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Quorum sensing
Bacteria release signaling molecules; when concentration reaches a threshold, gene expression changes (e.g., biofilm formation).
Light microscopy (brightfield)
Resolution ~0.2 µm; used for general observation.
Dark-field microscopy
Useful for thin organisms like Treponema pallidum (syphilis)
Electron microscopy
SEM (surface detail), TEM (internal structures).
Resolving power (Resolution)
The ability to distinguish two nearby objects as separate
Unit conversions
1 nm = 10^-9 m; 50 nm = 0.050 µm; smallest unit here = nanometer.
Prokaryotes
No nucleus, single-celled, divide by binary fission.
Flagella
Motility; arrangement affects movement.
Fimbriae
Adhesion to surfaces (important for infection).
Pili
DNA transfer during conjugation.
Glycocalyx
Capsule (organized, virulent) vs slime layer (loose).
Functions of glycocalyx
Prevent desiccation, immune evasion, attachment.
Cell wall
Composed of peptidoglycan (NAG + NAM crosslinks).
Gram-negative bacteria
Outer membrane with LPS (lipid A = endotoxin).
Plasmids
Extra-chromosomal circular DNA; often carry resistance genes.
Psychrophiles
Grow in cold temperatures (refrigeration).
Mesophiles
Moderate temperatures (~37°C); most human pathogens.
Thermophiles
Grows in high temperatures.
Hyperthermophiles
Extreme heat (>70°C). Example: bacteria growing at 75°C = hyperthermophile.
Lag phase
Cells metabolically active, no division yet.
Log phase
Rapid cell division; most growth occurs here.
Stationary phase
Nutrients limited; growth = death.
Death phase
Cells die off.
Gram-positive
Thick peptidoglycan wall → Cell turns purple.
Gram-negative
Thin wall peptidoglycan wall + outer membrane → Cell turns pink/red.
Acid-fast stain
Identifies Mycobacterium (waxy mycolic acid walls)
Penicillins & cephalosporins
Inhibit peptidoglycan synthesis (cell wall).
Quinolones
Inhibit DNA replication.
Aminoglycosides, tetracyclines, chloramphenicol
Inhibit protein synthesis (ribosomes).
Polymyxin B, daptomycin
Disrupt the cell membrane.
Broad spectrum antibiotics
Effective against many bacteria.
Narrow spectrum antibiotics
Targets specific bacteria.
Chemotherapeutic index
Ratio of toxic dose to therapeutic dose; high = safer.
Beta-lactam antibiotics
Contain beta-lactam ring; destroyed by beta-lactamase enzymes.
Sulfonamides
Inhibit folic acid synthesis.
Side effects
Tetracyclines → tooth discoloration; chloramphenicol → gray syndrome.
Pathogenicity
The ability to cause disease.
Virulence
The degree of severity of disease.
Virulence factors
Capsules, enzymes, toxins, biofilms.
Hyaluronidase
Helps bacteria spread through tissues.
Coagulase
Forms clots protecting bacteria.
Exotoxins
Secreted proteins; highly potent.
Endotoxins
Lipid A of LPS in gram-negative bacteria.
Direct contact
Touching, kissing.
Indirect contact
Touching the same objects (Fomites)
Mechanical vectors
Insects carry pathogens externally.
Biological vectors
Pathogen develops inside vector.
Vehicle transmission
Water, food.
Vertical transmission
Mother to fetus.
Incubation
No symptoms.
Prodromal
Mild symptoms (fever, fatigue).
Illness
Severe symptoms.
Decline
Symptoms decrease.
Convalescence
Recovery.
Endemic
Constant presence in region.
Epidemic
Sudden increase in cases.
Pandemic
Worldwide spread.
Carrier
Individual who spreads disease without symptoms.
Normal microbiota
Beneficial bacteria; opportunistic pathogens cause disease when immunity is weakened.