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What microbe causes tuberculosis?
Mycobacterium tuberculosis
How does Mycobacterium tuberculosis cause disease?
-spread through aerosol droplets; primarily infects the respiratory tract, particularly ___ ___
-can also spread to lymph nodes
alveolar macrophages
How does Mycobacterium tuberculosis cause disease?
-disease is caused by ___ ___ ___ (CMI)
cell mediated immunity
How does cell-mediated immunity work in TB?
1. IFN cannot fully activate the macrophage (so TB remains in cell)
2. More T cells enter the lung
3. Prolonged ____ response (kills lung tissue, but not TB)
4. ___ results (hole in lung tissue)
inflammatory, cavitation
How does Mycobacterium tuberculosis cause disease?
-TB can remain ___ in granulomas for years. During this time, the patient is asymptomatic. However, the TB can exit latency if the immune system ___
dormant, weakend
granulomas = __ cells and other ___ surrounding TB infected macrophages in a "collar"
T, macrophages
What microbe causes Hansen's Disease or Leprosy?
Mycobacterium leprae
How does Mycobacterium leprae cause disease?
-chronically infects the __ and __ ___
skin, peripheral nerves
Which microbe is part of the Mycobacterium avium complex (MAC) along with M. intracellulare?
Mycobacterium avium
What virus causes a CNS disease called Progressive Multifocal Leukoencephalopathy (PML)?
JC Virus (polyomavirus)
What virus commonly causes diarrhea in children?
Rotavirus
Dengue Virus causes "___ fever" and ____ fever in severe cases
breakbone, hemorrhagic
How does Dengue Virus cause disease?
-utilizes ___-__ enhancement
antibody-dependent
How does Dengue Virus cause disease?
-antibody-dependent enhancement → in second Dengue infection, ____ antibodies that were previously generated against a different strain of DENV are present in body
heterotypic
How does Dengue Virus cause disease?
-antibody-dependent enhancement → the heterotypic antibodies bind to the Dengue virus, but are ___-___ (useless bc does not block function of the virus)
non-neutralizing
How does Dengue Virus cause disease?
-antibody-dependent enhancement → ___ pull in the heterotypic antibodies that are attached to Dengue; Dengue ____ in the macrophage
macrophages, replicates
What yeast causes Oral Candidiasis, Thrush, and Vulvovaginal Candidiasis?
Candida Albicans
What yeast is the most common cause of nosocomial candidaemia and forms biofilms?
Candida Tropicalis
What yeast is seen in 20% of pediatric patients with bloodstream infections?
Candida Glabrata
What yeast species causes meningitis and pneumonia?
Cryptococcus
What new strain of cryptococcus causes lethal disease in healthy people?
Cryptococcus gatti
What dimorphic yeast causes "Ohio Valley Disease," "Caver's Disease," and histoplasmosis?
Histoplasma
What dimorphic yeast causes Valley Fever or San Joaquin Fever?
Coccidiodes
How do dimorphic yeasts (histoplasma, blastomyces, coccidiodes) cause disease?
-___ ___ between yeast form (more pathogenic) and mycelial form
phase transition
What dermaphyte causes ringworm?
Tinea Corporis
What dermaphyte affects scalps/hair follicles?
Tinea Capitis
What dermaphyte causes jock itch?
Tinea Cruris
What dermaphyte causes Athlete's foot?
Tinea Pedia
How do dermaphyte infections (tinea) cause disease?
-produce extraceullar enzymes called ___ that hydrolyze keratin in the skin
-___ in the cell wall inhibit the host immune response
keratinases, mannans
What fungus is associated with seasonal allergies and lung infections?
Aspergillus
How does Aspergillus cause disease?
-Inhalation of ___ (spores) into the lungs
-In patients with preexisting lung damage, spores can grow into a fungus ball (___)
-Invasion can spread beyond lungs, potentially fungal meningitis
conida, aspergilloma
What fungal infection is opportunistic and affects the sinuses, brain, and lung?
Mucormyosis
How does influenza cause disease?
-The immune response contributes to pathogenesis of influenza via ___ ___ and ___ ___
interferon production, cytokine storm
How does influenza cause disease?
-interferon production is ____ for clearance of influenza (but makes you feel terrible; numerous side effects like fever, aches, chills)
required
How does influenza cause disease?
-cytokine storm = massive overproduction of cytokines
-associated with ___ of otherwise healthy people
death
How does influenza cause disease?
-Loss of cilia is a ___ ___ (CPE) of the influenza virus
-Result = Patients are more susceptible to opportunistic infections like pneumonia
cytopathic effect
Anti-Viral Therapy for Influenza
-What envelope protein is the goal for vaccination (target of neutralizing antibodies)?
hemagglutinin
Anti-Viral Therapy for Influenza
-What envelope protein is inhibited by most influenza drugs?
neuraminidase
Anti-Viral Therapy for Influenza
-What protein (that is a part of RDRP), can we inhibit with Baloxavir?
Polymerase acidic (PA) protein
How does influenza cause disease?
-virus can undergo reassortment (example of ___ ___)-which is responsible for pandemics
-antigenic drift also occurs and is due to mutations from RDRP
antigenic shift
What causes the Common Cold?
-____ (30-50%)
-____
-____
-other
Rhinoviruses, Coronaviruses, Adenoviruses
How do Rhinoviruses cause the common cold?
-does not kill the epithelium, but instead disrupts ___ ___ to increase vascular leakage and mucus production
tight junctions
How do Rhinoviruses cause the common cold?
-most symptoms of the infection are caused by the immune response (high levels of __-__ and other cytokines)
IL-8
How do Rhinoviruses cause the common cold?
-increased prostaglandins trigger ___ response (makes you sneeze)
parasympathetic
How does SARS-CoV2 cause disease?
-binds to _____ receptor on host cells (found in many tissues, which is why the disease is not limited to our respiratory tract)
ACE2
SARS-CoV2 infection can cause mild respiratory infection, pneumonia, acute respiratory distress syndrome (___), ___ conditions, and ___ complications
ARDS, Cardiac, CNS
SARS-CoV2 infection can cause ARDS, which is a serious lung condition that causes __ to build up in the lungs
fluid
SARS-CoV2 infection can cause cardiac complications via __ of angiotensin system and possibly ___ ___
dysregulation, cytokine storm
SARS-CoV2 infection can cause CNS complications including loss of smell and taste, acute __ disease, ___, and ___-___ syndrome
cerebrovascular, encephalitis, Guillain-Barre
Anti-Viral Therapy for SARS-CoV2
-we can target the ___ ___ for vaccination (generate neutralizing antibodies)
spike protein
Anti-Viral Therapy for SARS-CoV2
-we can target ___ in the early disease course with Paxlovid
protease
Anti-Viral Therapy for SARS-CoV2
-we can target ___ in the early disease course with Molnupirivir
RDRP
Anti-Viral Therapy for SARS-CoV2
-we can target the cytokines/pathways in the late disease course with __-__ inhibitors and ___ inhibitors
IL-6, JAK
Anti-Viral Therapy for SARS-CoV2
-we can target the cytokines/pathways in the late disease course with systemic ___
corticosteroids
What herpes virus causes cold sores, fever blisters, genital herpes, and is the leading cause of acquired blindness in the US?
HSV-1 (Herpes Labialis)
What herpes virus is the primary cause of genital herpes?
HSV-2
Both HSV-1 and HSV-2 can cause serious complications in neonates, including skin lesions and eye involvement, with the most severe manifestation being ___ infection (CNS involvement), which can be life-threatening.
disseminated
How do HSV-1 and HSV-2 cause disease?
-become latent in ___ ___ (HSV-1 latency occurs best in trigeminal ganglia, and HSV-2 latency occurs best in sacral ganglia)
-lytic phase occurs in ___ cells (blisters)
sensory neurons, epithelial
How do HSV-1 and HSV-2 cause disease?
-reactivation is triggered by ___ (physical and mental) and ___ changes
stresses, hormonal
How do HSV-1 and HSV-2 cause disease?
-after reactivation, viral replication begins in the nucleus of the neuron
-virions are transported down the axon to the skin
-causes ___ at the surface of the skin
lesions
Anti-Viral Therapy for HSV-1 and HSV-2
-These viruses encode a ___ ___ ___, which activates Acyclovir
(activated drug then inhibits viral DNA polymerase)
viral thymidine kinase
What herpes virus causes chicken pox as a child and shingles as an adult?
VZV
How does VZV cause disease?
-child is infected with chicken pox and starts as respiratory infection; rash starts 10 days later as infected ___ carry VZV throughout the body
lymphocytes
How does VZV cause disease?
-as an adult, VZV can be reactivated as immunity wanes, which can lead to __-__ ___
post-herpetic neuralgia
What herpes virus causes Infectious Mononucleosis, Burkitt's Lymphoma, and can trigger Multiple Sclerosis (MS)?
Epstein-Barr Virus
How does Epstein-Barr Virus cause disease?
-replicates in ___ cells
-in the tonsils, the virus is released into the ____ (kissing disease)
-illness typically lasts for a month (starts as fever and sore throat, progresses to fatigue, enlarged lymph nodes/spleen)
-remains ___ in B cells
B, saliva, latent
What herpes virus is latent in dendritic cells but can become a problem for the immunosuppressed, and is the most common congenital infection in the US (can lead to developmental delays and microcephaly)?
CMV
What herpes virus can cause Kaposi's Sarcoma (cancer of blood vessels and lymph vessels)?
Herpesvirus Type 8
What herpes viruses cause Sixth' Disease (ie exanthium subitum, rosela infantum), which affects kids <5 and involved high fever, rash, and febrile seizures?
Herpesvirus Type 6, Herpesvirus Type 7
What parasite causes enterobiasis (itchy anal region, disturbed sleep)?
Pinworm
How do pinworms cause disease?
-spread via fecal-oral route
-when host is asleep, the female pinworm will emerge from the anus and lay ____, which leads to itching
eggs
What parasite is associated with most severe cases of malaria?
Plasmodium falciparum
What parasite is the most common cause of malaria?
Plasmodium vivax
How does the Plasmodium spp. cause Malaria?
-Sexual reproduction in mosquitoes and asexual reproduction in humans
-Infect hepatocytes first → then invade ____
RBCs
How does the Plasmodium spp. cause Malaria?
-Uncomplicated Malaria:
-malarial paroxysms develop, which are cycles of intense cold, intense heat/headache, and profuse sweating/exhaustion
-cause of fever = RBC ____ and release new ___ (ie release next set of parasites that go on to infect next set of RBCs)
rupture, merozoites
How does the Plasmodium spp. cause Malaria?
-Complicated Malaria:
-Plasmodium falciparum can block ___ in different organs (viral load is so high that it causes "clogs")
capillaries
How do ectoparasites cause Lice?
-Completing their life cycle on the host (__ → ___ → ___)
eggs, nymphs, adults
How do ectoparasites cause Scabies?
-lay eggs in upper layer of __
-infection with thousands of mites/eggs = ___ ___
skin, crusted scabies
What bacteria causes the travel infection Leptospirosis?
Leptospira
How does Leptospira cause disease?
-the __ end of the spirochete bacteria allows for burrowing into tissues, leading to interference with __ binding and systemic infection
hooked, complement
What flaviviruses can cause febrile illness?
all (Dengue, Zika, West Nile, JEV, St. Louis)
What flaviviruses can cause arthritis?
Dengue, Zika
What flavivirus can cause arthritis that progresses to hemorrhagic fever?
Dengue
What flavivirus can cause arthritis that microcephaly?
Zika
What flaviviruses can cause encephalitis?
West Nile, JEV, St. Louis, rarely Dengue
How does HIV cause disease?
-Infecting and destroying ___ T helper cells
-Leading to opportunistic infections and AIDS
CD4
Anti-Viral Therapy
-What are the 2 viral proteins we can inhibit to prevent viral entry in HIV?
gp120, gp41
Anti-Viral Therapy
What drug binds to gp120 and blocks CD4 binding?
Rukobia
Anti-Viral Therapy
What drug binds to CD4 and and prevents gp120 from attaching?
Trogarzo
Anti-Viral Therapy
What drug inhibits CCR5?
Maraviroc
Anti-Viral Therapy
Which drug binds to gp41 and blocks it from snapping shut and fusing membranes together?
Fuzeon
___ is mediated by gp120
attachment
___ is mediated by gp41
fusion
Anti-Viral Therapy
-What are the 2 viral proteins we can inhibit to prevent viral replication in HIV?
reverse transcriptase, integrase
Anti-Viral Therapy
-What are the 2 viral proteins we can inhibit to prevent viral maturation and assembly?
protease, capsid