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Heat-stable DNA polymerase
polymerase chain reaction (PCR)
Restriction enzymes (example: EcoRI)
digestion DNA
Horizontal gel electrophoresis box
running DNA gels
Vertical gel electrophoresis box
Running protein gels (PAGE)
DNA ligase
joining pieces of DNA
Measuring protein or DNA concentration
spectrophotometer
E. coli is an example of a eukaryote.
False
Cell theory states
All life forms are made from one or more cells.
Cells only arise from pre-existing cells.
The cell is the smallest form of life.
Ensure that all products meet standards of quality in manufacturing process.
Quality of Assurance (QA)
Identify candidate biopharmaceutical drugs.
Research and development
Make commercial quantities of a biopharmaceutical drug.
Manufactoring
Which bacterial cell component is commonly isolated and used to digest DNA?
Restriction enzyme
Which structure regulates the flow of molecules into and out of the cell?
Plasma membrane
Where is the energy in adenosine triphosphate (ATP)?
Phosphate bonds
Monoclonal antibodies for scientific research can be produced in human cells.
True
The bi-product carbon dioxide benefits the brewing and baking industries. Carbon dioxide is produced by microorganisms, usually yeast, that obtain their energy by:
Anaerobic respiration
Respiration is the breaking down of food molecules with the result of generating energy for the cell
True
Glucose is a:
Monosaccharide
Which solution is the most concentrated?
50 µg/µL
When DNA replicates, each original strand of DNA serves as a template for a new strand. This is called what type of replication?
Semi-conservative replication
The nucleotide strands of DNA are oriented in opposite directions in a structure that is described as:
Anti-parallel
Made of four nitrogenous bases and a double helix structure of repeating nucleotides
all DNA
Linear, very long pieces of DNA with many thousands of genes and contained in a nucleus
Eukaryotic DNA
Long, circular DNA with several thousand genes
prokaryotic DNA
Small rings of DNA with only a few genes and floating in the cytoplasm
Plasmid DNA
In DNA double helix, the two DNA chains are held together by:
Hydrogen bonds between the pair of bases
How do the DNA molecules in various species differ from one another?
The number of genes and non-coding regions.
Regarding the out of conformance water bath, select the most appropriate course of action for the technician.
Report the problem to QA or individual in charge of repair, and place an "Out of Service" label on the water bath.
Why are enzyme solutions always prepared using a buffered solvent at a specific pH?
A buffered solvent is resistant to fluctuations in pH, because it is made with a combination of a weak acid and its conjugate base. Enzymes lose function outside of a narrow pH range.
Why does increasing the temperature of the reactants increase the rate of a chemical reaction?
Heat energy causes the particles of the reactants to move faster, and therefore react with each other more frequently
Naturally occurring enzymes involved with DNA replication, and which are also used as tools in biotechnology, include:
DNA Polymerase and DNA Ligase
Primary (1⁰) structure
Amino acids linked together by peptide bonds
Secondary (2⁰) structure
Three dimensional polypetide with alpha helices and beta sheets due to hydrogen bonding
Tertiary (3⁰) structure
Final three dimensional 3D shape
Quaternary (4⁰) structure
Multipolypeptides forming a larger complex protein
Select the letter that represents the correct order of assembly in the cell:
amino acid, polypeptide, protein
Why does the rate of a chemical reaction increase with increasing temperature?
Increased temperature increases the frequency of collisions between molecules
If a structural gene's code is "TAC ATG CCC TTA ATC," what will the mRNA transcript be?
AUG UAC GGG AAU UAG
During the process of translation:
mRNA is translated into proteins.
Where does translation take place in prokaryotes?
At the ribosomes
Determining the presence of a specific protein
ELISA
Determining the size and purity of a specific protein
SDS PAGE
Determining the time period protein remains active
Stability
Determining the amount of a protein present
Spectrophotometer
Determining the protein's activity
Enzyme activity
Identification of a DNA sequence unique to a specific virus
Genetic
Genetically altered bacteria that can breakdown and consume oil
Enviromental
Genetically engineered crops that tolerate environmental stresses, such as extreme temperature
Agricultural
Genetically engineered cells that make treatments for disease
Biopharmeceutical
Which of the following are advantages to treating diabetics with genetically engineered human insulin, rather than pig or cow insulin?
There is less chance of an immune response to the human insulin.
Ethical issues are avoided concerning the use of animals.
It is a more efficient process to purify insulin from yeast or bacteria cultures than it is from animal organs
"Bioethics" is best described as:
The study of decision making as it applies to moral decisions that must be made due to advances in biology and technology.
Which of the following are permitted in the laboratory?
Eye glasses
Which of the following is NOT part of manufacturing a biopharmaceutical drug?
EPA review
cGMP is an abbreviation used in the pharmaceutical and biopharmaceutical industry, and stands for:
Current Good Manufacturing Practices
Which of the following is a critical function of Quality Assurance (QA) personnel?
Maintain and control documentation for regulatory compliance
The agency responsible for regulating biopharmaceutical drugs for use in humans is:
Food & Drug Administration (FDA)
What is the chance a child will be born with cystic fibrosis (a homozygous recessive trait (aa)) if both the mother and father are heterozygous (Aa)?
25% chance of having the disorder.
The observable traits of an organism are referred to as the:
Phenotype
If DNA segments changes from GGTTAG to GGATAG this is a:
Nucleotide base substitution
The type of cell division in which haploid gametes are produced is called
Meiosis
Humans have two copies of each chromosome, and therefore are:
Diploid
Carbohydrates
Example: Cellulose. Functions: Energy storage, receptors, structure of plant cell wall.
Proteins
Enzymes. function: Structure,receptors,transport
Nucleic acids
RNA.Functions :Information storage and transfer
Lipids
Example: Hormones. Functions: Membrane structure, energy storage, insulation.
Imagine you have been given a preparation of genomic DNA that contains a gene that you would like to transfer into a plasmid. On either side of the gene is a restriction site for the restriction enzyme EcoRI.
The genomic DNA has already been cut with the restriction enzyme HindIII, which does not cut with in the gene of interest. The plasmid has a single restriction site for EcoRI, but none for HindIII.
Which of the strategies below could be used for ligating the genomic DNA into the EcoRI site in the plasmid?
Cut the genomic DNA again with EcoRI and insert the DNA fragment into the plasmid cut with EcoRI.
How many grams is 2.6kg?
2600
Plasmid DNA is purified using anion exchange column chromatography. Why?
Because DNA is negatively charged, binds to the positively charged resin, and is eluted with increasing salt.
Following a restriction digest of plasmid DNA, you anticipate having of 4 DNA fragments that are very close in size (between 700 and 1000 bp). Which of the following will increase the chances for good separation on an agarose gel, so that you may visualize both bands on the gel?
Use a higher percentage of agarose (1.5 % or higher) when making the gel
Which of the following will change the resistance of the electrophoresis unit being run at a constant voltage?
Amount of buffer,
Thickness of agarose gel and
Percentage of agarose in gel
Which of the following principle(s) result in DNA molecules being separated on an agarose gel?
DNA moves toward the positive electrode due to negative charge of phosphate backbone and DNA fragments are separated in the gel matrix based on their size
The negative electrode terminal is located:
At the top of the gel (closest to wells)
Staining with Coomassie Blue
Visualizing proteins after PAGE
Adding loading dye to protein samples
Visualizing samples for loading into wells, and monitoring sample migration during PAGE
Adding a molecular weight (MW) standard to an empty well
Determining the relative sizes of the samples run during PAGE
Adding SDS to the sample buffer and the PAGE running buffer
Coating the sample proteins with an negative charge and denaturing them
To focus a specimen on a microscope, it is best to start with which objective?
Low power
The difference in hydrogen ion concentration between a solution of pH 4.00 and a solution of pH 6.00 is:
100-fold
How does a buffer resist pH change upon the addition of an acidic or basic components?
It reacts with the excess H+ or OH- ions in the solution
Below is a DNA sequence that you are trying to amplify from a genomic DNA sample. Evaluate the appropriateness of using the potential primer (below the DNA strand) to amplify the specific sequence of DNA.
Sequence of interest: 3'-ACATGCTGCTGCTGGTCACAAGTCAATTCCTAA-5'
Potential primer to the sequence: 5'-TGTACGACGACGAC-3'
This is a good primer because it is anti-parallel and no long repeats.
Using the steps listed below, put them in order to best describe the sequence of steps that occurs in a PCR cycle:
1. The primers hybridize to the target DNA.
2. The mixture is heated to a high temperature to denature the double stranded DNA.
3. DNA polymerase extends the primers to make a copy of the target DNA.
2,1,3
Polymerase Chain Reaction (PCR) uses which enzyme to "amplify" DNA?
DNA polymerase
Genetic Engineering is:
The alteration of an organism's genetic, or hereditary, material and Used to produce recombinant proteins for therapeutic use
A restriction enzyme digestion reaction contains which of the following ingredients?
DNA, Water, Buffer, Restriction Enzyme
If a linear piece of DNA has three restriction sites for EcoRI, into how many fragments will EcoRI cut that DNA?
4
How is the number 0.000052 correctly written in scientific notation?
5.2 x 10-5
What is 0.9851 rounded to three significant figures?
0.985
Scientific question
Ask a testable question
Hypothesis
A statement that attempts to answer the scientific question being posed
Experimental plan
Step-by-step instructions of how to test a scientific question
Conduct experiment
Perform experimental plan and repeat trials
Analyze and report data
Answer questions based on data collected during a valid experiment
A technician repeated the maltase reaction described above, but the water bath failed to reach 37°C (it only warmed to 30°C). Which of the selections below is the most likely outcome?
The enzyme activity would decrease, yielding the same level of glucose over a longer time period.
How does one amino acid differ from another?
R group
From DNA to RNA and RNA to protein, what nucleotide can change
U= RNA
What is the main function of lipids
store energy
What is a monnosaccaride that is commonly used for energy in cells
glucose
where in the cell does transcription take place (prokaryotic)
nucleus
Where in the cell does translation occur?
ribosomes
arobic respiration
Releasing energy with the use of oxygen