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5 functions of digestive system
Ingestion of nutrients
Secretion
Mechanical and chemical processing
Excretion
Absorption
ingestion of nutrients
Food and liquids enter the body through the mouth
Begins the digestive process
Allows the body to take in nutrients needed for energy and health
Digestion of food begins in the mouth
mechanical and chemical processing
Chewing and muscle contractions to break food into smaller pieces
Prepares food for easier digestion
secretion
Digestive organs release substances into the GI tract
Includes enzymes, acids, bile and mucus
Helps break down food and protect digestive tissues
absorption
The movement of nutrients from digested food into the blood or lymph
Happens mostly in the small intestine
Allows the body to use nutrients for energy, growth, and repaire
excretion
Undigested material becomes waste
Waste moves to the large intestine because water is absorbed
Feces are eliminated from the body
digestive gross anatomy
Mouth
Esophagus
Stomach
Small intestines
Large intestines
Rectum
mouth
Entry point for food into the digestive tract
Teeth chew food to break it into smaller pieces (mechanical digestion)
Saliva begins chemical digestion
esophagus
Muscular tube that connects the mouth to the stomach
Peristalsis (wave like muscle contractions) move food downward
Transports the bolus to the stomach for further digestion
small intestine
Main site of digestion and nutrient absorption
Enzymes and bile break down food further (chemical digestion)
Nutrients pass into the blood or lymph for the body to use
large intestine
absorbs water and electrolytes from indigestible food
Forms and stores feces until elimination
Houses bacteria that help break down some remaining nutrients
rectum
Stores feces before they are eliminated
Signal the body when it's time to have a bowel movement
Ends the digestive tract for excretion
4 accessory organs of the GI tract
Accessory organs > aids digestion but food does not pass through it
Salivary glands
Liver
Pancreas
Gallbladder
salivary glands
Produces saliva containing:
Water and mucus to lubricates food
Enzymes (ex: amylase) which begins starch digestion
Helps form the bolus for easy swallowing
Supports oral hygiene by washing away food and bacteria
liver
Produces bile, which emulsifies fats for digestion
Processes nutrients from the hepatic portal vein
Performs metabolism: carbohydrates, amino acids, lipids and detoxification
pancreas
Produces digestive enzymes (amylase, lipase, proteases) for the small intestine
Secretes bicarbonate to neutralize stomach acid in the small intestine
Supports chemical digestion of carbs, fats, and proteins
gallbladder
Stores and concentrates bile produced by the liver
Release bile into the small intestine when fats are present
Helps emulsify fats to increase digestion efficiency
4 layers of the GI tract
Serosa
Muscularis
Submucosa
Mucosa
Serosa
Outermost layer of the digestive tract
Made of connective tissue and a layer of epithelial cells
Protect organs and reduces friction as they move in the abdominal cavity
muscularis
Made of muscle and nervous tissue
Muscle: moves and mixes food through peristalsis and segmentation
Nervous tissue > coordinates contractions via the myenteric plexus
Important > essential for motility and proper digestion
myenteric plexus
Network of nerves located between the circular and longitudinal muscle layers of the muscularis
Control muscle contraction for peristalsis and segmentation
Essential for coordinating motility throughout the digestive tract
submucosa
Made of connective, nervous, and lymphatic tissue
Connective tissue > supports the mucosa and binds it to the muscularis
Nervous tissue (submucosal plexus) > regulates secretion and local blood flow
Lymphatic tissue > helps defend against pathogens in the gut
mucosa
Made of epithelial, muscle, nervous, and lymphatic tissue
Epithelial tissue > lines the lumen and absorbs nutrients
Muscle tissue > creates fold and movement to mix food
Nervous and lymphatic tissue > coordinate secretion, absorption, and immune defense
muscularis externa
Smooth muscle layer of muscularis that creates GI motility
Inner circular layer > squeezes the lumen to mix and push food
Outer longitudinal layer > shortens the tube to move food along
Myenteric plexus > major site of nerve control in the GI tract, mostly parasympathetic
Surrounds the lumen, allowing controlled movements based on radius and length
mucosa: epithelium
Top of the mucosa, lines the lumen
Simple or stratified columnar cells
Cell types:
Enterocytes > absorb nutrients
Enteroendocrine cells > secrete hormones
Mucin- producing cells > secrete mucus for protection
mucosa: lamina propria
Connective tissue layer beneath the epithelium
Supports small blood vessels and lymph nodes
Provides nutrient supply and immune defense
mucosa: muscularis mucosae
Thin layer of smooth muscle
Shapes fold (villi) and microvilli to increase surface area
Aids movement of mucosa for better absorption and secretion
motility: peristalsis
Found in: esophagus, stomach, small intestine, large intestine
wave like contractions of smooth muscle
Primary function > moves food forward through the GI tract
motility: segmentation
Back and forth movements that mix food with digestive juice
Found in > small intestine
Primary function > mixes chyme to enhance digestion and absorption
motility: tonic contractions
Sustained, long contractions of smooth muscle
Found in sphincter muscles
Function > prevent backflow of food
motility: phasic contractions
Short, quick contractions of smooth muscle
Present throughout GI tract
Function > produce forward and mixing movements of food
macro motility
large coordinated movements that move food along the GI tract
Examples > peristalsis (forward movement) and segmentation (mixing in small intestine)
micro motility
small, local contractions that control movement and mixing within a section
Examples: tonic contractions (sphincters) and phasic contractions (short, rhythmic contractions)
important molecules for motility
Smooth muscle contraction is controlled at the cellular level
Important molecules:
Calcium (Ca 2+) > triggers contraction
Calmodulin > binds calcium to activate MLCK
Myosin light chain kinase (MLCK) > phosphorylates myosin to enable contraction
Regulation for contraction:
Cyclic nucleotides > modulate contraction/ relaxation
Protein kinase A (PKA) > can inhibit contraction via phosphorylation
Myosin light chain phosphatase (MLCP) > removes phosphate, causing relaxation
calmodulin
binds calcium to activate MLCK
Myosin light chain kinase (MLCK)
phosphorylates myosin to enable contraction
Cyclic nucleotides
modulate contraction/ relaxation
protein kinase A (PKA)
can inhibit contraction via phosphorylation
Myosin light chain phosphatase (MLCP)
removes phosphate, causing relaxation
apical surface
faces the lumen (inside the GI tract, "external")
Function depends on epithelial specializations in the mucosa
basolateral surface
faces the blood (inside the body, "internal")
Function depends on epithelial specializations in the mucosa
secretion and absorption cellular layout
Mucosal cell line the inside of the GI tract and separate lumen (food inside the gut) from the blood
ICF (intracellular fluid) / cytosol is the inside of the cell, where nutrients and molecules move through before reaching the blood
This setup allows selective movement of molecules:
From the lumen > cytosol > blood (absorption)
From the blood > cytosol > lumen (secretion)
Think of the mucosal cell as the gatekeeper, controlling what enters and leaves the body
From the lumen > cytosol > blood
absorption
From the blood > cytosol > lumen
secretion
overview of secretion and absorption
Secretion > substances move from blood/ cytosol > lumen
Absorption > substances move4 from lumen > cytosol/blood
Together, they allow digestion, nutrient uptake, and protection
mechanical digestion
Physically breaks down food into smaller pieces
Examples > chewing and stomach churning
Prepares food for easier chemical digestion
chemical digestion
Enzymes break down macromolecules into absorbable forms
Starches > simple sugars
Polypeptides > amino acids
Triglycerides > free fatty acids and monoglycerides
Makes nutrients small enough to be absorbed by the small intestine
carbohydrate digestion
Starches > simple sugars (monosaccharides)
Enzymes like amylase break down complex carbs
Only simple sugars can be absorbed into the blood
protein digestion
Polypeptides > amino acids
Broken down by
Endopeptidases > cut inside the chain
Exopeptidases > remove amino acids from chain ends
Absorbed as amino acids, dipeptides or tripeptides
fat digestion
Triglycerides > free fatty acids and monoglycerides
Bile emulsifies fats > small droplets
Lipases break down triglycerides
Form micelles for absorption into the small intestine
digestion > complex to simple
Meal (large, complex): contains starches, polypeptides, triglycerides
Broken down (smaller, complex): partially digested starches, proteins, fats
Components absorbed (small, simple)
Simple sugars
Amino acids
Free fatty acids and monoglycerides
GI enzymes
Small intestine > main site of digestion and absorption
Enzymes usually working pairs for efficiency
Break down carbs, proteins, and fats
carbohydrate digestion
only simple sugars (monosaccharides) like glucose, fructose, and galactose can be absorbed into the blood
Complex carbohydrates (starches, disaccharides) must be broken down by enzymes before absorption
Digestion starts in the mouth and continues in the small intestine with pancreatic and brush border enzymes
steps of carbohydrate digestion
Mouth:
Chewing + salivary amylase begins starch breakdown
Small intestine:
Pancreatic amylase continues starch digestion
Brush border enzymes (ex: maltase, lactase, and sucrase)
Located on the microvilli of enterocytes
Finish breaking down disaccharides into monosaccharides (glucose, fructose, galactose)
Monosaccharides are ready for absorption
isocaloric vs isometabolic
Key difference > calories vs metabolic effect
isocaloric
same number of calories in a meal or diet
isometabolic
produces the same metabolic response (energy use, blood sugar, etc.
absorption of carbohydrates: apical surface
Happens in the small intestine at the surface of intestinal cells
SGLT1:
Moves glucose and galactose into the cell
Uses sodium (Na +) to help pull sugar in, even if their levels are higher inside the cell
GLUT5:
Moves fructose into the cell
Works passively, letting fructose flow from high > low concentration
Simple summary:
SGLT1 > uses energy (Na+) to bring glucose and galactose
GLUT5 > passive, brings in fructose
SGLT 1
Moves glucose and galactose into the cell
Uses sodium (Na +) to help pull sugar in, even if their levels are higher inside the cell
apical surface
GLUT 5
Moves fructose into the cell
Works passively, letting fructose flow from high > low concentration
apical surface
absorption of carbohydrates: basolateral surface
GLUT2 > transports all monosaccharides from the cell into the blood
Ensures nutrients move efficiently from the lumen to circulation
digestion: protein endopeptidases
Endopeptidases > enzymes that cut peptide bonds within the protein chain (inside the molecule)
Starts in the stomach and continues to the small intestine
Examples:
Stomach > pepsin
Pancreas > trypsin
Small intestine peptidases
Function > break large proteins into smaller fragments
digestion: proteins exopeptidases
Exopeptidases > enzymes that remove amino acids from the ends of peptide chains
Start in the small intestine, mainly from pancreatic secretions
Example: carboxypeptidase
Proteins absorbed in multiple forms, but amino acids are preferred
Breakdown pathway > proteins > smaller proteins > tri/dipeptides > amino acids
absorption of proteins
Occurs in the small intestine
Transport mechanisms:
Amino acids > absorbed through Na+ symport
Di and tripeptides > absorbed through H+ symport
Large peptides > absorbed via transcytosis (endocytosis)
di and tripeptides
absorbed through H+ symport
amino acids
absorbed through Na+ symport
large peptides
absorbed via transcytosis (endocytosis)
fat digestion mechanical and emulsification
Bile from the liver breaks large fat droplets into smaller ones (emulsification)
Prepares fat for efficient enzymatic digestion
fat digestion: chemical
Pancreatic lipases break triglycerides into
Monoglycerides
Free fatty acids
Converts fats into forms small enough for absorption
fat digestion : micelles and diffusion
Micelles carry monoglycerides and fatty acids to the intestinal lining
Absorption occurs mostly in the small intestine
Fat molecules enter enterocytes through diffusion
absorption: fats
Occurs in the small intestine
Chylomicron formation > packs fats, proteins, and cholesterol into transport particles
Exocytosis > chylomicrons enter the lymphatic system (lacteals) for transport to the body
hepatic portal system
Venous blood from the gut flows into the portal vein
Blood passes through the liver before entering the hepatic vein > vena cava
Liver metabolism includes
Carbohydrates > regulation and storage
Amino acids > processing and protein synthesis
Lipids > metabolism and packaging into lipoproteins
Detoxification > removal of toxins and drugs
alcohol metabolism and liver
Alcohol dehydrogenase (ADH) > converts ethanol (EtOH) > acetaldehyde
Acetaldehyde > toxic, causes headaches, vomiting and is carcinogenic
Acetaldehyde dehydrogenase (ALDH) and Glutathione > break down acetaldehyde into less harmful compounds
Acetaldehyde dehydrogenase (ALDH) and Glutathione
break down acetaldehyde into less harmful compounds
Alcohol dehydrogenase (ADH)
converts ethanol (EtOH) > acetaldehyde
Acetaldehyde
toxic, causes headaches, vomiting and is carcinogenic
phases of integrated meal response
Cephalic phase
Gastric phase
Intestinal phase
Colonic phase
cephalic phase
Region: head and esophagus
First step: chewing (mechanical digestion)
saliva (structure)
Produced by parotid, sublingual, and submandibular glands (autonomic regulation)
Made by acinar cells, which connect to ducts that carry saliva into the mouth
Composition:
Mostly water and ions, plus important chemicals:
Fluoride > strengthens enamel
Bicarbonate > neutralizes acids
Lysozymes > antibacterial
saliva (function)
Begins chemical digestion of carbs (salivary amylase)
Small amount of lipid digestion (salivary lipase, high in infants)
Lubricates food to prevent choking
bolus formation and transportation
Chewed food and saliva > bolus
Tongue moves bolus back of mouth
Peristalsis moves bolus through esophagus to stomach
swallowing steps
Oral phase > tongue pushes bolus against the soft palate, triggering the swallow reflex
Pharyngeal phase > upper esophageal sphincter relaxes while the epiglottis closes to keep food out of airway
Esophageal phase > food moves down the esophagus through peristalsis
esophagus: structure and swallowing
Contains two sphincters
Upper esophageal sphincter (UES) > skeletal muscle, voluntary control
Lower esophageal sphincter (LES) > smooth muscle, involuntary control
Swallowing > mostly involuntary (also called swallowing reflex)
Relaxation of UES allows bolus to enter esophagus
Food moves down via peristalsis (phasic smooth muscle contraction) + gravity (assists but not required)
pressure gradients and function
Swallowing reflex requires coordinated contraction and relaxation of smooth muscle, which creates pressure gradients
Pressure gradients are critical for moving bolus
Lower esophageal sphincter (LES) must:
Open to allow food into the stomach when the pressure in the stomach is higher
Stay closed at other times to prevent reflux
Increased BMI causes increased IAP and IGP
Increased IGP and GEPG increases risk of HH
IEP decreases with age, increasing GEPG
achalasia
Disorder where high pressure in the LES (lower esophagus sphincter) makes it difficult to move the bolus
Esophageal peristalsis is impaired > food may get stuck
Can cause regulation, chest discomfort, or difficulty swallowing solids and liquids
Treatment > sometimes requires surgical opening or dilation of LES
GERD
Gastroesophageal reflux disease
Caused by LES failure > stomach contents reflux into esophagus
Contributing factors: caffeine, alcohol, cigarettes, chocolate
Consequences:
Indigestion
Heartburn
Esophageal irritation from the stomach
gastric phase
Events in the stomach when food enters
anatomical regions of the stomach
Cardia
Fundus
Body
Antrum
Pyloric sphincter
functional divisions of the stomach
Proximal stomach (reservoir)
Cardiac stomach, fundus, and body
Stores food
Distal stomach (pump/grinder)
Antrum, pyloric sphincter
Mixes, grinds, pumps
stomach structure and motility (proximal)
Rugae > gastric folds > increase surface area and allows stomach to stretch for food volume
Proximal stomach > low peristalsis, mainly accommodates food
Empty regulation > stretch receptors, vasovagal reflex, small intestine feedback
stomach structure and motility
Distal stomach motility > strong peristalsis due to oblique muscle layer > mechanical digestion
Mixing location > antrum
Distal stomach function > high motility, grinds food, prepares chyme for small intestine
stomach regions and stomach
Cardiac stomach
Secretes mucus and bicarbonate > protects tissue, control food entry, helps burping
Fundus and body
Secretes acid (H+), intrinsic factor, mucus, bicarbonate, pepsinogen, lipase
Functions as reservoir and maintains gentle pressure to move food
Antrum and pylorus
Secretes mucus and bicarbonate
Functions > mixing, grinding, sieving, controlling emptying
gastric secretory cells
Parietal cells
produce stomach acid (HCL) and intrinsic factor
Chief cells
Produce pepsinogen (protein digestion) and gastric lipase (fat digestion)
G cells
Release gastrin > hormone that stimulates acid production
D cells
Release somatostatin > hormone that slows acid production
ECL cells
Release histamine > stimulates acid production
Mucous neck cells
produce mucus and bicarbonate protect stomach lining
regulation of gastric acid secretion
H+/K+/ATPase (proton pump)
Located in parietal cells
Secretes H+ into stomach lumen
Rate limiting step of acid secretion
activators of acid secretion
Three main stimulators
Histamine > increase cAMP > PKA > increase acid
Gastrin > increase Ca 2+ > PKC > increase acid
Acetylcholine (Ach) > increase Ca 2+ > increase PKC > increase acid
Works synergistically for maximal acid secretion
inhibition
Somatostatin (from D cells)
Decrease cAMP
Inhibits proton pump
Decrease acid production
negative feedback
Self regulation
D cells sense increase H+ (low pH)
Release somatostatin
Result:
Prevents over-acidification
big picture
Gastric acid is controlled by a balance of stimulatory and inhibitory signals
The proton pump (H+/K+/ATPase) in parietal cells is the final step where all signals act
Stimulatory inputs
Histamine increases cAMP and stimulates the proton pump
Gastrin and acetylcholine increases intracellular calcium and enhance acid secretion
These signals work together to maximize acid production during a meal
Inhibitory control
Somatostatin is released from D cells when acidity is high
It inhibits the proton pump and decreases gastrin and histamine release
Negative feedback
Increased acid (low pH) triggers somatostatin release
This reduces further acid secretion and prevents excess acidity
Overall, acid production when needed but limited to protect stomach lining
vagus and neural control
Parasympathetic NS: controls motility, secretion, relaxation (rest and digest)
Receptive relaxation > esophagus stretch > inhibits proximal stomach smooth muscle
Adaptive relaxation > stomach stretch > inhibits smooth muscle to accommodate food
vasovagal reflex
Triggered by stomach distention and chemical stimuli (peptides, amino acids)
Mediated by the vagus nerve (afferent signals to brainstem, efferent signals back to stomach)
Functions:
Coordinates gastric motility (mixing, peristalsis)
Stimulates gastric secretion (acid, enzymes)
Promotes receptive relaxation of the fundus
Overall role:
Integrates neural control during the gastric phase to optimize digestion