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Major phases of the cell cycle
G1, S, G2, and M phase.
Phase where DNA replication occurs
S phase.
When cells rest outside the cycle
G0 phase.
Why cell-cycle progression must be ordered
Ensures DNA is replicated once and chromosomes segregate correctly.
Cell-cycle checkpoints
G1, G2, and M checkpoints; ensure DNA integrity, replication completion, and spindle attachment.
What Cdks are
Cyclin-dependent kinases that phosphorylate proteins to drive the cell cycle.
What cyclins are
Regulatory proteins whose levels rise and fall to activate Cdks.
Major cyclin-Cdk complexes
G1-Cdk, G1/S-Cdk, S-Cdk, M-Cdk; each triggers specific cell-cycle steps.
How cyclin-Cdk complexes are regulated
By cyclin levels, phosphorylation, dephosphorylation, and Cdk inhibitors.
Effect of phosphorylation on M-Cdk
Inhibitory phosphorylation keeps M-Cdk inactive until removed.
How mitotic Cdk is activated
Cdc25 removes inhibitory phosphates, triggering positive feedback.
Role of Wee1 kinase
Adds inhibitory phosphates to M-Cdk.
Role of Cdc25 phosphatase
Removes inhibitory phosphates to activate M-Cdk.
Effect of p27 inhibitor
Binds and inactivates cyclin-Cdk complexes.
What APC/C stands for
Anaphase-Promoting Complex/Cyclosome.
How APC/C works
Tags securin and cyclins with ubiquitin for degradation.
Role of ubiquitin in cyclin destruction
Marks cyclins for proteasomal degradation.
What triggers M-phase to G1 transition
APC/C-mediated destruction of M-cyclin.
What mitogens are
Signals that stimulate cell division by promoting cyclin production.
Role of Rb protein
Tumor suppressor that inhibits transcription factors for S-phase entry.
How mitogens affect Rb
Mitogens activate Cdks that phosphorylate Rb, releasing transcription factors.
How DNA damage pauses the cycle
p53 activates p21, which inhibits G1/S-Cdk and S-Cdk.
How the cell ensures one DNA copy
Origins licensed only in G1; S-Cdk prevents re-licensing.
How DNA is proofread
DNA polymerase 3'→5' exonuclease activity.
How DNA is corrected
Mismatch repair removes and replaces incorrect bases.
How S-Cdk initiates replication
Phosphorylates pre-RC components to start DNA synthesis.
How S-Cdk prevents re-replication
Phosphorylates ORC and Cdc6 to block new pre-RC formation.
Role of ORC Origin Recognition Complex;
binds replication origins.
Role of Cdc6
Helps load helicase to form pre-RC.
What must happen before nuclear division
DNA replication, chromosome condensation, spindle assembly, centrosome duplication.
How M-Cdk mediates G2→M transition
Phosphorylates proteins for mitotic entry.
How cell pauses if replication incomplete
Inhibits Cdc25 to prevent M-Cdk activation.
How M-Cdks help exit M-phase
Activate APC/C to destroy M-cyclin.
Stages of M-phase
Prophase, prometaphase, metaphase, anaphase, telophase, cytokinesis.
Mother cell
Original cell before division.
Daughter cells
Two cells produced after division.
Sister cells
The two daughter cells.
Chromatids
Identical copies of a chromosome.
Chromosomes
DNA molecules packaged with proteins.
What cohesins are
Rings that hold sister chromatids together.
Function of cohesins
Maintain chromatid pairing until anaphase.
What condensins are
Proteins that compact chromosomes.
Function of condensins
Condense chromosomes for segregation.
Stage when nuclear envelope disassembles
Prometaphase.
Stage when nuclear envelope reassembles
Telophase.
How nuclear envelope disassembles
Phosphorylation of lamins and pore proteins.
How nuclear envelope reassembles
Dephosphorylation of lamins and pore proteins.
What the mitotic spindle is
Microtubule-based machine that segregates chromosomes.
How the spindle works
Microtubules attach to kinetochores and pull chromatids apart.
How microtubules grow and shrink
Through dynamic instability.
What a kinetochore is
Protein complex at centromere where microtubules attach.
Three types of spindle microtubules
Astral, kinetochore, interpolar.
Role of APC/C in chromatid separation
Degrades securin to activate separase.
Molecular process of chromatid separation
Securin destroyed → separase cleaves cohesins.
Role of securin
Inhibits separase.
Role of separase
Cleaves cohesins to separate chromatids.
What happens if chromosomes attach improperly
Checkpoint blocks anaphase; errors cause aneuploidy.
How plant cells form new cell wall
Vesicles fuse to form cell plate during cytokinesis.
What apoptosis is
Programmed cell death.
How apoptosis works
Caspases dismantle the cell in a controlled manner.
Why apoptosis is important
Removes damaged or unnecessary cells; shapes tissues.
What caspases are
Proteases that execute apoptosis.
How caspases are used
Initiator caspases activate executioner caspases.
Types of caspases
Initiator (e.g., 8, 9) and executioner (e.g., 3, 7).
Intrinsic apoptosis regulation
Bcl-2 family controls mitochondrial permeabilization.
Intrinsic pathway mechanism
Bax/Bak release cytochrome c → apoptosome → caspase-9.
Extrinsic apoptosis activation
Death receptors bind ligands to activate caspases.
How survival factors work
Suppress apoptosis by increasing Bcl-2 or inhibiting pro-apoptotic proteins.
What growth factors are
Signals that promote cell growth by increasing protein synthesis.
Signals that inhibit survival or growth
Anti-growth factors or death ligands.
What cytokinesis is
Division of cytoplasm into two daughter cells.
How cytokinesis occurs in animals
Contractile ring of actin and myosin pinches cell.
How spindle determines cleavage plane
Spindle position dictates contractile ring placement.
How contractile ring divides cell
Actin-myosin contraction tightens ring to split cell.