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Oral Microbiome
Totality of the oral microbes, their genetic information, and the oral environment in which they interact
Oral microbiota
All living microbes constituting the oral microbiome
Oral Bacteriome
3 major sub division of oral microbiome
The total collection of bacteria and their genes within the mouth. This is the most studied and most abundant part of the oral microbiome
The “workforce”
Oral Mycobiome
3 major sub division of oral microbiome
Is the collection of fungi and yeasts in the oral cavity
The “fungi”
Oral Virobiome
3 major sub division of oral microbiome
Is the collection of all viruses in the mouth. This is often the most overlooked but arguably the most complex subdivision
The “regulators”
Mutans Group
Cultural characteristics: High, convex, opaque colonies; prroduce profuse extracellular polysaccharide in sucrose-containing medial; selective medium: MSA + bacitracin agar
Main intraoral sites and infections: Tooth surfaces, dental caries
Salivarius Group
Cultural characteristics: Large, mucoid colonies on MSA due to the production of extracellular fructans.
Main Intraoral sites and infections: Dorsum of the tongue and saliva, streptococcus vestibularis mainly reside in the vestibular mucosa, not a major opportunistic pathogen
Planktonic Phase Organism
Suspended in Saliva
Biofilm Phase
Attached to oral surfaces, plaque
Gram Positive Cocci: Genus Streptococcus
Predominant supragingival bacteria
Chains, non-motile, fibrils
Occasionally capsulated
Facultative anaerobes
Variable haemolysis
Selective medium: mitis salivarius agar
Mutans Group
Main species: Streptococcus
Main intraoral sites and infections:
Tooth surface, dental caries
Salivarius Group
Main species: Streptococcus
Main intraoral sites and infections:
Dorsum of the tongue and saliva
S. vestibularis mainly reside in the vestibular mucosa
Not a mojor opportunistic pathogen
Anginosus Group
Main species: S. constellatus, S. intermedius
Main intraoral sites and infection:
Gingival crevices
Dentoalveolar and endodontic infections
Mitis Group
Main species: S. sanguinis, S. gordonii, etc.
Main intraoral sites and infections:
Dental plaque biofilms, tongue and cheeks, dental caries
Infective endocarditis
Genus Stomatococcus
Forms large colonies adherent to blood agar surface, facultative anaerobes
Tongue mainly, gingival crevices
Not a major opportunisitic pathogen
Genus Granulicatella
Previously termed “nutritionally variant streptococci”
Non-motile, catalase and oxidase negative, non-spore forming, facultatively anaerobic requiring pyridoxal or I-cysteine for growth
Normal oral flora
Inhabits plaque biofilms, periodontal pockets, and root canals
Cause serious infections (infective endocarditis)
Genus Actinomyces
Rods & Filaments
Ferments glucose to give characteristic patterns of short chain carboxylic acids useful for speciating, facultative anaerobes
Earliest stages of enamel demineralization and the progression of small caries lesions
Opportunistic pathogen causing cervicofacial
Genus Lactobacillus
Rods & Filaments
Catalase-negative, microaerophilic
Common oral inhabitants
Dental plaque biofilms
Used to detect the cariogenic potential of the diet
Genus Eubacterium
Rods and Filaments
Obligatory anaerobes
Plaque biofilms and calculus
Implicated in caries and periodontal disease
Comprise over 50% of the anaerobes of periodontal pockets
“Corn-cob” formation in dental plaque
Genus Propionibacterium
Rods & Filaments
Strict anaerobe, morphologically indistinguisable from actinomyces but produces propionic acid from glucose
Root surface caries, plaque biofilms
Dentoalveolar infections
Rothia Dentocariosa
Gram-positive branching filament, is a strict aerobe
Found in plaque and infectiv endocarditis
Bifidobacterium dentium
Gram-positive strict anaerobe
Regularly isolated from plaque biofilms