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Haplotype
Linked combinations of SNPs that tend to be inherited together on a piece of DNA
Recombination doesn’t always happen at the same place, so overtime many recombination events happening to these chromosomes will cause the…
‘blocks’ on red or blue to identity to shrink over generations
What happens to the haplotypes as generational time progresses?
Get shorter and shorter until they reach a point of equilibrium
What haplotypes are very informative for evolutionary history due to sex specific inheritance?
Mitochondrial and Y-chromosome
The SNPs that make up a haplotype are said to be…
“linked” with one another because they are often inherited together
New mutations can define new…
sub-haplotypes
Haplotype group
a group of individuals of a species that shares a haplotype(s)
Admixture
Or gene flow, is the transfer of DNA between different populations/closely related species via recombination (typically)
What two population structures give similar patterns of inheritance?
Admixture and ancestral population
In the case of recent ancestry, we expect the tracts of admixture to be relatively long. Why is this?
Because recombination has not had a chance to break up the admixed haplotype blocks yet
In ancient ancestry we expect to find…
smaller haplotype blocks because recombination has broken these regions down