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biostatistics
the application of statistics in the heath related fields
epidemiology
the study of health and illness in human populations, or the patterns of health and disease and the factors that influence these patterns
evidence-based medicine
once we now the epidemiology of a disease, it is used to understand the cause of the disease, determine public health policy, and plan treatment
intervention
an investigator-controlled maneuver, such as a drug, a procedure, or a treatment
retrospective study
the nature of the inquiry is backward in time
prospective study
look forward in time
longitudinal study
the inquiry covers a period of time
case (experimental group)
individuals selected on the basis of some disease or outcome
control (control group)
individuals without the disease or outcome
cohort
a group of people who have something in common & who remain part of a group over an extended time
clinical trial
experimental studies in medicine that involve humans
controlled trial
studies in which the experimental drug or procedure is compared with another drug or procedure, sometimes a placebo and sometimes the previously accepted treatment
uncontrolled trial
studies in which the investigators' experience with the experimental drug or procedure is described, but the treatment is not compared with another treatment, at least not formally
concurrent control
to plan interventions for both groups for the same time period in the same study
double-blind trial
neither subjects nor investigators know whether the subject is in the treatment or the control greoup
blind trial
when only the subject is unaware, but researcher knows which group they belong to
hawthorne effect
people change their behavior and sometimes improve simply because they receive special attention by being in a study and not because of the study intervention
crossover study
two group of patients: one group is assigned the experimental treatment and the second group is assigned the placebo or control. after a time, the experimental treatment and placebo are withdrawn from both groups for a washout period. The groups then switch.
historical control
the controls are patients the investigator has previously treated in another manner, external to this study
meta-analysis
uses published information from other studies and combines the results so as to permit to an overall conclusion
representative (of a population)
a sample that accurately reflects the characteristics of the population as a whole
qualitative
data on a nominal scale, describes a quality of the person or thing studied
quantitative
the differences between numbers have meaning on a numerical scale, measures the quantity of something
rank order scale
observations are ranked from highest to lowest
mean
average of the observations
median
middle observation
mode
the value that occurs most frequently
bimodal
when the set of data has two modes
range
the difference between the largest and smallest observation
standard deviation
a measure of the spread of data about their mean
percentile
the percentage of a distribution that is equal to or below a particular number
interquartile range
the difference between the 25th and 75th percentile
frequency table
used to display quantitative data, show frequency in each category, and often percentiles
histogram
present the measure of interest along the X-axis and the number or percentage of observations along the y-axis
box plot
used to illustrate certain locations in the distribution
frequency polygon
line graphs similar to histograms, useful when comparing two distributions on the same graph
proportion
the number of observations with a given characteristic (A) divided by the total number of observations in a given group (A + B)
proportion = A/(A+B)
percentage
proportion multiplied by 100
ratio
the number of observations in a group with a given characteristic divided by the number of observations without the given characteristic
rate
similar to proportions, except that a multiplier is used, and they are computed over a specified period of time
mortality rate
provide a standard way to compare number of deaths occurring in different populations, deaths due to different diseases in the same population, or deaths at different periods of time
morbidity rate
number of individuals who develop a disease in a given period of time divided by the number of people in the population at risk
prevalence
the number of individuals with a given disease at a given point in time divided by the population at risk for that disease at that time
incidence
the number of new cases that have occurred during a given interval of time divided by the population at risk at the beginning of the time interval
contigency table
observations are classified according to several factors, used when two characteristics on a nominal scale are examined
bar chart
counts or percentages are shown in bars
correlation coefficient
one measure of the relationship between two numerical characteristics, symbolized by X and Y
spearman rank correlation
aka Spearman's rho; used to describe the relationship between two ordinal characteristics
relative risk
ratio of the incidence in people with the risk factor (exposed people) to the incidence in people without the risk factor (non-exposed people)
odds ratio
the odds that a person with an adverse outcome was risk divided by the odds that a person without an adverse outcome was at risk
absolute risk reduction
provides a way to assess the reduction in risk compared with the baseline risk
number needed to treat
in order to prevent one event
scatterplot
used to illustrate the relationship between two characteristics when both are measured on a numerical scale
when do you use a case-series study?
to track a small group of patients with a similar condition or treatment
what is the research question of a case-series study?
the author describes some interesting or intriguing observations that occurred for a small number of patients
how is the study set up for a case-series study?
not usually planned and do not involve any research hypotheses
who are the participants of case-series study?
small number of patients who share a similar disease, exposure, or clinical outcome
what type of data is obtained for a case-series study?
descriptive, observational date (usually both qualitative and quantitative)
how do you record the data in a case series study
tracking the clinical histories, treatments, and outcomes for a group of patients with a similar conditino
advantages of case-series study?
- they are easy to write
- the observations may be extremely useful to investigators designing a study to evaluate causes or explanations of the observations
disadvantages of case-series study?
- susceptible to many possible biases related to subject selection and characteristics observed
- in general, you should view them as hypothesis-generating and not as conclusive
When do you use case control studies?
when you begin with the absence or presence of an outcome and then look backward in time to try to detect possible causes or risk factors that may have been suggested in a case-series report
what is the research question in case-control study?
whether a specific exposure is associated with a particular health outcome or disease
how is the study set up in case control studies?
subjects in the study are chosen at the onset of the study after they are known to be either cases with the disease or outcome or controls without the disease or outcome
who are the participants in the case control studies?
divided into two distinct groups based entirely on whether or not they currently have the health outcome being studied
what type of data is obtained in the case control studies?
they obtain retrospective exposure and demographic data
how do they record data in the case control studies?
could be through interviews and questionnaires, medical records, and biological samples
advantages of case control studies?
- appropriate for studying rare diseases or events, for examining conditions that develop over a long time, and for investigating a preliminary hypothesis
- quickest and least expensive studies to undertake and are ideal for investigators who need to obtain some preliminary data prior to writing a proposal for a more complete, expensive and time-consuming study
disadvantages of a case control study?
- largest number of possible biases or errors, and they depend completely on high-quality existing records. Data availability for case control studies sometimes requires compromises between what research wish to study and what they are able to study
- selection of an appropriate control group. the cases in a case control study are relatively easy to identify, but deciding on a group of persons who provide a relevant comparison is more difficult
when do you use cross sectional studies?
to observe a population at a single point in time
what is the research question of a cross sectional study?
measuring the prevalence of a condition or identifying associations between variables at a single, specific point in time
how is the study set up in a cross sectional study?
analyze data collected on a group of subjects at one time rather than over a period of time
who are the participants of a cross sectional study?
individuals drawn from a specific population of interest at a single point in time
what type of data is obtained in a cross sectional study?
observational data at a single point in time
how do you record the data in a cross sectional study?
taking a snapshot of a population to measure exposures and outcomes at the same specific point in time
advantages of a cross sectional study?
- best for determining the status quo of a disease or condition, such as the prevalence of HIV in given populations, and for evaluating diagnostic procedures
- relatively quick to complete, and they may be relatively inexpensive as well
disadvantages of a cross section study?
- provide only a snapshot of time of the disease or process, which may result in misleading information if the research question is really one of disease process
- obtaining sufficiently large response rates; many people asked to participate in a survey decline because they are busy, not interested and so forth. The conclusions are, therefore, based on a subset of people who agree to participate, and these people may not be representative of or similar to the entire population
When do you use a cohort study?
when you ask a question looking forward in time
what is the research question of a cohort study?
whether a specific exposure increases or decreases the risk of a certain outcome over a set period of time
how is the study set up of a cohort study?
tracks a group of similar people over time to see how their exposures affect their likelihood of developing specific outcomes
Who are the participants in a cohort study?
a group of people who have something in common and who remain part of a group over an extended time
what type of data is obtained in a cohort study?
exposure and outcome data
how do you record the data of a cohort study?
developing a structured date dictionary and using a secure database to track variable, exposures, and outcomes over time
advantages of a cohort study?
they establish a clear temporal sequence - proving that an exposure occurred before the outcome developed
disadvantages of cohort study?
high costs, long timeframes, vulnerability to participant dropout, and inefficiency in studying rare disease
what are controlled trials?
studies in which the experimental drug or procedure is compared with another drug or procedure, sometimes a placebo and sometimes the previously accepted treatment
what are randomized controlled trials?
the epitome of all research designs because it provides the strongest evidence for concluding causation
what are nonrandomized trials?
studies that do not use randomized assignment
opened to many sources of bias, so their conclusions are highly questionable
what are trials with self-controls?
- Use the same group of subjects for both the experimental and control options
- "Before and after"
- Vulnerable to the Hawthorne effect
what are trials with external controls?
- Compare to the results of another investigator's research, or patients the same investigator has previously treated in another manner (historical controls)
- Often used to study diseases for which cures do not yet exist
- Must consider whether other factors may have changed since the time the historical controls were treated
what are uncontrolled studies?
a study involving interventions have controls, and by strict definition they are not really experiments or trials
what happens in a phase I trial?
Tests the drug in a few people for safety and adverse reactions and ascertains safe and unsafe doses (non-therapeutic).
- already researched for a while
- purpose is to determine basic safety, pharmacokinetic, and pharmalogic information
what happens in a phase II trial?
range from small, single-arm studies to randomized trials comparing a control treatment with the experimental drug in either a single dose or at several doses
- study subjects are the patient population that has the disorder of interest
what happens in a phase III trial?
-large clinical studies that can involve the treatment of several hundred subjects from multiple centers with a goal of assessing therapeutic benefit
- large number of patients allow for the development of a broad database of information about saftey and efficacy
- includes fixed dose studies, flexible dose studies, and studies that include the comparison of a gold standard treatment alnog with the experimental agent and placebo
- pivotal studies that will serve as the basis for FDA approval
what are phase IV clincal trials?
-initiated after a drug has been approved by the FDA
-postmarketing studies
nominal scales
name scale
used for the simplest level of measurement when data values fit into categories
it isnt measured, we count the number of observations with or without the attribute
ordinal scales
one is better than the other
observations are still classified, but are placed in order or more than or less than
used to determine a patient's amount of risk or the appropriate type of therapy
numerical scales
the differences between numbers have meaning on a numerical scale, measures the quantity of something
frequently displayed in a variety of tables and graphs
means and standard deviation are used to summarize the values