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Pharmacology
defined as the study of substances that interact with living systems through chemical processes
Activation or inhibition
What can happen to normal biological processes as binding of a drug to a receptor occurs?
Beneficial effect on patient, toxic effect on infecting microorganism
two things that the goal of modifying a biological process may be done to achieve
Antihypertensives
example of medications with a beneficial effect on process within the patient
Antibiotics
example of medications with a toxic effect on process within the microorganism infecting the patient
Pharmacokinetics and pharmacodynamics
two major branches of pharmacology
Pharmacokinetics (PK)
absorption, distribution, metabolism, and excretion of drugs ("what the body does to the drug")
Absorption, distribution, metabolism, and excretion of drugs
What does pharmacokinetics involve?
Body, drug
Pharmacokinetics is the study of what the _______ does to the _______
Pharmacodynamics (PD)
Molecular, biochemical, and physiological effects of drugs ("what the drug does to the body")
Molecular, biochemical, and physiological effects of drugs
What does pharmacodynamics involve?
Drug, body
Pharmacodynamics is the study of what the _______ does to the _______
Toxicology and pharmacogenomics
two subcategories of pharmacology that include both PK and PD aspects
Toxicology
pertains to the undesirable effects of chemicals on living systems
Pharmacogenomics
pertains to the relationship between an individual's genetic makeup and drug response
Ligand
a substance that forms a complex with a biological molecule called a receptor
Endogenous or foreign molecules
two general types of molecules that can be ligands
Endogenous
molecules that can act as ligands and originate in the body (ex. hormones, neurotransmitters)
Foreign
molecules that can act as ligand and are taken in (ex. drugs)
Xenobiotics
another name for drugs, since they are foreign molecules acting as ligands
Receptor
a biological molecule that regulates some biological function upon binding to a ligand
Molecules that mimic biomolecules, other small organic molecules, inorganic molecules
different types of molecules that can serve as drugs
Lithium, iron
inorganic molecule examples
Regulatory proteins, transport proteins, enzymes, immune related proteins
4 primary types of molecules that serve as drug targets
Regulatory proteins
classical "receptors" such as cell surface, intracellular, and ion channels that most drugs bind to as a drug target
Structural
proteins that can also be drug targets, but less common
Cell surface receptors, intracellular receptors, ion channel receptors
types of regulatory proteins usually targeted by drugs and used as classical "receptors"
Receptors
proteins that translate an extracellular signal (a ligand) into an intracellular response
Appropriate size, charge, composition like functional groups, shape/spatial orientation (stereochemistry)
four things a drug molecule must have to interact chemically with its target
Covalent, electrostatic, hydrophobic
chemical forces/bonds that drugs use to interact with their targets
Ionic bonds, hydrogen bonds, Van der Waals forces
examples of electrostatic interactions of drugs and targets
Covalent
bonding of drugs to their targets that is relatively rare in comparison to non-covalent interactions
Non covalent
most common type of interactions between drugs and their targets
Imatinib
a BLC-Abl tyrosine kinase inhibitor, cancer drug
Activation of effector molecule
a key step that links receptor activation to a cellular response
Effector molecules
proteins that translate drug-receptor interaction into a change in cellular activity
Enzymes that produce another signaling molecule or ion channels
What are effector molecules usually?
Second messengers
another signaling molecule that an effector enzyme might produce; small molecules generated in large numbers to amplify a signal
Coupling molecules
intermediary molecules that connect drug-receptor binding to effector molecules
Receptor and effector activations
What does a coupling molecule connect?
G-proteins
classic examples of coupling molecules
Receptor and effector are same molecule, separate but connected molecules, or separate and require coupling molecule
example relationships between receptor and effector molecules
Ion channel
example where the receptor and the effector are the same molecule
JAK-STAT receptor
example where the receptor is a separate molecule from the effector, but the receptor directly activates the effector because they are in contact
GCPR
example where the receptor and effector are separate molecules, and they require a coupling molecule to carry the activation signal from the receptor to the effector
Action on receptor, permanence of receptor binding, influence on receptor confirmation, receptor binding site
4 basic characteristics used to categorize receptors
Agonist and antagonist
2 basic categories of ligands based on their action on a receptor
Agonist
a ligand that activates the receptor when bound and increases cellular response
Receptor activation
What do agonist ligands do when bound to a receptor?
Increased
What happens to cellular response when an agonist binds to a receptor?
Antagonist
a ligand that prevents receptor activation when bound and decreases cellular response
Prevent receptor activation
What do antagonist ligands do when bound to a receptor?
Decreased
What happens to cellular response when an antagonist binds to a receptor?
Almost always temporary and reversible
Is agonist binding usually temporary or permanent?
Temporary or permanent
Is antagonist binding usually temporary or permanent?
Receptor pool
a term sometimes used when referring to a group of receptors