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What does genome of fertilized egg determine
the ultimate structure of the clone of cells that will develop from it
What are tissues
organized mixtures of many cell types like the skin
What are totipotent cells
can become any cell in the body like a zygote including the extra-embryonic tissue like the placenta

What are pluripotent cells
Found in the inner cell mass of the blastocyst and can become any cell in the body except extra-embryonic tissues like placenta

What are multipotent cells
can develop into a limited range of cell types within a specific lineage

What are unipotent cells
can only differentiate into a single cell type but can still self-renew
What is differentiation
the process by which a cell becomes specialized for a particular function, like erythrocyte or red blood cell
What are stem cells
they are undifferentiated self-renewing cells that produce daughter cells that can either differentiate or retain the stem cell potential of the parental cell

What do stem cells give rise to
Proliferating precursor cells.
What does cell division before differentiation do
amplifies the number of differentiated cells that are produced
What are terminally differentiated cells
differentiated cells that are at the end of their developmental path
What is asymmetric cell division
a process that generates two daughter cells with different fates

What is symmetric cell division
a process that generates two daughter cells that are identical
What is intrinsic asymmetric cell division
the mother cell has an internal polarity causing it to divide unevenly and produce daughter cells that are already distinct at the time of division.
What is extrinsic asymmetric cell division
daughter cells are initially equivalent but develop different fates later due to signals from their environment or stochastically. The daughter cells interact with their surroundings or with each other to receive signals that induce different outcomes

What does intrinsic asymmetric cell division rely on
The asymmetric distribution of internal factors like proteins, organelles, and other molecules within the mother cell before division
Embryonic stem cells versus adult stem cells: potency levels
Embryonic: totipotent/pluripotent
Adult Stem: multipotent/unipotent
Embryonic stem cells versus adult stem cells: derived from what
Embryonic: inner cell mass of blastocyst
Adult Stem: rare population delivered from adult tissues
Embryonic stem cells versus adult stem cells: what do they differentiate into
Embryonic: cells of the three germ layers
Adult Stem: limited types terminally cells
Embryonic stem cells versus adult stem cells: used for what
Embryonic: development
Adult Stem: repair and maintenance
Do all types of tissues renew at the same rate
No, some tissues have constant turnover like the intestine or interfollicular epidermis, but other tissues like brain and skeletal muscle have low to no turnover

What do villi do
project into the intestinal lumen

What is the surface of each villus
a single-layered epithelium
What does epithelium include
goblet cells and brush-border cells
What do goblet cells do
secrete mucus
What do brush-border cells do
function in absorption
How are crypts formed
the epithelium extends into the underlying connective tissue
What is the crypt
a stem-cell niche which is a microenvironment required for continued stem cell renewal
What do stem cells give rise to in the lining of the small intestine
proliferating precursor cells
What happens to proliferating precursor cells in lining of small intestine
slide continuously upward and terminally differentiate into secretory or absorptive cells, which are shed from the tip of the villus

The speed at which the lining of small intestine renews
rapidly
What do stem cells in crypts do
divide to generate precursor cells which then divide and differentiate into specialized cells of the epithelium, which then travel upwards and are lost at top of the villus

What else do stem cells generate in addition to precursor cells
Paneth cells at the bottom of the crypts
Do paneth cells divide
no
What do paneth cells do
secrete antibacterial proteins and support stem cell renewal
What regulates intestinal crypt cells
Wnt signaling

Why must stem cells must be tightly regulated
to ensure that new cells are generated at the right place and at the right time
When is Wnt signaling active
in the intestinal stem cell niche (crypt)
When is Wnt signaling inactive
villi
Where is wnt ligand produced (Wnt3a)
Paneth cells
What does Wnt ligand promote
cell proliferation in the crypt

In the colon, what do mutations that inactive APC (adenomatous polyposis cell) initiate
initiate tumors by causing excessive activation of the Wnt signaling pathway.

What does dysregulated Wnt signaling do
disrupts intestinal morphology and function
What does increased Wnt signaling by APC removal in the crypt lead to
increased proliferation and expansion of the crypt compared to control animals

How is epidermis renewed
by stem cells in the basal layer

What is the epidermis
a stratified epithelium
Where do stem cells reside in adult mammalian skin
basal layer
Cell potency of epidermal stem cells
unipotent
What regulates epidermal stem cells
Wnt/b-catenin signaling
What stem cells generate all blood cell types
hematopoietic stem cells (HSCs)
Cell potency of HSCs
multipotent
Where do HSCs reside
in the bone marrow
What state are 80% of adult HSCs in and what can they do
quiescent state and can rapidly respond to a challenge
What are quiescent HScs
cells that have exited the cell cycle
What do adult HSCs undergo in response to acute inflammation
differentiation
What do stem cell niches in bone marrow provide
signals to reinforce quiescence of HSCs
What does Wnt signaling do to HScs niche
maintains it
Do stem cells function alone
No

What do bone marrow transplants depend on
HSCs
Types of transplants and what they mean
Autologous: donor and recipient are the same individual
Syngeneic: recipient receives cells from a twin
Allogeneic: recipient receives cells from a (nontwin) family member or other individual.
What happens in bone marrow transplant
patient’s stem cells are first destroyed by chemotherapy or radiation and then the grafted stem cells restore the functional bone marrow

cell potency of stem cells in brain
multipotent

What are neurons
cells in the brain that receive, integrate, and transmit signals
What is the process by which neurons are formed
neurogenesis
What are astrocytes
“star-like cells” with many functions, including removing excess signaling molecules, regulating synapse formation and maintenance
What are oligodendrocytes
Glial cells that produce myelin to insulate neuronal axons and help with neural signaling
What do microglia do
act as the first and main form of active immune defense in the central nervous system
Where do neural stem cells (NSCs) reside
in two regions of the adult brain: the subventricular zone (SVZ) and the dentate gyrus (part of the hippocampus)

What do NSCs in SVZ and dentate gyrus give rise to
neurons and other cell types in the brain
What do radial glia-like neural stem cells generate in NSC niche of SVZ
transit amplifying cells

What do C cells generate in NSC niche of SVZ
neuroblasts

What do neuroblasts do in NSC niche of SVZ
migrate down the rostral migratory stream to the olfactory bulb, where they differentiate into olfactory bulb neurons
What do astrocytes and microglia contribute to in NSC niche of SVZ
the cellular architecture of the niche

What do radial glia-like cells generate in the NSC niche of the dentate gyrus
intermediate progenitor cells (IPCs)

What do IPCs generate in the NSC niche of the dentate gyrus
neuroblasts

What do neuroblasts differentiate into in the NSC niche of the dentate gyrus
dentate granule cells

What do astrocytes, microglia, and interneurons contribute to in the NSC niche of the dentate gyrus
the cellular architecture of the niche

What molecular niche signals contribute to both adult NSC niches
morphogens (BMPs, SHH, Wnts, Notch), growth factors (EGF, IGF, EGF), and neurotransmitters (GABA, 5-HT, Ach, dopamine)
What are the three approaches to reprogramming in pluripotency
(1) somatic nuclear transfer or nuclear transfer, (2) cell fusion, (3) transcription-factor transduction
Whats somatic nuclear transfer or nuclear transfer
The nucleus of a somatic cell (which is diploid, 2n) is transplanted into an enucleated oocyte

Whats cell fusion
Two distinct cell types are combined to form a single entity.

Whats transcription-factor transduction and what does it form
Can be used to form induced pluripotent stem (iPS) cells, which have similar properties to ES cells and can be generated from almost any cell type in the body through the introduction of four genes (Oct4, Sox2, Klf4 and c-Myc) by using retroviruses

Example of somatic cell nuclear transfer in frogs
Destroy nucleus of unfertilized frog egg through UV light then inject the nucleus of adult frog skin cells into that egg. The frog will create normal embryo and turn into tadpole

What was the timeline in nuclear reprogramming (how quickly were Gurdon experiments replicated in mammals)
Took long time to before Gurdon experiments could be replicated

Who was the first mammal cloned and how did they do it
Dolly was cloned using transfer from a cell taken from a mammary gland. They fused the nucleus of a mammary gland cell with an enucleated egg cell and gave the egg cell an electrical shock, which triggered the start of cell division.
What is Dolly an example of
reproductive cloning
Was Dolly’s reproductive capacity affected
No, Bonnie was born through normal conception
Example of cell fusion
fusion between mouse ESC (mESC) and a somatic human B cell (hB)

What is heterokaryon and what is it caused by
it’s where two nuclei share a cytoplasm but don’t cycle. It’s caused by cell fusion

What was used for nuclear stain in cell fusion
5-hydroxymethylcytosine and DAPI

What does phalloidin do in cell fusion
delineates cytoplasmic membrane

How is mESC nucleus distinguished from human nucleus
by the presence of heterochromatic γ-satellite DNA at murine centromeric clusters
