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What is embryology and what does it cover?
"- the branch of biology concerned with the development of organisms.
•Embryonic development in the human, covers the first eight weeks of development after fertilization; at the beginning of the ninth week the embryo is termed a fetus.
•The normal period of gestation (pregnancy) is about nine months or 40 weeks.
"What are the stages of embryonic and fetal development?
What are the stages of the postnatal period?
"
•Infancy – approx. first year post birth
•Childhood – period between infancy and puberty
•Puberty – between 8-13 years of age functionally capable of procreation
•Adulthood – between the age of 18 - 21
"What happens in Fertilization to implantation in week 1?
"The sperm and egg join, and their genetic material (pronuclei) fuse to form a zygote.
What happens in the development of the Bilaminar Germ Disc in Week 2?
"
The inner cell mass splits into two layers:
Epiblast – tall cells that will form the embryo (high columnar cell).
Hypoblast – smaller cells beneath the epiblast (cuboidal cell).
Amniotic cavity and the primary yolk sac are formed.
The chorionic cavity and the chorionic plate are formed
Early blood vessels start to form, beginning the uteroplacental circulation (connection to the mother’s blood supply).
The connecting stalk (which becomes the umbilical cord) and secondary yolk sac are formed. (Diagram shows bilaminar disc with epiblast, hypoblast, amniotic cavity, yolk sac)
"What happens in the formation of the trilaminar disc?
"
Just remember each of these layers go on to form different things
Formation of three cell layers:
◦Ectoderm: Nervous system, epidermis, hair and nails, enamel of teeth, sensory epithelium, eye, ear and nose
◦Mesoderm - can differentiate to 3 types - paraxial mesoderm, intermediate mesoderm, lateral mesoderm: lining of body cavity, muscle, connective tissue, bone, blood and blood vessels
◦Endoderm: linings of digestive and respiratory tracts
(Diagram shows three germ layers: ectoderm (outer), mesoderm (middle), endoderm (inner))
"What happens in organogenesis weeks 3-8
"
Trilaminar germ disc folds and the cells differentiate into specific tissues and organs
◦Early development of all major organ systems
◦Neurulation – central nervous system development
◦Development of intraembryonic coelom (body cavity)
◦Development of primitive cardiovascular system
◦Development of Somites and the Musculoskeletal system
◦Development of the Digestive, Respiratory, Urogenital and other body systems
(Diagram shows developing embryo with neural tube, somites, heart prominence, and limb buds)
"What happens in embryo folding weeks 4-8 (the two types of folding)?
"
Longitudinal (puts the organ systems into the right places) and transverse folding (forms the tubes) converts the flat trilaminar embryonic disc into a C-shaped, cylindrical embryo
Transverse folding: Lateral edges fold inward, forming a tube (gut tube) and bringing the body walls together.
Longitudinal folding: Head and tail folds develop, moving the heart and other organs into position and creating the C-shape.
"What are the embryonic cavities?
Visceral - forms wall of primitive gut
Fetal circulation?
"- There are bypass shunts in fetal circulation: ductus venosus (liver bypass), foramen ovale (atrial septal opening), ductus arteriosus (pulmonary artery to aorta bypass) — these allow blood to skip the non-functioning fetal lungs."
What type of layer is involved in the musculoskeletal system?
What happens in limb development?
"- Onset of development of arm bud - 27 days
What is epigenetics?
Epigenetics is how genes are turned on or off without changing the actual DNA.
- switching on and off genes
- reversible
-In sperm and egg cells (gametes), epigenetic marks are reset
Why is epigenetics important?
"
•Mechanism to control global patterns of expression
•New therapies and diagnostics
•Future of precision medicine
•Understanding biology underpinning disease
•Maximizing value from genome data: EPIGENOME
"What are the mechanics of epigenetics (nucleosomes,euchromatin,heterochromatin)?
"
- DNA wraps around proteins called histones to form nucleosomes
- Changes (modifications) to the DNA or histone tails can control how tightly the DNA is packed.
•Euchromatin is loose and open, so genes can be read and switched on and template for transcription
•Heterochromatin is tightly packed and closed, so genes are switched off.
•EPIGENETIC mechanisms control euchromatin/heterochromatin transition (Diagram shows DNA wound around histones; loose = active, tight = inactive)
"What are the 4 main epigenetics mechanisms?
"
1.DNA modification
2.Histone modification
3.Remodelling complexes
4.Non coding RNA (ncRNA)
"What happens in DNA methylation?
"DNA methylation condenses (addition of methyl groups) promoter (acts like a switch) regions, making them less accessible and leading to gene silencing (can’t be turned on).
Is DNMT a therapeutic target?
DNA Methyl Transferases (DNMTs) are the enzymes that add methyl groups.
How good of a drug is DNMT?
What are the mechanics of histone modification (active + passive mechanism)?
"Passive Mechanism
Both types are REVERSIBLE processes. Histone modification can open and close chromatin
What are some impacts of inhibitors of histone deacetylases?
What is chromatin remodelling?
"
REMODELLING is the rearrangement of nucleosomes to a transcriptionally active state
Performed by complex enzyme machineries - group of enzymes like machines
Recruited by interactions with DNA & histone modifications: CROSSTALK (Diagram shows ATP-dependent remodelling complex sliding nucleosome along DNA to expose promoter region)
"What happens when you disrupt remodelling complexes?
"
Frequent mutations in cancer & neurological disorders
Potential biomarkers for diagnostics
Also, for prognosis- predicting the likely outcome
New therapeutic targets identified
Impact numerous signalling oncogenic (tumors) pathways
"What are the mechanics of non - coding RNA (ncRNA)
Some RNAs don’t make proteins — they have other jobs, like controlling gene activity.
How good of a drug are siRNA’s(short, double-stranded RNA molecules that silence specific genes.)?
✅ Good Things:
What are teratogens?
"
A teratogen is any substance, agent, or factor that causes malformations or abnormalities in a developing embryo or foetus when a pregnant woman is exposed to it. (Diagram shows examples: alcohol, thalidomide, rubella virus, radiation, certain drugs)
"Is there a future of epigenetics medicines, consider the advantages and disadvantages?
"Advantages: reversible, target specific genes, new therapies for cancer and neurological disorders. Disadvantages: off-target effects, delivery challenges, long-term safety unknown."
What is a pathogen?
A pathogen is defined as an organism causing disease to its host, with the severity of the disease symptoms referred to as virulence.
What are some examples of microbiological pathogens ?
Describe the structure of bacteria
"
What are the 4 steps for Gram staining?
"
Using a smear slide
1. Stain with crystal violet
2. Stain with Gram’s iodine
3. Decolorise with acetone
4. Counter stain with safranin
"What’s the difference between Gram + and Gram - bacteria(3)? (Remember positive peptidoglycan)
"Gram-positive: thick peptidoglycan layer, stains purple, retains crystal violet, no outer membrane, more sensitive to penicillin. Gram-negative: thin peptidoglycan layer, stains pink, has outer membrane with lipopolysaccharide (LPS), more resistant to antibiotics."
What features do we use to classify bacteria?
"
•Staining
•Shape
•Respiration
•Reproduction
•Genus
•Species
What are Koch’s 4 postulates to establish a relationship between a microbe and a disease?
"
1.The microorganism must be found in abundance in all organisms suffering from the disease
2.The microorganism must be isolated from a diseased organism and grown in pure culture.
3.The cultured microorganisms should cause disease when introduced into a healthy organism.
4.The microorganisms must be re isolated from the inoculated, diseased experimental host and identified as being identical to the original specific causative agent (Diagram shows flow: sick animal → isolate microbe → grow pure culture → inject healthy animal → animal gets sick → re-isolate same microbe)
"How do you investigate bacteria in the laboratory?
"
•Sample – blood, tissue, faeces,
•Culture – plates, liquid, within live animals, use of vector
•Microscopy – use of stains
•Biochemical tests – looking at metabolic processes specific to the bacterium
•Molecular tests – PCR and DNA sequencing
"What used to be used to treat bacterial infections in the past?
"
•Arsenic
•Bromine
•Mercury
•Honey
"What do we currently use to treat bacterial infections?
antibiotics - slow down the growth of bacteria
What is epidemiology?
Epidemiology is the study of how diseases spread, their causes, and the factors that influence their distribution in populations.
What does epidemiology tell us?
"
•Study the frequency of disease
•Examine and explain patterns and trends in where, when & for whom disease occurs
•Tells us which groups are at greater risk
•Provides basis for developing disease/poor health prevention and control measures
•Can be used to make predictions and to measure change
"What is prevalence and describe the 2 types?
What is the definition of incidence?
incidence refers to the number of new cases of a disease or health condition that develop in a specific population during a defined period of time.
What are the 2 types of incidence?
What is the difference between incidence and prevalence?
Incidence is about new cases; Prevalence is about total cases.
What is an epidemic?
What is an outbreak?
What is an endemic?
What are forgotten diseases?
Forgotten diseases = Neglected Tropical Diseases:
What is an emerging disease?
"
Due to a pathogen not observed within a population or geographical location before.
What is a reemerging disease?
caused by a known pathogen that shows up in a new geographical area or was once under control but starts spreading again or increasing in cases.
What is a zoonotic disease?
Infectious disease of animals that is transmitted to humans.
What is Disease X?
"“Disease X"" is a term used by the World Health Organization (WHO) to describe an unknown, hypothetical infectious disease that could cause a future epidemic or pandemic."
What is monkeypox?
Why is monkeypox an emerging disease?
Explain the impact of a newly emerging disease on health, society and the economy.
What is spillover?
Spillover refers to the process by which pathogens, such as viruses or bacteria, transfer from one species to another, particularly from animals to humans.
What are examples of recent zoonotic disease outbreaks?
What is avian influenza, include the types, transmission, symptoms, public health concerns, prevention + economic impact?
A viral infection affecting birds, primarily caused by H5N1 and H7N9 strains.
Describe the history of smallpox?
"
Smallpox
●millions of smallpox cases every year until the 1970s.
●in the century prior to eradication there were 500 million deaths
Variolation - Deliberate exposure to smallpox to induce a mild infection and immunity:
●First documented use in China and India in the 10th century
●Very popular across the globe by the 18th century
Inoculation - Introduction of an antigen to trigger an immune response:
●Edward Jenner used the Cow Pox pathogen to inoculate against smallpox in the 18th century
Vaccination
●Jenner’s work was the start of modern immunisation techniques using vaccination
●Smallpox was eradicated globally by the 1980s
"Describe the history of Polio.
"
Isolation
●First described in the UK in 1789
●Isolated in 1949 in the Boston Childrens Hospital
Vaccine
●Joseph Salk created an inactivated virus vaccine in 1950
●He tested on himself and his family in 1953
●1.6 million children were vaccinated in 1954
●Inactivated Polio Vaccine (IPV) was licensed in 1955
Impact
●By 1957, reported annual cases dropped from 58 000 to 5600, and by 1961, to 161
"What are HeLa cells and the ethical implications of them?
"
HeLa Cells
●Developed from the cervical tumour of Henrietta Lacks in 1951
●The cells are used in laboratories across the world and their positive impact on health and research is hard to overestimate
●No permission or consent was granted by Henrietta Lacks or her family
●No compensation or benefit has been made to her family
Ethical implications
●Autonomy
●Privacy
"Describe the action and function of a vaccine?
"
Vaccines
●A vaccine contains biological material resembling a pathogen
●Often inactive or weakened pathogens, toxins or antigenic material from the pathogen
●Vaccinations provide acquired immunity
Action
●Stimulation of an immune response
●Resulting in antibody production and immunological memory
"What are the 5 types of vaccines?
"
1.Live-attenuated
●Weakened live forms of the pathogen e.g. measles, mumps and rubella
2.Inactivated
●‘Dead’ pathogens e. g. polio vaccine
3.Subunit, polysaccharide, polypeptide or conjugate
●Using antigenic material e.g hepatitis B
4.Toxoid
●Using inactive toxin e.g. tetanus, diptheria
5.mRNA
●Using viral mRNA e.g. Covid
"What are the benefits of a vaccine?
"
Protection from disease
●Reduced severity of illness
●Herd immunity
●If 70-90% of the population is vaccinated, the spread of disease is limited
●This protects those unvaccinated (due to age or health status)
●Economic and Public Health impact
●Immunisation programmes reduce healthcare costs associated with treatment, hospitalisation and resultant disability
●Improved global health security
"What are the risks (side effects) of vaccinations?
"
Common / mild
●Swelling, fever
●Uncommon / moderate
●Allergic response 1 in 1 million for MMR vaccines
●Seizure 1 in 3-4 thousand for MMR vaccines
●Rare / serious
●Myocarditis and pericarditis 1 per hundred thousand for mRNA COVID vaccines (usually in young men)
●Thrombosis less than 1 per million for COVID vaccines (usually in young women)
●Long term effects
●Frequently discussed but investigations into suggested links have shown no evidence (e.g. into link between HPV vaccines and rheumatoid arthritis)
"What are the challenges and ethical issues of vaccinations?
"
●Parental consent
●How much autonomy should parents have when public health is at risk?
●Should vaccination be mandatory for enrolment in schools?
●Vaccine hesitancy
●Concerns over safety, mistrust in industry and government contribute to parental refusal or delay
●This compromises herd immunity leading to outbreaks and deaths
●Side effects and risks
●These do exist but are most often outweighed by the risk of the disease
●How can this be communicated?
●Distribution
●There are often inequalities in vaccine distribution between the Global North and Global South.
"Describe HIV/AIDS in relation to the role of vaccinations.
"
●HIV was confirmed as the cause of AIDS in 1984
●It is now a global health challenge with ~ 38 million people living with HIV worldwide.
●A vaccine was ‘promised’ within two years, but there is still no effective HIV vaccine.
●What makes it so difficult -
●HIV is latent (hide in body but still spread) but infectious for long periods - vaccines protect against active disease
●Most people don’t recover from AIDS, so there’s no natural immune response for scientists to copy.
- We can’t use a weakened (attenuated) or killed version of HIV in a vaccine because it doesn’t trigger a strong enough immune response.
- HIV mutates very quickly, creating lots of different versions — this makes it hard to target.
- There is already effective treatment (ART), so the urgency for a vaccine is reduced, but it’s still needed.
"Describe COVID-19 in relation to the role of vaccinations in healthcare.
"
●The fifth-deadliest pandemic / epidemic in history
●More that 7 million confirmed deaths worldwide to date.
●A vaccine was developed in less than 1 year
●Researchers built on new technologies including mRNA vaccines
●Academics and industries worked together with the support of government agencies
●Equity
●The vaccine rollout faced challenges with vaccine hesitancy, misinformation and unequal global distribution which continue
"What is the MMR controversy?
"
●The MMR vaccine protects against mumps, measles and rubella
●Measles
●In 2022 it was estimated there were over 130 000 deaths due to measles (WHO)
●Deaths are mainly in unvaccinated / under vaccinated children of under 5 years old
●Vaccination is thought to have averted 57 million measles deaths between 2000 and 2022 (WHO)
●Andrew Wakefield published a now discredited paper in The Lancet in 1998
●This suggested a possible link between the MMR vaccine and autism
●The research was flawed, violated ethics and used manipulated data
●Subsequent studies have prove that there is no link between the MMR vaccine and autism
"What is the impact of the MMR controversy?
"
●There is ongoing controversy particularly in the UK and the US
●There are lower vaccination rates in many countries
●The proportion of children receiving a first dose of measles vaccine was 83% in 2023, below the 2019 level of 86% and below the level required for herd immunity
"What could be the future of vaccinations in relation to healthcare?
"
Public education - clear, transparent, science-based explanations addressing concerns
●Community engagement - tailored messaging delivered by trusted members of the community.
●Reducing barriers to access - travel, cost, convenience
●Policy - mandates, incentives
●Peer influence - highlighting uptake rates, and promoting social norms
●Digital tools - reminders and digital health records
"What are environmental health practitioners and their goal?
"- they ensure that all the physical environments in which we work, eat, live + play are safe
Where do EHPs work?
they work in all sizes + types of businesses all over the world including local authorities, government departments, the NHS , armed services + more.
What are the skills needed for EHPs?
problem solving, working in partnership with others to seek holistic solutions, effective communication
What are the disciplines of environmental health?
What do EHPs do in response to environmental protection?
What do EHPs do when it comes to to land use?
Define a pathogen and how they cause disease in humans.
An organism that causes disease to its host
What are the 6 pathogens and underline those that are microbiological?
What is an example of bacteria?
Mycobacterium tuberculosis - tuberculosis
What is an example of a virus?
varicella-Zoster virus (VZV) - chickenpox
What is an example of fungi?
Candida albicans - vaginal thrush
What is an example of a protozoa?
Plasmodium species - Malaria
What is an example of Helminths?
Flatworms - tapeworm
What is an example of Prions?
Creutzfeldt Jakob Disease
What is the structure of bacteria?
"Bacterial structure: cell wall (peptidoglycan), plasma membrane, cytoplasm, ribosomes, nucleoid (DNA), capsule (some), pili, flagella. Diagram shows labelled cross-section."
What are the different forms of bacteria?
"Cocci (spherical), Bacilli (rod-shaped), Vibrios (comma-shaped), Spirochetes (tightly coiled spirals). (Diagram shows the four shapes)"
How do you carry out gram staining using a smear slide?
What is the difference between Gram + and Gram - bacteria?
"Gram-positive: thick peptidoglycan, stains purple, no outer membrane. Gram-negative: thin peptidoglycan, outer membrane with LPS, stains pink. (Diagrams compare cell wall structures)"
What materials can prevent movement of substances through the cell wall and uptake of the gram staining?
fatty acids
What staining method is used to visualise cells under a microscope?
the Ziehl-Neelsen staining method
What are the 6 features used to classify bacteria?
What are Koch’s 4 Postulates for a casual relationship between a microbe and a disease to be established?
What 4 substances were used in the past to treat bacterial infections?
What is used to treat bacterial infections in the present?
penicillin
What are B-lactams (target,mechanism of action, example,static/cidal, microbiological spectrum, administration, toxicology)?
Target - cell wall synthesis
What are B-lactams 4 resistance mechanisms?
Permeability, Efflux, Inactivation, Target modification
What are glycopeptides (target,mechanism of action, example,static/cidal, microbiological spectrum, administration, toxicology)?
target - cell wall synthesis
What are polymyxins (cell membrane) (target,mechanism of action, example,static/cidal, microbiological spectrum, administration, toxicology)?
target - cell wall synthesis
What makes a good therapeutic target for antibiotics?
Need a target not present in host cells to lessen TOXICITY
What are the 4 D’s for antimicrobial stewardship?
Right Drug