucleotide bases:
weakly basic, hydrophobic, insoluble at neutral ph, solubility increase in acid and alkaline, all of them absord uv light
functional groups of pyrimidines and purines
Ring nitrogens, carbonyl groups, exocyclic amino groups
Which groups are involved in hydrogen bonds in nucleotide bases?
carbonyl + amino group
nucleosides made up of
base + pentose
dna is
pyrimidines, purines are aromatic, vertical stacking, absorb uv light, a-t, g-c
backbones of both DNA and RNA
hydrophilic
Under alkaline conditions, dna and rna
rna hydrolyzed quickly
correct:
A. Hydrophilic backbone is stacked inside the double helix
B. Hydrophilic backbone is positively charged
C. Hydrophobic bases are on the outside of the double helix
D. Hydrophobic bases are stacked inside the double helix
Hydrophobic bases are stacked inside the double helix
dna is
purines restrict to
pyrimidines restricted to
semiconservative replication
none, both linh hoatj with anti and syn
anti
DNA is
Sugar pucker conformation: the A form has C-3’ endo, the B form has C-2’ endo
Some RNA segments are not complementary to each other → result in bulges or internal loops
Formation of pyrimidine dimers induced by UV light