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What is the theory of spontaneous generation?
life arising from non life
What is a microbe?
How did Louis Pasteur disprove the spontaneous generation theory
The swan neck flask experiment
Who proposed germ theory?
Robert Koch
What are Koch’s postulates
The ‘rules’ of germ theory
The germ must be present in all affected subjects
It must be able to be grown in isolation
Once reintroduced from isolation, the microbe should cause the same disease
You should be able to re-isolate the microbe
What are the 2 kingdoms of prokaryotes?
Archaea and bacteria
What is the structure of prokaryotic DNA
haploid, circular DNA
How do bacteria asexually reproduce?
binary fission
What are the 2 potential structures in the prokaryotic genome?
circular chromosomes
small circular plasmid (1-5% of chromosome)
How many chromosomes can bacteria have?
1 or 2
What is a theta structure?
What is a cistron?
another word for a gene
What is an operon
a series of cistrons governed by a single operator and promoter
What is a polycistronic mRNA molecule?
What is horizontal gene transfer?
Donor cell DNA transfered to Recipient cell
Do horizontal gene transfers have to be between the same species?
No
What are the 3 main methods of horizontal gene tranfer?
Transformation, transduction, conjugation
What is transformation
Naked DNA from a ruptured cell is absorbed by an alive competent cell
What is condugation
the transfer of plasmid from one cell to another
What is competent bacteria?
bacteria which can undergo transformation by taking up DNA
Why can plasmids be conjugated?
hey often carry the genes that allow them to initiate and facilitate gene transfer
What is transduction?
When a bacteriophage incorporates bacteria A into its genome and then transfers it into bacteria B
How is peptidoglycan produced?
NAM is synthesized in the cytoplasm and binds to UDP
NAM is linked to bactoprenol
NAG is added to NAM
bactoprenol flips
NAM-NAG structures crosslink
bacterioprenol flips back
What catalyzes crosslinking in peptidoglycan formation?
transpeptidase
What binds during crosslinking in peptidoglycan formation?
Allenine
How does penicilin act?
inactivates transpeptidase
What is periplasm
What is lipopolysaccharide
What is lipid A
Released when a Gram-negative bacterium dies
Causes endotoxin shock (immune system overload)
Why doesn’t natural penicillin work in most Gram-negative infections?
It cannot pass through the outer membrane to irreversibly bind with transpeptidase
How does the gram stain work?
Stained purple with crystal violet
Alcohol removes stains from gram negatives
Re-stained pink/purple with safranin
What shape are cocus bacteria?
Spherical
What shape are bacillus bacteria?
rod shaped
What shape are vibrio bacteria?
comma shaped
What bacteria are named
Those which we can grow
When was the theory of spontaneous generation accepted until?
17th centaury
What does it mean for prokaryotic DNA to be “naked”
It doesn’t package into histones
Do prokaryotic genomes have introns?
no
What is the size of prokaryotic and eukaryotic ribosomes?
70S and 80S
Describe the chromosomes of bacteria
1-2, may be linear but typically circular, not membrane bound
What two structures are created when a bacterial chromosome is replicated?
replication fork and the theta structure
What do all genes under the same operon share?
The same promoter and operator
What do operons yield?
polycistronic mRNA
What is polycistronic mRNA and where does it come from?
a mRNA molecule containing multiple genes comes from an operon
What is a competent bacterium?
One which can uptake the free DNA via transformation
What unites Campylobacter, Enterococcus Faecalis, Clostridium Difficile?
They are all bad bacteria
What unites Bifidobacteria, Escherichia coli, Lactobacilli?
They are all beneficial bacteria
What are the functions of the bacterial cell wall?
Encloses the cell and forms the shape
Protects the cell from osmotic lysis
Water and nutrients are admitted through (porous structure)
Wastes are expelled
What are the 5 key players in peptidoglycan synthesis?
NAM, NAG, UDP, Bactoprenol, Transpeptidase
What is the main purpose of bactoprenol?
Allows for the flipping of peptidoglycan during synthesis
What is periplasm?
the gel-like space found between the inner and outer membranes of Gram-negative bacteria.
What are PBPs
penicillin binding proteins
Why are PBPs important?
They are responsible for cross linking the peptidoglycan
What is the component which Lipid A comes from?
Lipopolysaccharide
What is lipopolysaccharide and why is it important?
Apart of the gram negative cell wall, is composed of the endotoxin lipid A
What is gangrene?
Death of body tissue caused by lack of blood flow or bacterial infection
What form is natural penicillin?
PenG
Why does alcohol remove the crystal violet/iodine from gram positive but not gram negative bacteria?
Thick peptidoglycan layer retains the dye
Lipid rich outer layer shrinks and releases the dye
Why can some bacteria not stain with the gram stain
absence of a cell wall, different structures in the cell wall
What creates a bacterial genus?
group of closely related species
What creates a bacterial species?
strains sharing common features, while differing considerably from other strains
What is a communicable disease
• can be transferred from one individual to another
• also referred to as transmissible or infectious diseases
• caused by pathogens such as viruses and bacteria
What are non communicable diseases?
• diseases not transmitted from one person to another
• often referred to as lifestyle diseases
• cancers, diabetes, cardiovascular diseases, chronic
respiratory diseases
When did germ theory arise?
In the final decades of
the 19th century
Who proposed germ theory?
Robert Koch
What is a reservoir
typically harbors the infectious agent without injury to itself and may serve as a source from which hosts can be infected
What is horizontal pathogen transmission?
Transmission of a pathogen between members of a species
What is vertical pathogen transmission
Passing of a pathogen from parent to child
How does direct contact transmission occur?
skin to skin contact
How does direct droplet spread transmission occurr?
short-range aerosols produced by sneezing, coughing or even talking

How does indirect aerosol transmission occur?
carried by dust or droplet nuclei suspended in the air
How does indirect vehicle transmission occur?
through contaminated materials such as food and water
What is a biological vector?
carried within a live organisim
What is a mechanical vector?
carried on the surface/outside
What is zoonotic transmission?
Transmission between a human and an animal
What are some examples of vertical transmission?
HIV, gonorrhea, Rubella virus
What are some examples of horizontal transmission?
Corona virus, measles
How is MRSA spread in healthcare?
-Direct contact with an infected wound or from contaminated hands
-People who carry MRSA may have no signs of infection, but can still spread the bacteria to others
How do measles and TB spread?
Aerosol
How id meliodosis spread?
Soil bone organism
Can aerosolize
More prominent in the wet season
Can be zoonotic
How is Qld Tick Typhus spread?
biological vector transmission
How is Q-fever transmitted?
zoonosis
How is whooping cough transmitted?
Direct droplets
Define a pure culture
Only one strain of microorganism present
Why is agar suitable for pure culture generation?
Microbes cannot eat/digest agar
It is solid at 40-100C
How does Bordetella pertussis spread?
direct droplets
What does Bordetella pertussis cause?
Whooping cough
How is Treponema pallidum spread?
sexual transmission or congenital
What disease does Treponema pallidum cause?
Syphilis
What does Mycobacterium tuberculosis cause?
TB
How does Mycobacterium tuberculosis spread?
aerosols
What does Rickettsia australis cause
QLD tick typhus
How is Rickettsia australis spread?
biological vectors
What does Coxiella burnetii cause?
Q-fever
How does Coxiella burnetii spread?
zoonosis via contaminated aerosol inhalation
What is sterilization?
Destruction or removal of all microbial life inc. endospores
What is commercial sterilisation?
Sufficient heat treatment to kill endospores of Clostridium botulinum in canned food
What is disinfection?
Destruction of vegative pathogens on non-living surfaces
What is antisepsis?
Destruction of all vegetive pathogens on a living surface
What is sanitization?
Treatment to lower microbial counts on eating and drinking utensils